RNA–Protein interactions for RNA: ENST00000523541.1

CCNC-213, Transcript of cyclin C, humanhuman

TSL 1 (best)

Gene CCNC, Length 1,123 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNC-213ENST00000523541 LCNL1Q6ZST4 164 aa13.49□□□□□ -0.25
CCNC-213ENST00000523541 C4orf3Q8WVX3 66 aa13.49□□□□□ -0.25
CCNC-213ENST00000523541 DUX3Q96PT4 197 aa13.49□□□□□ -0.25
CCNC-213ENST00000523541 PARP11Q9NR21 331 aa13.49□□□□□ -0.25
CCNC-213ENST00000523541 SDHAF2Q9NX18 166 aa13.49□□□□□ -0.25
CCNC-213ENST00000523541 RHBDL2Q9NX52 303 aa13.49□□□□□ -0.25
CCNC-213ENST00000523541 ZNF230Q9UIE0 474 aaPredicted RBP13.49□□□□□ -0.25
CCNC-213ENST00000523541 RBM7Q9Y580 266 aaKnown RBP13.49□□□□□ -0.25
CCNC-213ENST00000523541 NUBP2Q9Y5Y2 271 aa13.49□□□□□ -0.25
CCNC-213ENST00000523541 LOC100506127A0A0U1RQW1 187 aa13.48□□□□□ -0.25
CCNC-213ENST00000523541 M0R1X1 148 aa13.48□□□□□ -0.25
CCNC-213ENST00000523541 ATP6V0E1O15342 81 aa13.48□□□□□ -0.25
CCNC-213ENST00000523541 HOXD3P31249 432 aaPredicted RBP13.48□□□□□ -0.25
CCNC-213ENST00000523541 RPS16P62249 146 aaKnown RBP13.48□□□□□ -0.25
CCNC-213ENST00000523541 RUNX1Q01196 453 aa13.48□□□□□ -0.25
CCNC-213ENST00000523541 PSG5Q15238 335 aa13.48□□□□□ -0.25
CCNC-213ENST00000523541 ZNF260Q3ZCT1 412 aa13.48□□□□□ -0.25
CCNC-213ENST00000523541 DEFB121Q5J5C9 76 aa13.48□□□□□ -0.25
CCNC-213ENST00000523541 PYHIN1Q6K0P9 492 aa13.48□□□□□ -0.25
CCNC-213ENST00000523541 CNIH2Q6PI25 160 aa13.48□□□□□ -0.25
CCNC-213ENST00000523541 H1FOOQ8IZA3 346 aaPredicted RBP13.48□□□□□ -0.25
CCNC-213ENST00000523541 DRAXINQ8NBI3 349 aaPredicted RBP13.48□□□□□ -0.25
CCNC-213ENST00000523541 TSPAN14Q8NG11 270 aa13.48□□□□□ -0.25
CCNC-213ENST00000523541 OR2D2Q9H210 308 aa13.48□□□□□ -0.25
CCNC-213ENST00000523541 FBXL15Q9H469 300 aa13.48□□□□□ -0.25
CCNC-213ENST00000523541 SMIM30A4D0T7 59 aa13.47□□□□□ -0.25
CCNC-213ENST00000523541 IGKV1-16P04430 117 aa13.47□□□□□ -0.25
CCNC-213ENST00000523541 SNRPBP14678 240 aaKnown RBP13.47□□□□□ -0.25
CCNC-213ENST00000523541 CD40LGP29965 261 aa13.47□□□□□ -0.25
CCNC-213ENST00000523541 RAB9AP51151 201 aa13.47□□□□□ -0.25
CCNC-213ENST00000523541 GNG2P59768 71 aa13.47□□□□□ -0.25
CCNC-213ENST00000523541 MXD1Q05195 221 aa13.47□□□□□ -0.25
CCNC-213ENST00000523541 EGFEM1PQ0D2K5 195 aa13.47□□□□□ -0.25
CCNC-213ENST00000523541 ZNF491Q8N8L2 437 aa13.47□□□□□ -0.25
CCNC-213ENST00000523541 OR5M8Q8NGP6 311 aa13.47□□□□□ -0.25
CCNC-213ENST00000523541 LGALS14Q8TCE9 139 aa13.47□□□□□ -0.25
CCNC-213ENST00000523541 ABHD5Q8WTS1 349 aa13.47□□□□□ -0.25
CCNC-213ENST00000523541 RAX2Q96IS3 184 aa13.47□□□□□ -0.25
CCNC-213ENST00000523541 ST6GALNAC5Q9BVH7 336 aa13.47□□□□□ -0.25
CCNC-213ENST00000523541 DIABLOQ9NR28 239 aa13.47□□□□□ -0.25
CCNC-213ENST00000523541 SLC35D1Q9NTN3 355 aa13.47□□□□□ -0.25
CCNC-213ENST00000523541 METTL1Q9UBP6 276 aaKnown RBP13.47□□□□□ -0.25
CCNC-213ENST00000523541 VSIG4Q9Y279 399 aa13.47□□□□□ -0.25
CCNC-213ENST00000523541 WSB1Q9Y6I7 421 aa13.47□□□□□ -0.25
CCNC-213ENST00000523541 G3V318 75 aa13.46□□□□□ -0.25
CCNC-213ENST00000523541 KIAA0141Q14154 515 aaPredicted RBP13.46□□□□□ -0.25
CCNC-213ENST00000523541 RTL8BQ17RB0 113 aa13.46□□□□□ -0.25
CCNC-213ENST00000523541 DEFB136Q30KP8 78 aa13.46□□□□□ -0.25
CCNC-213ENST00000523541 C19orf54Q5BKX5 351 aa13.46□□□□□ -0.25
CCNC-213ENST00000523541 IDNKQ5T6J7 187 aa13.46□□□□□ -0.25
CCNC-213ENST00000523541 MAFIPQ8WZ33 124 aa13.46□□□□□ -0.25
CCNC-213ENST00000523541 TMEM68Q96MH6 324 aa13.46□□□□□ -0.25
CCNC-213ENST00000523541 SPATA2Q9UM82 520 aa13.46□□□□□ -0.25
CCNC-213ENST00000523541 FOXA2Q9Y261 457 aaPredicted RBP13.46□□□□□ -0.25
CCNC-213ENST00000523541 OR2W1Q9Y3N9 320 aa13.46□□□□□ -0.25
CCNC-213ENST00000523541 FCN1O00602 326 aa13.45□□□□□ -0.26
CCNC-213ENST00000523541 AIREO43918 545 aa13.45□□□□□ -0.26
CCNC-213ENST00000523541 HLA-DQB1P01920 261 aa13.45□□□□□ -0.26
CCNC-213ENST00000523541 TMEM177Q53S58 311 aa13.45□□□□□ -0.26
CCNC-213ENST00000523541 PPP1R27Q86WC6 154 aa13.45□□□□□ -0.26
CCNC-213ENST00000523541 ANXA10Q9UJ72 324 aa13.45□□□□□ -0.26
CCNC-213ENST00000523541 ELF5Q9UKW6 265 aaPredicted RBP13.45□□□□□ -0.26
CCNC-213ENST00000523541 IGKV1D-8A0A087WSZ0 117 aa13.44□□□□□ -0.26
CCNC-213ENST00000523541 TMEM235A6NFC5 223 aa13.44□□□□□ -0.26
CCNC-213ENST00000523541 I3L521 148 aa13.44□□□□□ -0.26
CCNC-213ENST00000523541 CLEC2LP0C7M8 214 aa13.44□□□□□ -0.26
CCNC-213ENST00000523541 EGR2P11161 476 aaPredicted RBP13.44□□□□□ -0.26
CCNC-213ENST00000523541 DUTP33316 252 aaKnown RBP13.44□□□□□ -0.26
CCNC-213ENST00000523541 LUMP51884 338 aaPredicted RBP13.44□□□□□ -0.26
CCNC-213ENST00000523541 FHL3Q13643 280 aa13.44□□□□□ -0.26
CCNC-213ENST00000523541 ZNF645Q8N7E2 425 aa13.44□□□□□ -0.26
CCNC-213ENST00000523541 YIPF6Q96EC8 236 aa13.44□□□□□ -0.26
CCNC-213ENST00000523541 KLK15Q9H2R5 256 aa13.44□□□□□ -0.26
CCNC-213ENST00000523541 SLA2Q9H6Q3 261 aa13.44□□□□□ -0.26
CCNC-213ENST00000523541 RNF167Q9H6Y7 350 aa13.44□□□□□ -0.26
CCNC-213ENST00000523541 A3GALT2U3KPV4 340 aa13.44□□□□□ -0.26
CCNC-213ENST00000523541 TRIM64CA6NLI5 447 aa13.43□□□□□ -0.26
CCNC-213ENST00000523541 ARPC1BO15143 372 aaKnown RBP13.43□□□□□ -0.26
CCNC-213ENST00000523541 CBX5P45973 191 aa13.43□□□□□ -0.26
CCNC-213ENST00000523541 LINC00205P59089 165 aa13.43□□□□□ -0.26
CCNC-213ENST00000523541 DCTN2Q13561 401 aaKnown RBP13.43□□□□□ -0.26
CCNC-213ENST00000523541 ECSCRQ19T08 205 aa13.43□□□□□ -0.26
CCNC-213ENST00000523541 ACTBL2Q562R1 376 aa13.43□□□□□ -0.26
CCNC-213ENST00000523541 TEX45Q8NA69 505 aa13.43□□□□□ -0.26
CCNC-213ENST00000523541 OSR1Q8TAX0 266 aaPredicted RBP13.43□□□□□ -0.26
CCNC-213ENST00000523541 NUDCD2Q8WVJ2 157 aa13.43□□□□□ -0.26
CCNC-213ENST00000523541 DDB2Q92466 427 aa13.43□□□□□ -0.26
CCNC-213ENST00000523541 S100A16Q96FQ6 103 aaKnown RBP13.43□□□□□ -0.26
CCNC-213ENST00000523541 TRAV18A0A075B6X5 111 aa13.42□□□□□ -0.26
CCNC-213ENST00000523541 A0A1W2PN81 502 aa13.42□□□□□ -0.26
CCNC-213ENST00000523541 H3BUA1 57 aa13.42□□□□□ -0.26
CCNC-213ENST00000523541 SHOXO15266 292 aa13.42□□□□□ -0.26
CCNC-213ENST00000523541 SLC25A17O43808 307 aa13.42□□□□□ -0.26
CCNC-213ENST00000523541 SSX5O60225 188 aa13.42□□□□□ -0.26
CCNC-213ENST00000523541 RAMP3O60896 148 aa13.42□□□□□ -0.26
CCNC-213ENST00000523541 BRI3O95415 125 aa13.42□□□□□ -0.26
CCNC-213ENST00000523541 CA2P00918 260 aa13.42□□□□□ -0.26
CCNC-213ENST00000523541 IGLV2-23P01705 113 aa13.42□□□□□ -0.26
CCNC-213ENST00000523541 CRYGBP07316 175 aa13.42□□□□□ -0.26
CCNC-213ENST00000523541 OR8U8P0C7N1 319 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms