RNA–Protein interactions for RNA: ENST00000522387.5

PABPC1-219, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2 BASIC

Gene PABPC1, Length 2,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-219ENST00000522387 LIPFP07098 398 aa10.15□□□□□ -0.79
PABPC1-219ENST00000522387 MSMBP08118 114 aa10.15□□□□□ -0.79
PABPC1-219ENST00000522387 GZMHP20718 246 aa10.15□□□□□ -0.79
PABPC1-219ENST00000522387 DTYMKP23919 212 aa10.15□□□□□ -0.79
PABPC1-219ENST00000522387 COX7A1P24310 79 aa10.15□□□□□ -0.79
PABPC1-219ENST00000522387 CEACAM6P40199 344 aa10.15□□□□□ -0.79
PABPC1-219ENST00000522387 HLA-DRB3P79483 266 aa10.15□□□□□ -0.79
PABPC1-219ENST00000522387 CYCSP99999 105 aaKnown RBP10.15□□□□□ -0.79
PABPC1-219ENST00000522387 KLRD1Q13241 179 aa10.15□□□□□ -0.79
PABPC1-219ENST00000522387 CBLN2Q8IUK8 224 aa10.15□□□□□ -0.79
PABPC1-219ENST00000522387 GAPTQ8N292 157 aa10.15□□□□□ -0.79
PABPC1-219ENST00000522387 RNF141Q8WVD5 230 aa10.15□□□□□ -0.79
PABPC1-219ENST00000522387 TMED6Q8WW62 240 aa10.15□□□□□ -0.79
PABPC1-219ENST00000522387 RIMS4Q9H426 269 aaPredicted RBP10.15□□□□□ -0.79
PABPC1-219ENST00000522387 GNG12Q9UBI6 72 aa10.15□□□□□ -0.79
PABPC1-219ENST00000522387 SPINT2O43291 252 aa10.14□□□□□ -0.79
PABPC1-219ENST00000522387 FXYD4P59646 89 aa10.14□□□□□ -0.79
PABPC1-219ENST00000522387 TMEM128Q5BJH2 165 aa10.14□□□□□ -0.79
PABPC1-219ENST00000522387 ZNF880Q6PDB4 577 aa10.14□□□□□ -0.79
PABPC1-219ENST00000522387 C11orf42Q8N5U0 333 aa10.14□□□□□ -0.79
PABPC1-219ENST00000522387 TMEM230Q96A57 120 aa10.14□□□□□ -0.79
PABPC1-219ENST00000522387 TREM1Q9NP99 234 aa10.14□□□□□ -0.79
PABPC1-219ENST00000522387 NUDT19A8MXV4 375 aa10.13□□□□□ -0.79
PABPC1-219ENST00000522387 B4DSR2 109 aa10.13□□□□□ -0.79
PABPC1-219ENST00000522387 OR5H8P0DN80 308 aa10.13□□□□□ -0.79
PABPC1-219ENST00000522387 PVALBP20472 110 aaPredicted RBP10.13□□□□□ -0.79
PABPC1-219ENST00000522387 MEF2CQ06413 473 aaPredicted RBP10.13□□□□□ -0.79
PABPC1-219ENST00000522387 LOXL1Q08397 574 aaPredicted RBP10.13□□□□□ -0.79
PABPC1-219ENST00000522387 C10orf91Q5T1B1 145 aa10.13□□□□□ -0.79
PABPC1-219ENST00000522387 Q71RC1 249 aaPredicted RBP10.13□□□□□ -0.79
PABPC1-219ENST00000522387 SPAG16Q8N0X2 631 aa10.13□□□□□ -0.79
PABPC1-219ENST00000522387 OR10J5Q8NHC4 309 aa10.13□□□□□ -0.79
PABPC1-219ENST00000522387 ZNF2Q9BSG1 426 aaPredicted RBP10.13□□□□□ -0.79
PABPC1-219ENST00000522387 RTBDNQ9BSG5 229 aaPredicted RBP10.13□□□□□ -0.79
PABPC1-219ENST00000522387 TMEM231Q9H6L2 316 aa10.13□□□□□ -0.79
PABPC1-219ENST00000522387 RNF150Q9ULK6 438 aa10.13□□□□□ -0.79
PABPC1-219ENST00000522387 ANAPC10Q9UM13 185 aa10.13□□□□□ -0.79
PABPC1-219ENST00000522387 GPR132Q9UNW8 380 aa10.13□□□□□ -0.79
PABPC1-219ENST00000522387 CARHSP1Q9Y2V2 147 aaKnown RBP10.13□□□□□ -0.79
PABPC1-219ENST00000522387 TRBV23-1A0A0A0MS06 115 aa10.13□□□□□ -0.79
PABPC1-219ENST00000522387 IGHV2-70DA0A0C4DH43 119 aa10.13□□□□□ -0.79
PABPC1-219ENST00000522387 KIR2DS1A0A191URI9 304 aa10.13□□□□□ -0.79
PABPC1-219ENST00000522387 MSGN1A6NI15 193 aa10.13□□□□□ -0.79
PABPC1-219ENST00000522387 GPR37O15354 613 aa10.13□□□□□ -0.79
PABPC1-219ENST00000522387 ADAP1O75689 374 aa10.13□□□□□ -0.79
PABPC1-219ENST00000522387 SFT2D2O95562 160 aa10.13□□□□□ -0.79
PABPC1-219ENST00000522387 IGHV4-31P0DP07 118 aa10.13□□□□□ -0.79
PABPC1-219ENST00000522387 ZNF16P17020 682 aaPredicted RBP10.13□□□□□ -0.79
PABPC1-219ENST00000522387 FCGR2CP31995 323 aa10.13□□□□□ -0.79
PABPC1-219ENST00000522387 KIR2DS4P43632 304 aa10.13□□□□□ -0.79
PABPC1-219ENST00000522387 CBX5P45973 191 aa10.13□□□□□ -0.79
PABPC1-219ENST00000522387 PAX2Q02962 417 aa10.13□□□□□ -0.79
PABPC1-219ENST00000522387 KIR2DS1Q14954 304 aa10.13□□□□□ -0.79
PABPC1-219ENST00000522387 HMGN3Q15651 99 aa10.13□□□□□ -0.79
PABPC1-219ENST00000522387 DHRS7BQ6IAN0 325 aaPredicted RBP10.13□□□□□ -0.79
PABPC1-219ENST00000522387 BTNL3Q6UXE8 466 aa10.13□□□□□ -0.79
PABPC1-219ENST00000522387 PNKDQ8N490 385 aa10.13□□□□□ -0.79
PABPC1-219ENST00000522387 Q8N7P7 452 aa10.13□□□□□ -0.79
PABPC1-219ENST00000522387 OR4A4PQ8NGN8 299 aa10.13□□□□□ -0.79
PABPC1-219ENST00000522387 GPHA2Q96T91 129 aa10.13□□□□□ -0.79
PABPC1-219ENST00000522387 SUCNR1Q9BXA5 334 aa10.13□□□□□ -0.79
PABPC1-219ENST00000522387 GAL3ST2Q9H3Q3 398 aa10.13□□□□□ -0.79
PABPC1-219ENST00000522387 UBE2J1Q9Y385 318 aaPredicted RBP10.13□□□□□ -0.79
PABPC1-219ENST00000522387 ENSAO43768 121 aaKnown RBP10.12□□□□□ -0.79
PABPC1-219ENST00000522387 FAM157CP0CG43 387 aa10.12□□□□□ -0.79
PABPC1-219ENST00000522387 RPL35P42766 123 aaKnown RBP10.12□□□□□ -0.79
PABPC1-219ENST00000522387 AKR1D1P51857 326 aa10.12□□□□□ -0.79
PABPC1-219ENST00000522387 ZNF134P52741 427 aa10.12□□□□□ -0.79
PABPC1-219ENST00000522387 SUPT4H1P63272 117 aaKnown RBP10.12□□□□□ -0.79
PABPC1-219ENST00000522387 ACTBL2Q562R1 376 aa10.12□□□□□ -0.79
PABPC1-219ENST00000522387 VAX1Q5SQQ9 334 aa10.12□□□□□ -0.79
PABPC1-219ENST00000522387 PRSS54Q6PEW0 395 aa10.12□□□□□ -0.79
PABPC1-219ENST00000522387 VMO1Q7Z5L0 202 aa10.12□□□□□ -0.79
PABPC1-219ENST00000522387 TOMM40LQ969M1 308 aa10.12□□□□□ -0.79
PABPC1-219ENST00000522387 C7orf69Q9H7B7 122 aa10.12□□□□□ -0.79
PABPC1-219ENST00000522387 RAB18Q9NP72 206 aa10.12□□□□□ -0.79
PABPC1-219ENST00000522387 OR5AC2Q9NZP5 309 aa10.12□□□□□ -0.79
PABPC1-219ENST00000522387 RBM7Q9Y580 266 aaKnown RBP10.12□□□□□ -0.79
PABPC1-219ENST00000522387 F8P00451 2351 aa10.12□□□□□ -0.79
PABPC1-219ENST00000522387 TRBV6-6A0A0A6YYG2 114 aa10.12□□□□□ -0.79
PABPC1-219ENST00000522387 ZNF705EA8MWA4 302 aaPredicted RBP10.12□□□□□ -0.79
PABPC1-219ENST00000522387 SLC31A2O15432 143 aa10.12□□□□□ -0.79
PABPC1-219ENST00000522387 TOX4O94842 621 aa10.12□□□□□ -0.79
PABPC1-219ENST00000522387 SNAPINO95295 136 aa10.12□□□□□ -0.79
PABPC1-219ENST00000522387 AVPP01185 164 aa10.12□□□□□ -0.79
PABPC1-219ENST00000522387 CGB3P0DN86 165 aa10.12□□□□□ -0.79
PABPC1-219ENST00000522387 CGB7P0DN87 165 aa10.12□□□□□ -0.79
PABPC1-219ENST00000522387 IGHV1-8P0DP01 117 aa10.12□□□□□ -0.79
PABPC1-219ENST00000522387 LOXL3P58215 753 aa10.12□□□□□ -0.79
PABPC1-219ENST00000522387 PAX5Q02548 391 aa10.12□□□□□ -0.79
PABPC1-219ENST00000522387 PJVKQ0ZLH3 352 aa10.12□□□□□ -0.79
PABPC1-219ENST00000522387 ARRDC1Q8N5I2 433 aa10.12□□□□□ -0.79
PABPC1-219ENST00000522387 LINC01356Q8N9X3 169 aa10.12□□□□□ -0.79
PABPC1-219ENST00000522387 LY6G5BQ8NDX9 201 aa10.12□□□□□ -0.79
PABPC1-219ENST00000522387 TMEM186Q96B77 213 aa10.12□□□□□ -0.79
PABPC1-219ENST00000522387 NECAP2Q9NVZ3 263 aa10.12□□□□□ -0.79
PABPC1-219ENST00000522387 NF1P21359 2839 aa10.11□□□□□ -0.79
PABPC1-219ENST00000522387 ZNF729A6NN14 1252 aaPredicted RBP10.11□□□□□ -0.79
PABPC1-219ENST00000522387 ST8SIA5O15466 376 aa10.11□□□□□ -0.79
PABPC1-219ENST00000522387 FPR2P25090 351 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms