RNA–Protein interactions for RNA: ENST00000524922.1

CD44-212, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 352 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-212ENST00000524922 NICN1Q9BSH3 213 aa1.01□□□□□ -2.25
CD44-212ENST00000524922 PAXXQ9BUH6 204 aa1.01□□□□□ -2.25
CD44-212ENST00000524922 Q9H3A6 140 aa1.01□□□□□ -2.25
CD44-212ENST00000524922 RIMS4Q9H426 269 aaPredicted RBP1.01□□□□□ -2.25
CD44-212ENST00000524922 RIBC2Q9H4K1 309 aa1.01□□□□□ -2.25
CD44-212ENST00000524922 C5orf66Q9H5L9 145 aa1.01□□□□□ -2.25
CD44-212ENST00000524922 MEPEQ9NQ76 525 aaPredicted RBP1.01□□□□□ -2.25
CD44-212ENST00000524922 BABAM2Q9NXR7 383 aa1.01□□□□□ -2.25
CD44-212ENST00000524922 TMEM216Q9P0N5 145 aa1.01□□□□□ -2.25
CD44-212ENST00000524922 PSMC3IPQ9P2W1 217 aaPredicted RBP1.01□□□□□ -2.25
CD44-212ENST00000524922 ZNF221Q9UK13 617 aa1.01□□□□□ -2.25
CD44-212ENST00000524922 PYCARDQ9ULZ3 195 aa1.01□□□□□ -2.25
CD44-212ENST00000524922 MGAT4AQ9UM21 535 aa1.01□□□□□ -2.25
CD44-212ENST00000524922 SLC22A13Q9Y226 551 aa1.01□□□□□ -2.25
CD44-212ENST00000524922 ANGPT4Q9Y264 503 aa1.01□□□□□ -2.25
CD44-212ENST00000524922 ST3GAL6Q9Y274 331 aa1.01□□□□□ -2.25
CD44-212ENST00000524922 UTP11Q9Y3A2 253 aaKnown RBP1.01□□□□□ -2.25
CD44-212ENST00000524922 MED31Q9Y3C7 131 aa1.01□□□□□ -2.25
CD44-212ENST00000524922 FBXO7Q9Y3I1 522 aa1.01□□□□□ -2.25
CD44-212ENST00000524922 NUBP2Q9Y5Y2 271 aa1.01□□□□□ -2.25
CD44-212ENST00000524922 FSIP2Q5CZC0 6907 aa1□□□□□ -2.25
CD44-212ENST00000524922 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP1□□□□□ -2.25
CD44-212ENST00000524922 TRBV9A0A0B4J1U6 114 aa1□□□□□ -2.25
CD44-212ENST00000524922 IGHV7-81A0A0B4J1V7 117 aa1□□□□□ -2.25
CD44-212ENST00000524922 IGHV1-3A0A0C4DH29 117 aa1□□□□□ -2.25
CD44-212ENST00000524922 PQLC2LA1A4F0 135 aa1□□□□□ -2.25
CD44-212ENST00000524922 ODAMA1E959 279 aa1□□□□□ -2.25
CD44-212ENST00000524922 OR4C46A6NHA9 309 aa1□□□□□ -2.25
CD44-212ENST00000524922 OR5H14A6NHG9 310 aa1□□□□□ -2.25
CD44-212ENST00000524922 FAM183AA6NL82 134 aa1□□□□□ -2.25
CD44-212ENST00000524922 RFPL4AA6NLU0 287 aa1□□□□□ -2.25
CD44-212ENST00000524922 FOXI3A8MTJ6 420 aaPredicted RBP1□□□□□ -2.25
CD44-212ENST00000524922 EVPLLA8MZ36 301 aa1□□□□□ -2.25
CD44-212ENST00000524922 RFPL4AL1F8VTS6 287 aa1□□□□□ -2.25
CD44-212ENST00000524922 K7EMT4 169 aa1□□□□□ -2.25
CD44-212ENST00000524922 TOR1AO14656 332 aa1□□□□□ -2.25
CD44-212ENST00000524922 SLC22A1O15245 554 aa1□□□□□ -2.25
CD44-212ENST00000524922 RER1O15258 196 aa1□□□□□ -2.25
CD44-212ENST00000524922 BIRC5O15392 142 aa1□□□□□ -2.25
CD44-212ENST00000524922 NBR2O15453 112 aa1□□□□□ -2.25
CD44-212ENST00000524922 RS1O15537 224 aa1□□□□□ -2.25
CD44-212ENST00000524922 ORC5O43913 435 aa1□□□□□ -2.25
CD44-212ENST00000524922 CREBL2O60519 120 aaPredicted RBP1□□□□□ -2.25
CD44-212ENST00000524922 MRPS14O60783 128 aaKnown RBP1□□□□□ -2.25
CD44-212ENST00000524922 ZNF254O75437 659 aa1□□□□□ -2.25
CD44-212ENST00000524922 GATBO75879 557 aaKnown RBP1□□□□□ -2.25
CD44-212ENST00000524922 DHRS3O75911 302 aa1□□□□□ -2.25
CD44-212ENST00000524922 IGKV1D-33P01593 117 aa1□□□□□ -2.25
CD44-212ENST00000524922 IGKV1-33P01594 117 aa1□□□□□ -2.25
CD44-212ENST00000524922 GLAP06280 429 aa1□□□□□ -2.25
CD44-212ENST00000524922 CCL3L1P16619 93 aa1□□□□□ -2.25
CD44-212ENST00000524922 LBPP18428 481 aa1□□□□□ -2.25
CD44-212ENST00000524922 COX7A1P24310 79 aa1□□□□□ -2.25
CD44-212ENST00000524922 CDK2P24941 298 aa1□□□□□ -2.25
CD44-212ENST00000524922 NPY1RP25929 384 aa1□□□□□ -2.25
CD44-212ENST00000524922 FGF9P31371 208 aaPredicted RBP1□□□□□ -2.25
CD44-212ENST00000524922 PYCR1P32322 319 aa1□□□□□ -2.25
CD44-212ENST00000524922 MC5RP33032 325 aa1□□□□□ -2.25
CD44-212ENST00000524922 VHLP40337 213 aa1□□□□□ -2.25
CD44-212ENST00000524922 AQP2P41181 271 aa1□□□□□ -2.25
CD44-212ENST00000524922 OR3A1P47881 315 aa1□□□□□ -2.25
CD44-212ENST00000524922 POLR2JP52435 117 aaKnown RBP1□□□□□ -2.25
CD44-212ENST00000524922 RAB25P57735 213 aa1□□□□□ -2.25
CD44-212ENST00000524922 ADARB1P78563 741 aaKnown RBP1□□□□□ -2.25
CD44-212ENST00000524922 FMODQ06828 376 aa1□□□□□ -2.25
CD44-212ENST00000524922 RIPPLY1Q0D2K3 151 aa1□□□□□ -2.25
CD44-212ENST00000524922 KRR1Q13601 381 aaKnown RBP1□□□□□ -2.25
CD44-212ENST00000524922 PTGES3Q15185 160 aaKnown RBP1□□□□□ -2.25
CD44-212ENST00000524922 ECSCRQ19T08 205 aa1□□□□□ -2.25
CD44-212ENST00000524922 C5orf64Q2M2E5 130 aa1□□□□□ -2.25
CD44-212ENST00000524922 DEFB136Q30KP8 78 aa1□□□□□ -2.25
CD44-212ENST00000524922 ACOT6Q3I5F7 207 aaPredicted RBP1□□□□□ -2.25
CD44-212ENST00000524922 ZBED5Q49AG3 693 aa1□□□□□ -2.25
CD44-212ENST00000524922 IFI44LQ53G44 452 aa1□□□□□ -2.25
CD44-212ENST00000524922 CLVS2Q5SYC1 327 aa1□□□□□ -2.25
CD44-212ENST00000524922 GLYATL3Q5SZD4 288 aa1□□□□□ -2.25
CD44-212ENST00000524922 METTL21CQ5VZV1 264 aa1□□□□□ -2.25
CD44-212ENST00000524922 ZNF57Q68EA5 555 aaPredicted RBP1□□□□□ -2.25
CD44-212ENST00000524922 ELP2Q6IA86 826 aa1□□□□□ -2.25
CD44-212ENST00000524922 ERICH5Q6P6B1 374 aa1□□□□□ -2.25
CD44-212ENST00000524922 C10orf99Q6UWK7 81 aa1□□□□□ -2.25
CD44-212ENST00000524922 RBPMS2Q6ZRY4 209 aaKnown RBP1□□□□□ -2.25
CD44-212ENST00000524922 SLC25A48Q6ZT89 311 aaKnown RBP1□□□□□ -2.25
CD44-212ENST00000524922 MBOAT2Q6ZWT7 520 aa1□□□□□ -2.25
CD44-212ENST00000524922 UTS2BQ765I0 119 aa1□□□□□ -2.25
CD44-212ENST00000524922 TRMT10CQ7L0Y3 403 aaKnown RBP1□□□□□ -2.25
CD44-212ENST00000524922 COX8CQ7Z4L0 72 aa1□□□□□ -2.25
CD44-212ENST00000524922 OAFQ86UD1 273 aa1□□□□□ -2.25
CD44-212ENST00000524922 CLECL1Q8IZS7 167 aa1□□□□□ -2.25
CD44-212ENST00000524922 OR5AS1Q8N127 324 aa1□□□□□ -2.25
CD44-212ENST00000524922 OR6V1Q8N148 313 aa1□□□□□ -2.25
CD44-212ENST00000524922 C10orf111Q8N326 155 aa1□□□□□ -2.25
CD44-212ENST00000524922 PRSS35Q8N3Z0 413 aa1□□□□□ -2.25
CD44-212ENST00000524922 LINC00471Q8N535 108 aa1□□□□□ -2.25
CD44-212ENST00000524922 Q8NAQ8 132 aa1□□□□□ -2.25
CD44-212ENST00000524922 BHLHE23Q8NDY6 225 aa1□□□□□ -2.25
CD44-212ENST00000524922 OR8B12Q8NGG6 310 aa1□□□□□ -2.25
CD44-212ENST00000524922 OR51T1Q8NGJ9 327 aa1□□□□□ -2.25
CD44-212ENST00000524922 OR2T4Q8NH00 348 aa1□□□□□ -2.25
CD44-212ENST00000524922 OR56B4Q8NH76 319 aa1□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms