RNA–Protein interactions for RNA: ENST00000520493.1

SQLE-204, Transcript of squalene epoxidase, humanhuman

TSL 3

Gene SQLE, Length 737 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-204ENST00000520493 CDK9P50750 372 aaKnown RBP2.32□□□□□ -2.04
SQLE-204ENST00000520493 BTN3A2P78410 334 aa2.32□□□□□ -2.04
SQLE-204ENST00000520493 HOXC5Q00444 222 aa2.32□□□□□ -2.04
SQLE-204ENST00000520493 PRDX4Q13162 271 aa2.32□□□□□ -2.04
SQLE-204ENST00000520493 PMAIP1Q13794 54 aa2.32□□□□□ -2.04
SQLE-204ENST00000520493 FAM201AQ5SY85 155 aa2.32□□□□□ -2.04
SQLE-204ENST00000520493 C10orf91Q5T1B1 145 aa2.32□□□□□ -2.04
SQLE-204ENST00000520493 FAM173BQ6P4H8 233 aa2.32□□□□□ -2.04
SQLE-204ENST00000520493 ALKAL1Q6UXT8 129 aa2.32□□□□□ -2.04
SQLE-204ENST00000520493 HIST2H3AQ71DI3 136 aa2.32□□□□□ -2.04
SQLE-204ENST00000520493 LYZL2Q7Z4W2 148 aa2.32□□□□□ -2.04
SQLE-204ENST00000520493 STX12Q86Y82 276 aa2.32□□□□□ -2.04
SQLE-204ENST00000520493 OR11G2Q8NGC1 345 aa2.32□□□□□ -2.04
SQLE-204ENST00000520493 OR2D3Q8NGH3 330 aa2.32□□□□□ -2.04
SQLE-204ENST00000520493 OR52B2Q96RD2 323 aa2.32□□□□□ -2.04
SQLE-204ENST00000520493 TBX5Q99593 518 aa2.32□□□□□ -2.04
SQLE-204ENST00000520493 TMEM109Q9BVC6 243 aa2.32□□□□□ -2.04
SQLE-204ENST00000520493 C1QTNF6Q9BXI9 259 aa2.32□□□□□ -2.04
SQLE-204ENST00000520493 DHCR7Q9UBM7 475 aaKnown RBP2.32□□□□□ -2.04
SQLE-204ENST00000520493 ZNF230Q9UIE0 474 aaPredicted RBP2.32□□□□□ -2.04
SQLE-204ENST00000520493 LINC00588Q9Y4M8 146 aa2.32□□□□□ -2.04
SQLE-204ENST00000520493 MMACHCQ9Y4U1 282 aa2.32□□□□□ -2.04
SQLE-204ENST00000520493 ICOSQ9Y6W8 199 aa2.32□□□□□ -2.04
SQLE-204ENST00000520493 ZBED9Q6R2W3 1325 aa2.32□□□□□ -2.04
SQLE-204ENST00000520493 EIF3AQ14152 1382 aaKnown RBP2.32□□□□□ -2.04
SQLE-204ENST00000520493 COLCA2A8K830 154 aa2.31□□□□□ -2.04
SQLE-204ENST00000520493 EEF1E1-BLOC1S5C9J1V9 151 aa2.31□□□□□ -2.04
SQLE-204ENST00000520493 E5RI56 91 aa2.31□□□□□ -2.04
SQLE-204ENST00000520493 H3BMM0 161 aa2.31□□□□□ -2.04
SQLE-204ENST00000520493 H3BQ85 93 aa2.31□□□□□ -2.04
SQLE-204ENST00000520493 RPL36A-HNRNPH2H7BZ11 118 aa2.31□□□□□ -2.04
SQLE-204ENST00000520493 EEF1E1O43324 174 aaKnown RBP2.31□□□□□ -2.04
SQLE-204ENST00000520493 GSTZ1O43708 216 aaPredicted RBP2.31□□□□□ -2.04
SQLE-204ENST00000520493 SH2D1AO60880 128 aa2.31□□□□□ -2.04
SQLE-204ENST00000520493 ZNF189O75820 626 aaPredicted RBP2.31□□□□□ -2.04
SQLE-204ENST00000520493 FAM228BP0C875 321 aa2.31□□□□□ -2.04
SQLE-204ENST00000520493 CCL1P22362 96 aa2.31□□□□□ -2.04
SQLE-204ENST00000520493 ATP6V0CP27449 155 aa2.31□□□□□ -2.04
SQLE-204ENST00000520493 GDI2P50395 445 aaKnown RBP2.31□□□□□ -2.04
SQLE-204ENST00000520493 DAPP51397 102 aa2.31□□□□□ -2.04
SQLE-204ENST00000520493 TMEM33P57088 247 aa2.31□□□□□ -2.04
SQLE-204ENST00000520493 PSME3P61289 254 aa2.31□□□□□ -2.04
SQLE-204ENST00000520493 HIST1H3AP68431 136 aa2.31□□□□□ -2.04
SQLE-204ENST00000520493 H3F3AP84243 136 aa2.31□□□□□ -2.04
SQLE-204ENST00000520493 BSPH1Q075Z2 132 aa2.31□□□□□ -2.04
SQLE-204ENST00000520493 APOFQ13790 326 aa2.31□□□□□ -2.04
SQLE-204ENST00000520493 LDLRAD2Q5SZI1 272 aa2.31□□□□□ -2.04
SQLE-204ENST00000520493 KPRPQ5T749 579 aaPredicted RBP2.31□□□□□ -2.04
SQLE-204ENST00000520493 SPINT4Q6UDR6 99 aa2.31□□□□□ -2.04
SQLE-204ENST00000520493 HMGN2P46Q86SG4 172 aa2.31□□□□□ -2.04
SQLE-204ENST00000520493 CALHM3Q86XJ0 350 aa2.31□□□□□ -2.04
SQLE-204ENST00000520493 CD200R1Q8TD46 325 aa2.31□□□□□ -2.04
SQLE-204ENST00000520493 UBE2WQ96B02 151 aa2.31□□□□□ -2.04
SQLE-204ENST00000520493 DGCR14Q96DF8 476 aaKnown RBP2.31□□□□□ -2.04
SQLE-204ENST00000520493 DCUN1D1Q96GG9 259 aa2.31□□□□□ -2.04
SQLE-204ENST00000520493 SEC22CQ9BRL7 303 aa2.31□□□□□ -2.04
SQLE-204ENST00000520493 SCRT1Q9BWW7 348 aa2.31□□□□□ -2.04
SQLE-204ENST00000520493 TAS2R1Q9NYW7 299 aa2.31□□□□□ -2.04
SQLE-204ENST00000520493 DCCP43146 1447 aa2.31□□□□□ -2.04
SQLE-204ENST00000520493 ARHGEF11O15085 1522 aa2.31□□□□□ -2.04
SQLE-204ENST00000520493 CAMSAP1Q5T5Y3 1602 aa2.31□□□□□ -2.04
SQLE-204ENST00000520493 DICER1Q9UPY3 1922 aaKnown RBP2.3□□□□□ -2.04
SQLE-204ENST00000520493 OR4C45A6NMZ5 311 aa2.3□□□□□ -2.04
SQLE-204ENST00000520493 PSMD12O00232 456 aaPredicted RBP2.3□□□□□ -2.04
SQLE-204ENST00000520493 NOS1APO75052 506 aaPredicted RBP2.3□□□□□ -2.04
SQLE-204ENST00000520493 OR2B3O76000 313 aa2.3□□□□□ -2.04
SQLE-204ENST00000520493 IGHV3-53P01767 116 aa2.3□□□□□ -2.04
SQLE-204ENST00000520493 MAGEA12P43365 314 aa2.3□□□□□ -2.04
SQLE-204ENST00000520493 MAP2K4P45985 399 aa2.3□□□□□ -2.04
SQLE-204ENST00000520493 SERPINB9P50453 376 aa2.3□□□□□ -2.04
SQLE-204ENST00000520493 GZMMP51124 257 aa2.3□□□□□ -2.04
SQLE-204ENST00000520493 B2MP61769 119 aa2.3□□□□□ -2.04
SQLE-204ENST00000520493 BIKQ13323 160 aa2.3□□□□□ -2.04
SQLE-204ENST00000520493 MOBPQ13875 183 aa2.3□□□□□ -2.04
SQLE-204ENST00000520493 OR8G1Q15617 311 aa2.3□□□□□ -2.04
SQLE-204ENST00000520493 PYCR3Q53H96 274 aa2.3□□□□□ -2.04
SQLE-204ENST00000520493 TMEM42Q69YG0 159 aa2.3□□□□□ -2.04
SQLE-204ENST00000520493 OR6V1Q8N148 313 aa2.3□□□□□ -2.04
SQLE-204ENST00000520493 ZFAND2AQ8N6M9 145 aa2.3□□□□□ -2.04
SQLE-204ENST00000520493 ZNF615Q8N8J6 731 aa2.3□□□□□ -2.04
SQLE-204ENST00000520493 ZNF709Q8N972 641 aa2.3□□□□□ -2.04
SQLE-204ENST00000520493 PXT1Q8NFP0 134 aa2.3□□□□□ -2.04
SQLE-204ENST00000520493 OR51D1Q8NGF3 324 aa2.3□□□□□ -2.04
SQLE-204ENST00000520493 HIST1H2BAQ96A08 127 aa2.3□□□□□ -2.04
SQLE-204ENST00000520493 SLC25A44Q96H78 314 aaPredicted RBP2.3□□□□□ -2.04
SQLE-204ENST00000520493 NKX6-2Q9C056 277 aaPredicted RBP2.3□□□□□ -2.04
SQLE-204ENST00000520493 VCX3BQ9H321 246 aa2.3□□□□□ -2.04
SQLE-204ENST00000520493 ATPIF1Q9UII2 106 aa2.3□□□□□ -2.04
SQLE-204ENST00000520493 HHLA2Q9UM44 414 aa2.3□□□□□ -2.04
SQLE-204ENST00000520493 OR51B4Q9Y5P0 310 aa2.3□□□□□ -2.04
SQLE-204ENST00000520493 PXMP4Q9Y6I8 212 aa2.3□□□□□ -2.04
SQLE-204ENST00000520493 PCF11O94913 1555 aaKnown RBP2.3□□□□□ -2.04
SQLE-204ENST00000520493 OTOFQ9HC10 1997 aa2.3□□□□□ -2.04
SQLE-204ENST00000520493 DSCAML1Q8TD84 2053 aa2.3□□□□□ -2.04
SQLE-204ENST00000520493 TEP1Q99973 2627 aaKnown RBP2.3□□□□□ -2.04
SQLE-204ENST00000520493 CHD5Q8TDI0 1954 aa2.29□□□□□ -2.04
SQLE-204ENST00000520493 GRIN2BQ13224 1484 aa2.29□□□□□ -2.04
SQLE-204ENST00000520493 YEATS2Q9ULM3 1422 aa2.29□□□□□ -2.04
SQLE-204ENST00000520493 A0A087WUJ7 227 aa2.29□□□□□ -2.04
SQLE-204ENST00000520493 TMED7-TICAM2A0A0A6YYA0 188 aa2.29□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms