RNA–Protein interactions for RNA: ENST00000520898.5

UBR5-208, Transcript of ubiquitin protein ligase E3 component n-recognin 5, human

TSL 3

Gene UBR5, Length 582 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBR5-208	ENST00000520898	KCNJ3	P48549	501 aa		3.89	□□□□□ -1.79
UBR5-208	ENST00000520898	CRIP2	P52943	208 aa	Predicted RBP	3.89	□□□□□ -1.79
UBR5-208	ENST00000520898	CRISP1	P54107	249 aa		3.89	□□□□□ -1.79
UBR5-208	ENST00000520898	CX3CL1	P78423	397 aa		3.89	□□□□□ -1.79
UBR5-208	ENST00000520898	MS4A2	Q01362	244 aa		3.89	□□□□□ -1.79
UBR5-208	ENST00000520898	LBH	Q53QV2	105 aa	Predicted RBP	3.89	□□□□□ -1.79
UBR5-208	ENST00000520898	PAN3	Q58A45	887 aa	Known RBP	3.89	□□□□□ -1.79
UBR5-208	ENST00000520898	RNLS	Q5VYX0	342 aa		3.89	□□□□□ -1.79
UBR5-208	ENST00000520898	SLC25A48	Q6ZT89	311 aa	Known RBP	3.89	□□□□□ -1.79
UBR5-208	ENST00000520898	DEFB107A	Q8IZN7	70 aa		3.89	□□□□□ -1.79
UBR5-208	ENST00000520898	UXS1	Q8NBZ7	420 aa		3.89	□□□□□ -1.79
UBR5-208	ENST00000520898	OR5D18	Q8NGL1	313 aa		3.89	□□□□□ -1.79
UBR5-208	ENST00000520898	TMEM106A	Q96A25	262 aa		3.89	□□□□□ -1.79
UBR5-208	ENST00000520898	FGGY	Q96C11	551 aa		3.89	□□□□□ -1.79
UBR5-208	ENST00000520898	BSCL2	Q96G97	398 aa	Predicted RBP	3.89	□□□□□ -1.79
UBR5-208	ENST00000520898	SGK494	Q96LW2	274 aa		3.89	□□□□□ -1.79
UBR5-208	ENST00000520898	SPACA5	Q96QH8	159 aa		3.89	□□□□□ -1.79
UBR5-208	ENST00000520898	ZNF556	Q9HAH1	456 aa		3.89	□□□□□ -1.79
UBR5-208	ENST00000520898	DNAJC4	Q9NNZ3	241 aa		3.89	□□□□□ -1.79
UBR5-208	ENST00000520898	PARP11	Q9NR21	331 aa		3.89	□□□□□ -1.79
UBR5-208	ENST00000520898	STUB1	Q9UNE7	303 aa		3.89	□□□□□ -1.79
UBR5-208	ENST00000520898	FBXO7	Q9Y3I1	522 aa		3.89	□□□□□ -1.79
UBR5-208	ENST00000520898	MUC4	Q99102	2169 aa		3.89	□□□□□ -1.79
UBR5-208	ENST00000520898		A0A1W2PPK0	400 aa		3.88	□□□□□ -1.79
UBR5-208	ENST00000520898		E9PI62	339 aa		3.88	□□□□□ -1.79
UBR5-208	ENST00000520898		M0R129	80 aa		3.88	□□□□□ -1.79
UBR5-208	ENST00000520898	SDCBP	O00560	298 aa	Predicted RBP	3.88	□□□□□ -1.79
UBR5-208	ENST00000520898	SLC31A2	O15432	143 aa		3.88	□□□□□ -1.79
UBR5-208	ENST00000520898	ST8SIA3	O43173	380 aa		3.88	□□□□□ -1.79
UBR5-208	ENST00000520898	LANCL1	O43813	399 aa		3.88	□□□□□ -1.79
UBR5-208	ENST00000520898	ORC5	O43913	435 aa		3.88	□□□□□ -1.79
UBR5-208	ENST00000520898	DBT	P11182	482 aa	Known RBP	3.88	□□□□□ -1.79
UBR5-208	ENST00000520898	ANXA8	P13928	327 aa		3.88	□□□□□ -1.79
UBR5-208	ENST00000520898	IL3RA	P26951	378 aa		3.88	□□□□□ -1.79
UBR5-208	ENST00000520898	ATP6V1E1	P36543	226 aa		3.88	□□□□□ -1.79
UBR5-208	ENST00000520898	ACTB	P60709	375 aa		3.88	□□□□□ -1.79
UBR5-208	ENST00000520898	NDP	Q00604	133 aa		3.88	□□□□□ -1.79
UBR5-208	ENST00000520898	ZNF85	Q03923	595 aa		3.88	□□□□□ -1.79
UBR5-208	ENST00000520898	RAB40B	Q12829	278 aa		3.88	□□□□□ -1.79
UBR5-208	ENST00000520898	KLF5	Q13887	457 aa	Predicted RBP	3.88	□□□□□ -1.79
UBR5-208	ENST00000520898	PTGES3	Q15185	160 aa	Known RBP	3.88	□□□□□ -1.79
UBR5-208	ENST00000520898	MMD	Q15546	238 aa		3.88	□□□□□ -1.79
UBR5-208	ENST00000520898	KISS1	Q15726	138 aa		3.88	□□□□□ -1.79
UBR5-208	ENST00000520898	C5orf64	Q2M2E5	130 aa		3.88	□□□□□ -1.79
UBR5-208	ENST00000520898	C2orf76	Q3KRA6	126 aa		3.88	□□□□□ -1.79
UBR5-208	ENST00000520898	CT45A1	Q5HYN5	189 aa		3.88	□□□□□ -1.79
UBR5-208	ENST00000520898	TMEM244	Q5VVB8	128 aa		3.88	□□□□□ -1.79
UBR5-208	ENST00000520898	CD200R1L	Q6Q8B3	271 aa		3.88	□□□□□ -1.79
UBR5-208	ENST00000520898	ASCL4	Q6XD76	172 aa		3.88	□□□□□ -1.79
UBR5-208	ENST00000520898	NRARP	Q7Z6K4	114 aa		3.88	□□□□□ -1.79
UBR5-208	ENST00000520898	DHFR2	Q86XF0	187 aa		3.88	□□□□□ -1.79
UBR5-208	ENST00000520898	RPP25L	Q8N5L8	163 aa	Known RBP	3.88	□□□□□ -1.79
UBR5-208	ENST00000520898	THAP8	Q8NA92	274 aa		3.88	□□□□□ -1.79
UBR5-208	ENST00000520898	SUMF2	Q8NBJ7	301 aa		3.88	□□□□□ -1.79
UBR5-208	ENST00000520898	PXT1	Q8NFP0	134 aa		3.88	□□□□□ -1.79
UBR5-208	ENST00000520898	NPB	Q8NG41	125 aa		3.88	□□□□□ -1.79
UBR5-208	ENST00000520898	OR51A4	Q8NGJ6	313 aa		3.88	□□□□□ -1.79
UBR5-208	ENST00000520898	OR13C9	Q8NGT0	318 aa		3.88	□□□□□ -1.79
UBR5-208	ENST00000520898	OR2G2	Q8NGZ5	317 aa		3.88	□□□□□ -1.79
UBR5-208	ENST00000520898	OR10AC1	Q8NH08	325 aa		3.88	□□□□□ -1.79
UBR5-208	ENST00000520898	CT45A3	Q8NHU0	189 aa		3.88	□□□□□ -1.79
UBR5-208	ENST00000520898	CASTOR1	Q8WTX7	329 aa		3.88	□□□□□ -1.79
UBR5-208	ENST00000520898	GATAD1	Q8WUU5	269 aa		3.88	□□□□□ -1.79
UBR5-208	ENST00000520898	ARL11	Q969Q4	196 aa		3.88	□□□□□ -1.79
UBR5-208	ENST00000520898	FLYWCH2	Q96CP2	140 aa	Known RBP	3.88	□□□□□ -1.79
UBR5-208	ENST00000520898	TBX5	Q99593	518 aa		3.88	□□□□□ -1.79
UBR5-208	ENST00000520898	ANKRD60	Q9BZ19	345 aa		3.88	□□□□□ -1.79
UBR5-208	ENST00000520898	CST11	Q9H112	138 aa		3.88	□□□□□ -1.79
UBR5-208	ENST00000520898	NDE1	Q9NXR1	346 aa		3.88	□□□□□ -1.79
UBR5-208	ENST00000520898	ZNF581	Q9P0T4	197 aa		3.88	□□□□□ -1.79
UBR5-208	ENST00000520898	FOXA2	Q9Y261	457 aa	Predicted RBP	3.88	□□□□□ -1.79
UBR5-208	ENST00000520898	NUBP2	Q9Y5Y2	271 aa		3.88	□□□□□ -1.79
UBR5-208	ENST00000520898	HERC1	Q15751	4861 aa		3.88	□□□□□ -1.79
UBR5-208	ENST00000520898	DNAH11	Q96DT5	4516 aa		3.88	□□□□□ -1.79
UBR5-208	ENST00000520898	IGHV3-43	A0A0B4J1X8	118 aa		3.87	□□□□□ -1.79
UBR5-208	ENST00000520898		A0A1W2PN81	502 aa		3.87	□□□□□ -1.79
UBR5-208	ENST00000520898	TMEM30CP	A0ZSE6	113 aa		3.87	□□□□□ -1.79
UBR5-208	ENST00000520898	IZUMO1R	A6ND01	250 aa		3.87	□□□□□ -1.79
UBR5-208	ENST00000520898		H0Y980	276 aa		3.87	□□□□□ -1.79
UBR5-208	ENST00000520898	NBR2	O15453	112 aa		3.87	□□□□□ -1.79
UBR5-208	ENST00000520898	NDUFA3	O95167	84 aa		3.87	□□□□□ -1.79
UBR5-208	ENST00000520898	BRI3	O95415	125 aa		3.87	□□□□□ -1.79
UBR5-208	ENST00000520898	IGHV3-11	P01762	117 aa		3.87	□□□□□ -1.79
UBR5-208	ENST00000520898	IGHV3-43D	P0DP04	118 aa		3.87	□□□□□ -1.79
UBR5-208	ENST00000520898	EPHA2	P29317	976 aa		3.87	□□□□□ -1.79
UBR5-208	ENST00000520898	CHRNA7	P36544	502 aa		3.87	□□□□□ -1.79
UBR5-208	ENST00000520898	RPL24	P83731	157 aa	Known RBP	3.87	□□□□□ -1.79
UBR5-208	ENST00000520898	ECSCR	Q19T08	205 aa		3.87	□□□□□ -1.79
UBR5-208	ENST00000520898	PIGY	Q3MUY2	71 aa		3.87	□□□□□ -1.79
UBR5-208	ENST00000520898	TP53I3	Q53FA7	332 aa		3.87	□□□□□ -1.79
UBR5-208	ENST00000520898	NHLRC3	Q5JS37	347 aa		3.87	□□□□□ -1.79
UBR5-208	ENST00000520898	LCE5A	Q5TCM9	118 aa		3.87	□□□□□ -1.79
UBR5-208	ENST00000520898	C12orf73	Q69YU5	71 aa		3.87	□□□□□ -1.79
UBR5-208	ENST00000520898	ZNF660	Q6AZW8	331 aa	Predicted RBP	3.87	□□□□□ -1.79
UBR5-208	ENST00000520898	PYHIN1	Q6K0P9	492 aa		3.87	□□□□□ -1.79
UBR5-208	ENST00000520898	FAHD1	Q6P587	224 aa		3.87	□□□□□ -1.79
UBR5-208	ENST00000520898	ZNF497	Q6ZNH5	498 aa		3.87	□□□□□ -1.79
UBR5-208	ENST00000520898	C9orf47	Q6ZRZ4	202 aa		3.87	□□□□□ -1.79
UBR5-208	ENST00000520898	GTSCR1	Q86UQ5	136 aa		3.87	□□□□□ -1.79
UBR5-208	ENST00000520898	TCTEX1D1	Q8N7M0	179 aa		3.87	□□□□□ -1.79

Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms