RNA–Protein interactions for RNA: ENST00000525209.5

CD44-213, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 4

Gene CD44, Length 574 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-213ENST00000525209 SNRPD2P62316 118 aaKnown RBP3.42□□□□□ -1.86
CD44-213ENST00000525209 ARFRP1Q13795 201 aa3.42□□□□□ -1.86
CD44-213ENST00000525209 FCN2Q15485 313 aa3.42□□□□□ -1.86
CD44-213ENST00000525209 ZNF404Q494X3 552 aa3.42□□□□□ -1.86
CD44-213ENST00000525209 RNASE10Q5GAN6 216 aaKnown RBP3.42□□□□□ -1.86
CD44-213ENST00000525209 OR2B11Q5JQS5 317 aa3.42□□□□□ -1.86
CD44-213ENST00000525209 FBXW12Q6X9E4 464 aa3.42□□□□□ -1.86
CD44-213ENST00000525209 ZNF615Q8N8J6 731 aa3.42□□□□□ -1.86
CD44-213ENST00000525209 ZIC4Q8N9L1 334 aa3.42□□□□□ -1.86
CD44-213ENST00000525209 RXFP4Q8TDU9 374 aa3.42□□□□□ -1.86
CD44-213ENST00000525209 GPR119Q8TDV5 335 aa3.42□□□□□ -1.86
CD44-213ENST00000525209 THEM6Q8WUY1 208 aa3.42□□□□□ -1.86
CD44-213ENST00000525209 CANT1Q8WVQ1 401 aa3.42□□□□□ -1.86
CD44-213ENST00000525209 PTX4Q96A99 478 aa3.42□□□□□ -1.86
CD44-213ENST00000525209 GPR146Q96CH1 333 aa3.42□□□□□ -1.86
CD44-213ENST00000525209 PLEKHB2Q96CS7 222 aa3.42□□□□□ -1.86
CD44-213ENST00000525209 FXYD5Q96DB9 178 aa3.42□□□□□ -1.86
CD44-213ENST00000525209 NEURL3Q96EH8 262 aa3.42□□□□□ -1.86
CD44-213ENST00000525209 SLC25A44Q96H78 314 aaPredicted RBP3.42□□□□□ -1.86
CD44-213ENST00000525209 OR7D2Q96RA2 312 aa3.42□□□□□ -1.86
CD44-213ENST00000525209 LYSMD1Q96S90 227 aa3.42□□□□□ -1.86
CD44-213ENST00000525209 TMEM70Q9BUB7 260 aa3.42□□□□□ -1.86
CD44-213ENST00000525209 LRRC61Q9BV99 259 aa3.42□□□□□ -1.86
CD44-213ENST00000525209 TBL1XR1Q9BZK7 514 aa3.42□□□□□ -1.86
CD44-213ENST00000525209 CHST6Q9GZX3 395 aa3.42□□□□□ -1.86
CD44-213ENST00000525209 ZBP1Q9H171 429 aa3.42□□□□□ -1.86
CD44-213ENST00000525209 NOX3Q9HBY0 568 aa3.42□□□□□ -1.86
CD44-213ENST00000525209 CALML5Q9NZT1 146 aa3.42□□□□□ -1.86
CD44-213ENST00000525209 TMEM216Q9P0N5 145 aa3.42□□□□□ -1.86
CD44-213ENST00000525209 ADAMTSL1Q8N6G6 1762 aa3.42□□□□□ -1.86
CD44-213ENST00000525209 ADAMTS7Q9UKP4 1686 aa3.42□□□□□ -1.86
CD44-213ENST00000525209 DOCK3Q8IZD9 2030 aa3.41□□□□□ -1.86
CD44-213ENST00000525209 ABCC12Q96J65 1359 aa3.41□□□□□ -1.86
CD44-213ENST00000525209 MYH15Q9Y2K3 1946 aa3.41□□□□□ -1.86
CD44-213ENST00000525209 TRAV36DV7A0A075B6V5 113 aa3.41□□□□□ -1.86
CD44-213ENST00000525209 IGHV6-1A0A0B4J1U7 121 aa3.41□□□□□ -1.86
CD44-213ENST00000525209 IGHV2-26A0A0B4J1V2 119 aa3.41□□□□□ -1.86
CD44-213ENST00000525209 LOC389332A0A1B0GUA5 103 aa3.41□□□□□ -1.86
CD44-213ENST00000525209 RPL37AP8A6NKH3 93 aa3.41□□□□□ -1.86
CD44-213ENST00000525209 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP3.41□□□□□ -1.86
CD44-213ENST00000525209 SAP18O00422 153 aaKnown RBP3.41□□□□□ -1.86
CD44-213ENST00000525209 RGS5O15539 181 aa3.41□□□□□ -1.86
CD44-213ENST00000525209 KBTBD11O94819 623 aa3.41□□□□□ -1.86
CD44-213ENST00000525209 NDUFC2O95298 119 aa3.41□□□□□ -1.86
CD44-213ENST00000525209 CD48P09326 243 aa3.41□□□□□ -1.86
CD44-213ENST00000525209 CPMP14384 443 aa3.41□□□□□ -1.86
CD44-213ENST00000525209 ORM2P19652 201 aa3.41□□□□□ -1.86
CD44-213ENST00000525209 EMP1P54849 157 aa3.41□□□□□ -1.86
CD44-213ENST00000525209 SYNJ2BPP57105 145 aa3.41□□□□□ -1.86
CD44-213ENST00000525209 TAS2R19P59542 299 aa3.41□□□□□ -1.86
CD44-213ENST00000525209 COL10A1Q03692 680 aa3.41□□□□□ -1.86
CD44-213ENST00000525209 TMEM267Q0VDI3 215 aaPredicted RBP3.41□□□□□ -1.86
CD44-213ENST00000525209 DAZ2Q13117 558 aaKnown RBP3.41□□□□□ -1.86
CD44-213ENST00000525209 HNRNPA0Q13151 305 aaKnown RBP3.41□□□□□ -1.86
CD44-213ENST00000525209 SRSF7Q16629 238 aaKnown RBP eCLIP3.41□□□□□ -1.86
CD44-213ENST00000525209 MORN5Q5VZ52 161 aa3.41□□□□□ -1.86
CD44-213ENST00000525209 ZNF343Q6P1L6 599 aa3.41□□□□□ -1.86
CD44-213ENST00000525209 DAZ4Q86SG3 579 aaKnown RBP3.41□□□□□ -1.86
CD44-213ENST00000525209 ZNF589Q86UQ0 364 aaPredicted RBP3.41□□□□□ -1.86
CD44-213ENST00000525209 C11orf53Q8IXP5 236 aa3.41□□□□□ -1.86
CD44-213ENST00000525209 ZNF519Q8TB69 540 aa3.41□□□□□ -1.86
CD44-213ENST00000525209 MBD3L1Q8WWY6 194 aa3.41□□□□□ -1.86
CD44-213ENST00000525209 OR5P3Q8WZ94 311 aa3.41□□□□□ -1.86
CD44-213ENST00000525209 GPR82Q96P67 336 aa3.41□□□□□ -1.86
CD44-213ENST00000525209 LINC01587Q99440 93 aa3.41□□□□□ -1.86
CD44-213ENST00000525209 TMEM147Q9BVK8 224 aa3.41□□□□□ -1.86
CD44-213ENST00000525209 OR52D1Q9H346 318 aa3.41□□□□□ -1.86
CD44-213ENST00000525209 ZNF702PQ9H963 129 aa3.41□□□□□ -1.86
CD44-213ENST00000525209 DAZ1Q9NQZ3 744 aaKnown RBP3.41□□□□□ -1.86
CD44-213ENST00000525209 DAZ3Q9NR90 486 aaKnown RBP3.41□□□□□ -1.86
CD44-213ENST00000525209 AIG1Q9NVV5 245 aa3.41□□□□□ -1.86
CD44-213ENST00000525209 INSIG2Q9Y5U4 225 aa3.41□□□□□ -1.86
CD44-213ENST00000525209 HEBP2Q9Y5Z4 205 aa3.41□□□□□ -1.86
CD44-213ENST00000525209 PRSS21Q9Y6M0 314 aa3.41□□□□□ -1.86
CD44-213ENST00000525209 TRIOBPQ9H2D6 2365 aa3.41□□□□□ -1.86
CD44-213ENST00000525209 IGLV4-3A0A075B6K6 122 aa3.4□□□□□ -1.87
CD44-213ENST00000525209 IGKV1-27A0A075B6S5 117 aa3.4□□□□□ -1.87
CD44-213ENST00000525209 CCL15-CCL14A0A0B4J2E2 113 aa3.4□□□□□ -1.87
CD44-213ENST00000525209 IGHV3-16A0A0C4DH30 117 aa3.4□□□□□ -1.87
CD44-213ENST00000525209 C5orf63A6NC05 138 aa3.4□□□□□ -1.87
CD44-213ENST00000525209 KNCNA6PVL3 124 aa3.4□□□□□ -1.87
CD44-213ENST00000525209 K7ERU9 68 aa3.4□□□□□ -1.87
CD44-213ENST00000525209 SS18L1O75177 396 aaPredicted RBP3.4□□□□□ -1.87
CD44-213ENST00000525209 SUPT7LO94864 414 aa3.4□□□□□ -1.87
CD44-213ENST00000525209 DUS4LO95620 317 aaKnown RBP3.4□□□□□ -1.87
CD44-213ENST00000525209 IGHV3-48P01763 117 aa3.4□□□□□ -1.87
CD44-213ENST00000525209 CSN2P05814 226 aa3.4□□□□□ -1.87
CD44-213ENST00000525209 TSPAN19P0C672 248 aa3.4□□□□□ -1.87
CD44-213ENST00000525209 METTL15P1P0C7V9 234 aa3.4□□□□□ -1.87
CD44-213ENST00000525209 GATA2P23769 480 aaPredicted RBP3.4□□□□□ -1.87
CD44-213ENST00000525209 LMO2P25791 158 aa3.4□□□□□ -1.87
CD44-213ENST00000525209 BLVRBP30043 206 aaPredicted RBP3.4□□□□□ -1.87
CD44-213ENST00000525209 POLR2IP36954 125 aaKnown RBP3.4□□□□□ -1.87
CD44-213ENST00000525209 RBP2P50120 134 aa3.4□□□□□ -1.87
CD44-213ENST00000525209 WNT4P56705 351 aa3.4□□□□□ -1.87
CD44-213ENST00000525209 TNFAIP6P98066 277 aaPredicted RBP3.4□□□□□ -1.87
CD44-213ENST00000525209 IFITM3Q01628 133 aa3.4□□□□□ -1.87
CD44-213ENST00000525209 REG3AQ06141 175 aa3.4□□□□□ -1.87
CD44-213ENST00000525209 BAMBIQ13145 260 aa3.4□□□□□ -1.87
CD44-213ENST00000525209 ERCC8Q13216 396 aa3.4□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms