RNA–Protein interactions for RNA: ENST00000520265.1

VEGFA-221, Transcript of vascular endothelial growth factor A, humanhuman

TSL 5

Gene VEGFA, Length 336 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-221ENST00000520265 THBS3P49746 956 aa11.13□□□□□ -0.63
VEGFA-221ENST00000520265 LUMP51884 338 aaPredicted RBP11.13□□□□□ -0.63
VEGFA-221ENST00000520265 FOXE3Q13461 319 aa11.13□□□□□ -0.63
VEGFA-221ENST00000520265 SRSF7Q16629 238 aaKnown RBP eCLIP11.13□□□□□ -0.637e-11■□□□□ 9.1
VEGFA-221ENST00000520265 DEFB136Q30KP8 78 aa11.13□□□□□ -0.63
VEGFA-221ENST00000520265 OR2B11Q5JQS5 317 aa11.13□□□□□ -0.63
VEGFA-221ENST00000520265 TMEM69Q5SWH9 247 aa11.13□□□□□ -0.63
VEGFA-221ENST00000520265 BVESQ8NE79 360 aa11.13□□□□□ -0.63
VEGFA-221ENST00000520265 GRPEL2Q8TAA5 225 aa11.13□□□□□ -0.63
VEGFA-221ENST00000520265 S100A16Q96FQ6 103 aaKnown RBP11.13□□□□□ -0.63
VEGFA-221ENST00000520265 DCUN1D5Q9BTE7 237 aa11.13□□□□□ -0.63
VEGFA-221ENST00000520265 ANXA10Q9UJ72 324 aa11.13□□□□□ -0.63
VEGFA-221ENST00000520265 CMYA5Q8N3K9 4069 aa11.13□□□□□ -0.63
VEGFA-221ENST00000520265 A0A1W2PN81 502 aa11.12□□□□□ -0.63
VEGFA-221ENST00000520265 NDUFA3O95167 84 aa11.12□□□□□ -0.63
VEGFA-221ENST00000520265 CNIH1O95406 144 aa11.12□□□□□ -0.63
VEGFA-221ENST00000520265 DIRAS3O95661 229 aa11.12□□□□□ -0.63
VEGFA-221ENST00000520265 CA2P00918 260 aa11.12□□□□□ -0.63
VEGFA-221ENST00000520265 ELANEP08246 267 aa11.12□□□□□ -0.63
VEGFA-221ENST00000520265 CHRNA7P36544 502 aa11.12□□□□□ -0.63
VEGFA-221ENST00000520265 PSG5Q15238 335 aa11.12□□□□□ -0.63
VEGFA-221ENST00000520265 PDLIM3Q53GG5 364 aaPredicted RBP11.12□□□□□ -0.63
VEGFA-221ENST00000520265 CNIH2Q6PI25 160 aa11.12□□□□□ -0.63
VEGFA-221ENST00000520265 Q6ZS49 121 aa11.12□□□□□ -0.63
VEGFA-221ENST00000520265 GVQW1Q8N7I0 195 aa11.12□□□□□ -0.63
VEGFA-221ENST00000520265 BEST4Q8NFU0 473 aa11.12□□□□□ -0.63
VEGFA-221ENST00000520265 OR5B12Q96R08 314 aa11.12□□□□□ -0.63
VEGFA-221ENST00000520265 FAM103A1Q9BTL3 118 aaKnown RBP11.12□□□□□ -0.63
VEGFA-221ENST00000520265 COMMD3Q9UBI1 195 aa11.12□□□□□ -0.63
VEGFA-221ENST00000520265 PLXNB1O43157 2135 aa11.12□□□□□ -0.63
VEGFA-221ENST00000520265 A0A0A6YYH2 397 aa11.11□□□□□ -0.63
VEGFA-221ENST00000520265 A6NJ64 397 aa11.11□□□□□ -0.63
VEGFA-221ENST00000520265 FCN1O00602 326 aa11.11□□□□□ -0.63
VEGFA-221ENST00000520265 PROP1O75360 226 aa11.11□□□□□ -0.63
VEGFA-221ENST00000520265 CRYZL1O95825 349 aa11.11□□□□□ -0.63
VEGFA-221ENST00000520265 IGF1P05019 195 aa11.11□□□□□ -0.63
VEGFA-221ENST00000520265 SMIM18P0DKX4 95 aa11.11□□□□□ -0.63
VEGFA-221ENST00000520265 CX3CL1P78423 397 aa11.11□□□□□ -0.63
VEGFA-221ENST00000520265 NDPQ00604 133 aa11.11□□□□□ -0.63
VEGFA-221ENST00000520265 SAMD5Q5TGI4 173 aa11.11□□□□□ -0.63
VEGFA-221ENST00000520265 ZNF660Q6AZW8 331 aaPredicted RBP11.11□□□□□ -0.63
VEGFA-221ENST00000520265 UNQ5815/PRO19632Q6UWF5 114 aa11.11□□□□□ -0.63
VEGFA-221ENST00000520265 PPP1R27Q86WC6 154 aa11.11□□□□□ -0.63
VEGFA-221ENST00000520265 ZNF645Q8N7E2 425 aa11.11□□□□□ -0.63
VEGFA-221ENST00000520265 CASTOR1Q8WTX7 329 aa11.11□□□□□ -0.63
VEGFA-221ENST00000520265 SECTM1Q8WVN6 248 aa11.11□□□□□ -0.63
VEGFA-221ENST00000520265 DPF1Q92782 380 aa11.11□□□□□ -0.63
VEGFA-221ENST00000520265 ADTRPQ96IZ2 230 aa11.11□□□□□ -0.63
VEGFA-221ENST00000520265 TOLLIPQ9H0E2 274 aa11.11□□□□□ -0.63
VEGFA-221ENST00000520265 AUNIPQ9H7T9 357 aa11.11□□□□□ -0.63
VEGFA-221ENST00000520265 TPSG1Q9NRR2 321 aa11.11□□□□□ -0.63
VEGFA-221ENST00000520265 OR2W1Q9Y3N9 320 aa11.11□□□□□ -0.63
VEGFA-221ENST00000520265 FCGR3BO75015 233 aa11.1□□□□□ -0.63
VEGFA-221ENST00000520265 TMEM127O75204 238 aa11.1□□□□□ -0.63
VEGFA-221ENST00000520265 SPDEFO95238 335 aa11.1□□□□□ -0.63
VEGFA-221ENST00000520265 IGHG4P01861 327 aa11.1□□□□□ -0.63
VEGFA-221ENST00000520265 CD40LGP29965 261 aa11.1□□□□□ -0.63
VEGFA-221ENST00000520265 FXYD4P59646 89 aa11.1□□□□□ -0.63
VEGFA-221ENST00000520265 TMEM267Q0VDI3 215 aaPredicted RBP11.1□□□□□ -0.63
VEGFA-221ENST00000520265 BEAN1Q3B7T3 259 aa11.1□□□□□ -0.63
VEGFA-221ENST00000520265 GPR107Q5VW38 600 aa11.1□□□□□ -0.63
VEGFA-221ENST00000520265 KCTD9Q7L273 389 aa11.1□□□□□ -0.63
VEGFA-221ENST00000520265 OR13F1Q8NGS4 319 aa11.1□□□□□ -0.63
VEGFA-221ENST00000520265 TCTEX1D2Q8WW35 142 aa11.1□□□□□ -0.63
VEGFA-221ENST00000520265 ARPC1AQ92747 370 aa11.1□□□□□ -0.63
VEGFA-221ENST00000520265 SLC25A46Q96AG3 418 aa11.1□□□□□ -0.63
VEGFA-221ENST00000520265 C5orf30Q96GV9 206 aa11.1□□□□□ -0.63
VEGFA-221ENST00000520265 PHB2Q99623 299 aa11.1□□□□□ -0.63
VEGFA-221ENST00000520265 RNF5Q99942 180 aa11.1□□□□□ -0.63
VEGFA-221ENST00000520265 MRPS26Q9BYN8 205 aaKnown RBP11.1□□□□□ -0.63
VEGFA-221ENST00000520265 ZNF355PQ9NSJ1 428 aa11.1□□□□□ -0.63
VEGFA-221ENST00000520265 NECAP2Q9NVZ3 263 aa11.1□□□□□ -0.63
VEGFA-221ENST00000520265 GAB2Q9UQC2 676 aa11.1□□□□□ -0.63
VEGFA-221ENST00000520265 FOXA2Q9Y261 457 aaPredicted RBP11.1□□□□□ -0.63
VEGFA-221ENST00000520265 MRPS7Q9Y2R9 242 aaKnown RBP11.1□□□□□ -0.63
VEGFA-221ENST00000520265 PRELID3BQ9Y3B1 194 aa11.1□□□□□ -0.63
VEGFA-221ENST00000520265 MEGF8Q7Z7M0 2845 aa11.1□□□□□ -0.63
VEGFA-221ENST00000520265 SMIM31A0A1B0GVY4 71 aa11.09□□□□□ -0.63
VEGFA-221ENST00000520265 FAM25AB3EWG3 89 aa11.09□□□□□ -0.63
VEGFA-221ENST00000520265 FAM25CB3EWG5 89 aa11.09□□□□□ -0.63
VEGFA-221ENST00000520265 FAM25GB3EWG6 89 aa11.09□□□□□ -0.63
VEGFA-221ENST00000520265 CCL24O00175 119 aa11.09□□□□□ -0.63
VEGFA-221ENST00000520265 XRCC3O43542 346 aa11.09□□□□□ -0.63
VEGFA-221ENST00000520265 RRASP10301 218 aa11.09□□□□□ -0.63
VEGFA-221ENST00000520265 SLC6A1P30531 599 aa11.09□□□□□ -0.63
VEGFA-221ENST00000520265 FCGR2CP31995 323 aa11.09□□□□□ -0.63
VEGFA-221ENST00000520265 MYCNOSP40205 109 aa11.09□□□□□ -0.63
VEGFA-221ENST00000520265 CBX5P45973 191 aa11.09□□□□□ -0.63
VEGFA-221ENST00000520265 TAS2R20P59543 309 aa11.09□□□□□ -0.63
VEGFA-221ENST00000520265 FXYD3Q14802 87 aa11.09□□□□□ -0.63
VEGFA-221ENST00000520265 VMA21Q3ZAQ7 101 aa11.09□□□□□ -0.63
VEGFA-221ENST00000520265 ETV3LQ6ZN32 361 aa11.09□□□□□ -0.63
VEGFA-221ENST00000520265 GPR141Q7Z602 305 aa11.09□□□□□ -0.63
VEGFA-221ENST00000520265 MRPL41Q8IXM3 137 aaKnown RBP11.09□□□□□ -0.63
VEGFA-221ENST00000520265 RCC1LQ96I51 464 aaKnown RBP11.09□□□□□ -0.63
VEGFA-221ENST00000520265 NAA50Q9GZZ1 169 aaKnown RBP11.09□□□□□ -0.63
VEGFA-221ENST00000520265 TAS2R8Q9NYW2 309 aa11.09□□□□□ -0.63
VEGFA-221ENST00000520265 FBXO7Q9Y3I1 522 aa11.09□□□□□ -0.63
VEGFA-221ENST00000520265 IGKV1D-13A0A0B4J2D9 117 aa11.08□□□□□ -0.64
VEGFA-221ENST00000520265 TRIM64CA6NLI5 447 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms