RNA–Protein interactions for RNA: ENST00000523390.1

PCDHGB1-201, Transcript of protocadherin gamma subfamily B, 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGB1, Length 4,590 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1-201ENST00000523390 DAOP14920 347 aa11.1□□□□□ -0.63
PCDHGB1-201ENST00000523390 B2MP61769 119 aa11.1□□□□□ -0.63
PCDHGB1-201ENST00000523390 TMEM187Q14656 261 aa11.1□□□□□ -0.63
PCDHGB1-201ENST00000523390 ELOVL5Q9NYP7 299 aa11.1□□□□□ -0.63
PCDHGB1-201ENST00000523390 PQLC2LA1A4F0 135 aa11.1□□□□□ -0.63
PCDHGB1-201ENST00000523390 ZNF785A8K8V0 405 aa11.1□□□□□ -0.63
PCDHGB1-201ENST00000523390 PROB1E7EW31 1015 aa11.1□□□□□ -0.63
PCDHGB1-201ENST00000523390 S1PR2O95136 353 aa11.1□□□□□ -0.63
PCDHGB1-201ENST00000523390 ID4P47928 161 aa11.1□□□□□ -0.63
PCDHGB1-201ENST00000523390 UBE2L3P68036 154 aaKnown RBP11.1□□□□□ -0.63
PCDHGB1-201ENST00000523390 ZCCHC24Q8N2G6 241 aaKnown RBP11.1□□□□□ -0.63
PCDHGB1-201ENST00000523390 MARVELD3Q96A59 401 aa11.1□□□□□ -0.63
PCDHGB1-201ENST00000523390 B3GALT5-AS1P59052 145 aa11.1□□□□□ -0.63
PCDHGB1-201ENST00000523390 ARL16Q0P5N6 197 aa11.1□□□□□ -0.63
PCDHGB1-201ENST00000523390 FABP9Q0Z7S8 132 aa11.1□□□□□ -0.63
PCDHGB1-201ENST00000523390 TMEM241Q24JQ0 296 aa11.1□□□□□ -0.63
PCDHGB1-201ENST00000523390 FAM24BQ8N5W8 94 aa11.1□□□□□ -0.63
PCDHGB1-201ENST00000523390 FAM216BQ8N7L0 139 aa11.1□□□□□ -0.63
PCDHGB1-201ENST00000523390 MDS2Q8NDY4 140 aa11.1□□□□□ -0.63
PCDHGB1-201ENST00000523390 OR4P4Q8NGL7 312 aa11.1□□□□□ -0.63
PCDHGB1-201ENST00000523390 CTDSP1Q9GZU7 261 aa11.1□□□□□ -0.63
PCDHGB1-201ENST00000523390 IGHV1-69-2A0A0G2JMI3 117 aa11.09□□□□□ -0.63
PCDHGB1-201ENST00000523390 SLC25A5P05141 298 aaKnown RBP11.09□□□□□ -0.63
PCDHGB1-201ENST00000523390 ARF6P62330 175 aa11.09□□□□□ -0.63
PCDHGB1-201ENST00000523390 ZNF439Q8NDP4 499 aa11.09□□□□□ -0.63
PCDHGB1-201ENST00000523390 OR1B1Q8NGR6 318 aa11.09□□□□□ -0.63
PCDHGB1-201ENST00000523390 SIRT7Q9NRC8 400 aa11.09□□□□□ -0.63
PCDHGB1-201ENST00000523390 IDI2-AS1Q9NZ38 188 aa11.09□□□□□ -0.63
PCDHGB1-201ENST00000523390 UCP3P55916 312 aa11.09□□□□□ -0.63
PCDHGB1-201ENST00000523390 COA4Q9NYJ1 87 aa11.09□□□□□ -0.63
PCDHGB1-201ENST00000523390 ZNF596Q8TC21 504 aa11.09□□□□□ -0.63
PCDHGB1-201ENST00000523390 C1RLQ9NZP8 487 aa11.09□□□□□ -0.63
PCDHGB1-201ENST00000523390 TFF1P04155 84 aa11.09□□□□□ -0.63
PCDHGB1-201ENST00000523390 HKR1P10072 659 aa11.09□□□□□ -0.63
PCDHGB1-201ENST00000523390 ERVFRD-1P60508 538 aa11.09□□□□□ -0.63
PCDHGB1-201ENST00000523390 GUCA2BQ16661 112 aa11.09□□□□□ -0.63
PCDHGB1-201ENST00000523390 SLC35E4Q6ICL7 350 aa11.09□□□□□ -0.63
PCDHGB1-201ENST00000523390 VKORC1L1Q8N0U8 176 aa11.09□□□□□ -0.63
PCDHGB1-201ENST00000523390 SLC24A4Q8NFF2 622 aa11.09□□□□□ -0.63
PCDHGB1-201ENST00000523390 PIEZO1Q92508 2521 aa11.08□□□□□ -0.63
PCDHGB1-201ENST00000523390 NOTCH2Q04721 2471 aa11.08□□□□□ -0.63
PCDHGB1-201ENST00000523390 G3V3Q6 166 aa11.08□□□□□ -0.64
PCDHGB1-201ENST00000523390 PITX3O75364 302 aa11.08□□□□□ -0.64
PCDHGB1-201ENST00000523390 EIF3GO75821 320 aaKnown RBP eCLIP11.08□□□□□ -0.64
PCDHGB1-201ENST00000523390 RNF144BQ7Z419 303 aa11.08□□□□□ -0.64
PCDHGB1-201ENST00000523390 POC1AQ8NBT0 407 aa11.08□□□□□ -0.64
PCDHGB1-201ENST00000523390 NDFIP1Q9BT67 221 aa11.08□□□□□ -0.64
PCDHGB1-201ENST00000523390 MARCH11A6NNE9 402 aa11.08□□□□□ -0.64
PCDHGB1-201ENST00000523390 IQCF6A8MYZ5 107 aa11.08□□□□□ -0.64
PCDHGB1-201ENST00000523390 SPINK4O60575 86 aa11.08□□□□□ -0.64
PCDHGB1-201ENST00000523390 SNRPCP09234 159 aaKnown RBP11.08□□□□□ -0.64
PCDHGB1-201ENST00000523390 SNRPEP62304 92 aaKnown RBP11.08□□□□□ -0.64
PCDHGB1-201ENST00000523390 PSG5Q15238 335 aa11.08□□□□□ -0.64
PCDHGB1-201ENST00000523390 BATFQ16520 125 aa11.08□□□□□ -0.64
PCDHGB1-201ENST00000523390 SPNS3Q6ZMD2 512 aa11.08□□□□□ -0.64
PCDHGB1-201ENST00000523390 SLC16A13Q7RTY0 426 aa11.08□□□□□ -0.64
PCDHGB1-201ENST00000523390 OR13A1Q8NGR1 328 aa11.08□□□□□ -0.64
PCDHGB1-201ENST00000523390 RBKSQ9H477 322 aa11.08□□□□□ -0.64
PCDHGB1-201ENST00000523390 JPT1Q9UK76 154 aa11.08□□□□□ -0.64
PCDHGB1-201ENST00000523390 A0A0A6YYD4 124 aa11.08□□□□□ -0.64
PCDHGB1-201ENST00000523390 IGKV1-12A0A0C4DH73 117 aa11.08□□□□□ -0.64
PCDHGB1-201ENST00000523390 HSBP1L1C9JCN9 74 aa11.08□□□□□ -0.64
PCDHGB1-201ENST00000523390 GNG7O60262 68 aa11.08□□□□□ -0.64
PCDHGB1-201ENST00000523390 CLN5O75503 358 aa11.08□□□□□ -0.64
PCDHGB1-201ENST00000523390 IGKV1D-12P01611 117 aa11.08□□□□□ -0.64
PCDHGB1-201ENST00000523390 ARG1P05089 322 aa11.08□□□□□ -0.64
PCDHGB1-201ENST00000523390 WNT5AP41221 380 aa11.08□□□□□ -0.64
PCDHGB1-201ENST00000523390 OR4F17Q8NGA8 305 aa11.08□□□□□ -0.64
PCDHGB1-201ENST00000523390 POM121Q96HA1 1249 aa11.08□□□□□ -0.64
PCDHGB1-201ENST00000523390 FBLN5Q9UBX5 448 aa11.08□□□□□ -0.64
PCDHGB1-201ENST00000523390 ZNF98A6NK75 572 aa11.08□□□□□ -0.64
PCDHGB1-201ENST00000523390 GAPDHP04406 335 aaKnown RBP11.08□□□□□ -0.64
PCDHGB1-201ENST00000523390 AWAT1Q58HT5 328 aa11.08□□□□□ -0.64
PCDHGB1-201ENST00000523390 RNFT1Q5M7Z0 435 aa11.08□□□□□ -0.64
PCDHGB1-201ENST00000523390 RASL11BQ9BPW5 248 aa11.08□□□□□ -0.64
PCDHGB1-201ENST00000523390 TMEM140Q9NV12 185 aa11.08□□□□□ -0.64
PCDHGB1-201ENST00000523390 OTOGLQ3ZCN5 2332 aa11.07□□□□□ -0.64
PCDHGB1-201ENST00000523390 MPTX1A8MV57 137 aa11.07□□□□□ -0.64
PCDHGB1-201ENST00000523390 B9A039 149 aa11.07□□□□□ -0.64
PCDHGB1-201ENST00000523390 CLDN34H7C241 214 aa11.07□□□□□ -0.64
PCDHGB1-201ENST00000523390 CHEK1O14757 476 aa11.07□□□□□ -0.64
PCDHGB1-201ENST00000523390 NDUFA2O43678 99 aa11.07□□□□□ -0.64
PCDHGB1-201ENST00000523390 SLC25A17O43808 307 aa11.07□□□□□ -0.64
PCDHGB1-201ENST00000523390 PAGE4O60829 102 aa11.07□□□□□ -0.64
PCDHGB1-201ENST00000523390 FBP1P09467 338 aa11.07□□□□□ -0.64
PCDHGB1-201ENST00000523390 TEPPQ6URK8 271 aa11.07□□□□□ -0.64
PCDHGB1-201ENST00000523390 ISOC2Q96AB3 205 aa11.07□□□□□ -0.64
PCDHGB1-201ENST00000523390 IFT22Q9H7X7 185 aa11.07□□□□□ -0.64
PCDHGB1-201ENST00000523390 PARP11Q9NR21 331 aa11.07□□□□□ -0.64
PCDHGB1-201ENST00000523390 MMP7P09237 267 aaPredicted RBP11.07□□□□□ -0.64
PCDHGB1-201ENST00000523390 CD1BP29016 333 aa11.07□□□□□ -0.64
PCDHGB1-201ENST00000523390 KIR2DL2P43627 348 aaPredicted RBP11.07□□□□□ -0.64
PCDHGB1-201ENST00000523390 RPL27AP46776 148 aaKnown RBP11.07□□□□□ -0.64
PCDHGB1-201ENST00000523390 MYPOPQ86VE0 399 aaPredicted RBP11.07□□□□□ -0.64
PCDHGB1-201ENST00000523390 DOLPP1Q86YN1 238 aa11.07□□□□□ -0.64
PCDHGB1-201ENST00000523390 OR1L4Q8NGR5 311 aa11.07□□□□□ -0.64
PCDHGB1-201ENST00000523390 AAMDCQ9H7C9 122 aa11.07□□□□□ -0.64
PCDHGB1-201ENST00000523390 TRAV20A0A0B4J274 112 aa11.07□□□□□ -0.64
PCDHGB1-201ENST00000523390 PPIAL4CA0A0B4J2A2 164 aa11.07□□□□□ -0.64
PCDHGB1-201ENST00000523390 C11orf94C9JXX5 98 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms