RNA–Protein interactions for RNA: ENST00000518885.1

CNOT7-204, Transcript of CCR4-NOT transcription complex subunit 7, human

TSL 3

Gene CNOT7, Length 477 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CNOT7-204	ENST00000518885	CD40LG	P29965	261 aa		18.94	■□□□□ 0.62
CNOT7-204	ENST00000518885	LGALS7	P47929	136 aa		18.94	■□□□□ 0.62
CNOT7-204	ENST00000518885	ZNF383	Q8NA42	475 aa		18.94	■□□□□ 0.62
CNOT7-204	ENST00000518885	C4orf3	Q8WVX3	66 aa		18.94	■□□□□ 0.62
CNOT7-204	ENST00000518885	RBMXL1	Q96E39	390 aa	Known RBP	18.94	■□□□□ 0.62
CNOT7-204	ENST00000518885	SDHAF2	Q9NX18	166 aa		18.94	■□□□□ 0.62
CNOT7-204	ENST00000518885	WSB1	Q9Y6I7	421 aa		18.94	■□□□□ 0.62
CNOT7-204	ENST00000518885	TMEM235	A6NFC5	223 aa		18.93	■□□□□ 0.62
CNOT7-204	ENST00000518885	CCL24	O00175	119 aa		18.93	■□□□□ 0.62
CNOT7-204	ENST00000518885	CLEC2L	P0C7M8	214 aa		18.93	■□□□□ 0.62
CNOT7-204	ENST00000518885	CX3CL1	P78423	397 aa		18.93	■□□□□ 0.62
CNOT7-204	ENST00000518885	PSG5	Q15238	335 aa		18.93	■□□□□ 0.62
CNOT7-204	ENST00000518885	ZNF260	Q3ZCT1	412 aa		18.93	■□□□□ 0.62
CNOT7-204	ENST00000518885	PYHIN1	Q6K0P9	492 aa		18.93	■□□□□ 0.62
CNOT7-204	ENST00000518885	CNIH2	Q6PI25	160 aa		18.93	■□□□□ 0.62
CNOT7-204	ENST00000518885	ETV3L	Q6ZN32	361 aa		18.93	■□□□□ 0.62
CNOT7-204	ENST00000518885	H1FOO	Q8IZA3	346 aa	Predicted RBP	18.93	■□□□□ 0.62
CNOT7-204	ENST00000518885	RNF167	Q9H6Y7	350 aa		18.93	■□□□□ 0.62
CNOT7-204	ENST00000518885	PROP1	O75360	226 aa		18.92	■□□□□ 0.62
CNOT7-204	ENST00000518885	IGKV1-16	P04430	117 aa		18.92	■□□□□ 0.62
CNOT7-204	ENST00000518885	PPIF	P30405	207 aa	Known RBP	18.92	■□□□□ 0.62
CNOT7-204	ENST00000518885	CRIP2	P52943	208 aa	Predicted RBP	18.92	■□□□□ 0.62
CNOT7-204	ENST00000518885	FOXB2	Q5VYV0	432 aa		18.92	■□□□□ 0.62
CNOT7-204	ENST00000518885	ZNF562	Q6V9R5	426 aa		18.92	■□□□□ 0.62
CNOT7-204	ENST00000518885	NUDCD2	Q8WVJ2	157 aa		18.92	■□□□□ 0.62
CNOT7-204	ENST00000518885	UBE2E2	Q96LR5	201 aa		18.92	■□□□□ 0.62
CNOT7-204	ENST00000518885	P2RX4	Q99571	388 aa		18.92	■□□□□ 0.62
CNOT7-204	ENST00000518885	SPATA2	Q9UM82	520 aa		18.92	■□□□□ 0.62
CNOT7-204	ENST00000518885	FOXA2	Q9Y261	457 aa	Predicted RBP	18.92	■□□□□ 0.62
CNOT7-204	ENST00000518885	IGLV1-40	P01703	118 aa		18.91	■□□□□ 0.62
CNOT7-204	ENST00000518885	LUM	P51884	338 aa	Predicted RBP	18.91	■□□□□ 0.62
CNOT7-204	ENST00000518885	ECSCR	Q19T08	205 aa		18.91	■□□□□ 0.62
CNOT7-204	ENST00000518885	MINDY2	Q8NBR6	621 aa		18.91	■□□□□ 0.62
CNOT7-204	ENST00000518885	ANXA10	Q9UJ72	324 aa		18.91	■□□□□ 0.62
CNOT7-204	ENST00000518885	ELF5	Q9UKW6	265 aa	Predicted RBP	18.91	■□□□□ 0.62
CNOT7-204	ENST00000518885	VSIG4	Q9Y279	399 aa		18.91	■□□□□ 0.62
CNOT7-204	ENST00000518885	TRAV18	A0A075B6X5	111 aa		18.9	■□□□□ 0.62
CNOT7-204	ENST00000518885		G3V318	75 aa		18.9	■□□□□ 0.62
CNOT7-204	ENST00000518885	RAB25	P57735	213 aa		18.9	■□□□□ 0.62
CNOT7-204	ENST00000518885	ARPC4	P59998	168 aa		18.9	■□□□□ 0.62
CNOT7-204	ENST00000518885	LCNL1	Q6ZST4	164 aa		18.9	■□□□□ 0.62
CNOT7-204	ENST00000518885	C18orf65	Q6ZTR6	163 aa		18.9	■□□□□ 0.62
CNOT7-204	ENST00000518885	PPP1R27	Q86WC6	154 aa		18.9	■□□□□ 0.62
CNOT7-204	ENST00000518885	OR5M8	Q8NGP6	311 aa		18.9	■□□□□ 0.62
CNOT7-204	ENST00000518885	RAX2	Q96IS3	184 aa		18.9	■□□□□ 0.62
CNOT7-204	ENST00000518885	OR2W1	Q9Y3N9	320 aa		18.9	■□□□□ 0.62
CNOT7-204	ENST00000518885	CBX5	P45973	191 aa		18.89	■□□□□ 0.61
CNOT7-204	ENST00000518885	AKIRIN2	Q53H80	203 aa		18.89	■□□□□ 0.61
CNOT7-204	ENST00000518885	ZNF645	Q8N7E2	425 aa		18.89	■□□□□ 0.61
CNOT7-204	ENST00000518885	SLC25A38	Q96DW6	304 aa		18.89	■□□□□ 0.61
CNOT7-204	ENST00000518885	YIPF6	Q96EC8	236 aa		18.89	■□□□□ 0.61
CNOT7-204	ENST00000518885	S100A16	Q96FQ6	103 aa	Known RBP	18.89	■□□□□ 0.61
CNOT7-204	ENST00000518885	HARBI1	Q96MB7	349 aa		18.89	■□□□□ 0.61
CNOT7-204	ENST00000518885	CLCC1	Q96S66	551 aa		18.89	■□□□□ 0.61
CNOT7-204	ENST00000518885		A0A1W2PN81	502 aa		18.88	■□□□□ 0.61
CNOT7-204	ENST00000518885	SHOX	O15266	292 aa		18.88	■□□□□ 0.61
CNOT7-204	ENST00000518885	SLC25A17	O43808	307 aa		18.88	■□□□□ 0.61
CNOT7-204	ENST00000518885	CNIH1	O95406	144 aa		18.88	■□□□□ 0.61
CNOT7-204	ENST00000518885	CA2	P00918	260 aa		18.88	■□□□□ 0.61
CNOT7-204	ENST00000518885	CHRNA7	P36544	502 aa		18.88	■□□□□ 0.61
CNOT7-204	ENST00000518885	RAB9A	P51151	201 aa		18.88	■□□□□ 0.61
CNOT7-204	ENST00000518885	ACTBL2	Q562R1	376 aa		18.88	■□□□□ 0.61
CNOT7-204	ENST00000518885	OR5H6	Q8NGV6	325 aa		18.88	■□□□□ 0.61
CNOT7-204	ENST00000518885	MRAP	Q8TCY5	172 aa		18.88	■□□□□ 0.61
CNOT7-204	ENST00000518885	MYOZ3	Q8TDC0	251 aa		18.88	■□□□□ 0.61
CNOT7-204	ENST00000518885	ARPC1A	Q92747	370 aa		18.88	■□□□□ 0.61
CNOT7-204	ENST00000518885	AURKAIP1	Q9NWT8	199 aa	Predicted RBP	18.88	■□□□□ 0.61
CNOT7-204	ENST00000518885	PRELID3B	Q9Y3B1	194 aa		18.88	■□□□□ 0.61
CNOT7-204	ENST00000518885	A3GALT2	U3KPV4	340 aa		18.88	■□□□□ 0.61
CNOT7-204	ENST00000518885	NOTCH3	Q9UM47	2321 aa		18.88	■□□□□ 0.61
CNOT7-204	ENST00000518885	IGKV1D-8	A0A087WSZ0	117 aa		18.87	■□□□□ 0.61
CNOT7-204	ENST00000518885	TMEM177	Q53S58	311 aa		18.87	■□□□□ 0.61
CNOT7-204	ENST00000518885	ZNF491	Q8N8L2	437 aa		18.87	■□□□□ 0.61
CNOT7-204	ENST00000518885	BVES	Q8NE79	360 aa		18.87	■□□□□ 0.61
CNOT7-204	ENST00000518885	BEST4	Q8NFU0	473 aa		18.87	■□□□□ 0.61
CNOT7-204	ENST00000518885	MRPS7	Q9Y2R9	242 aa	Known RBP	18.87	■□□□□ 0.61
CNOT7-204	ENST00000518885	NUBP2	Q9Y5Y2	271 aa		18.87	■□□□□ 0.61
CNOT7-204	ENST00000518885	TG	P01266	2768 aa		18.86	■□□□□ 0.61
CNOT7-204	ENST00000518885	FCN1	O00602	326 aa		18.86	■□□□□ 0.61
CNOT7-204	ENST00000518885	CREBL2	O60519	120 aa	Predicted RBP	18.86	■□□□□ 0.61
CNOT7-204	ENST00000518885	HLA-DQB1	P01920	261 aa		18.86	■□□□□ 0.61
CNOT7-204	ENST00000518885	PRB2	P02812	416 aa	Predicted RBP	18.86	■□□□□ 0.61
CNOT7-204	ENST00000518885	OR8U8	P0C7N1	319 aa		18.86	■□□□□ 0.61
CNOT7-204	ENST00000518885	DUT	P33316	252 aa	Known RBP	18.86	■□□□□ 0.61
CNOT7-204	ENST00000518885	LINC00205	P59089	165 aa		18.86	■□□□□ 0.61
CNOT7-204	ENST00000518885	NDP	Q00604	133 aa		18.86	■□□□□ 0.61
CNOT7-204	ENST00000518885	RUNX1	Q01196	453 aa		18.86	■□□□□ 0.61
CNOT7-204	ENST00000518885	VMA21	Q3ZAQ7	101 aa		18.86	■□□□□ 0.61
CNOT7-204	ENST00000518885	UBE2NL	Q5JXB2	153 aa		18.86	■□□□□ 0.61
CNOT7-204	ENST00000518885	UNQ5815/PRO19632	Q6UWF5	114 aa		18.86	■□□□□ 0.61
CNOT7-204	ENST00000518885	OSR1	Q8TAX0	266 aa	Predicted RBP	18.86	■□□□□ 0.61
CNOT7-204	ENST00000518885	KCTD12	Q96CX2	325 aa	Known RBP	18.86	■□□□□ 0.61
CNOT7-204	ENST00000518885	SLA2	Q9H6Q3	261 aa		18.86	■□□□□ 0.61
CNOT7-204	ENST00000518885	SSX5	O60225	188 aa		18.85	■□□□□ 0.61
CNOT7-204	ENST00000518885	NFYA	P23511	347 aa	Predicted RBP	18.85	■□□□□ 0.61
CNOT7-204	ENST00000518885	LSM3	P62310	102 aa	Known RBP	18.85	■□□□□ 0.61
CNOT7-204	ENST00000518885	FXYD3	Q14802	87 aa		18.85	■□□□□ 0.61
CNOT7-204	ENST00000518885	DEFB136	Q30KP8	78 aa		18.85	■□□□□ 0.61
CNOT7-204	ENST00000518885	OR11H1	Q8NG94	326 aa		18.85	■□□□□ 0.61
CNOT7-204	ENST00000518885	TMEM68	Q96MH6	324 aa		18.85	■□□□□ 0.61

Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms