RNA–Protein interactions for RNA: ENST00000517490.5

CPNE3-203, Transcript of copine 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE3, Length 4,865 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-203ENST00000517490 TRA2AQ13595 282 aaKnown RBP eCLIP5.68□□□□□ -1.5
CPNE3-203ENST00000517490 SPATA45Q537H7 98 aa5.68□□□□□ -1.5
CPNE3-203ENST00000517490 CYB5R2Q6BCY4 276 aa5.68□□□□□ -1.5
CPNE3-203ENST00000517490 OR2Y1Q8NGV0 311 aa5.68□□□□□ -1.5
CPNE3-203ENST00000517490 ABHD3Q8WU67 409 aa5.68□□□□□ -1.5
CPNE3-203ENST00000517490 SRXN1Q9BYN0 137 aa5.68□□□□□ -1.5
CPNE3-203ENST00000517490 VCX2Q9H322 139 aa5.68□□□□□ -1.5
CPNE3-203ENST00000517490 TECRQ9NZ01 308 aaKnown RBP5.68□□□□□ -1.5
CPNE3-203ENST00000517490 PLA2G2EQ9NZK7 142 aa5.68□□□□□ -1.5
CPNE3-203ENST00000517490 OR1A1Q9P1Q5 309 aa5.68□□□□□ -1.5
CPNE3-203ENST00000517490 IGLV3-12A0A075B6K2 115 aa5.68□□□□□ -1.5
CPNE3-203ENST00000517490 IGKV1-12A0A0C4DH73 117 aa5.68□□□□□ -1.5
CPNE3-203ENST00000517490 IGKV1D-12P01611 117 aa5.68□□□□□ -1.5
CPNE3-203ENST00000517490 APOA2P02652 100 aa5.68□□□□□ -1.5
CPNE3-203ENST00000517490 TMPRSS7Q7RTY8 843 aa5.68□□□□□ -1.5
CPNE3-203ENST00000517490 SPEM1Q8N4L4 309 aa5.68□□□□□ -1.5
CPNE3-203ENST00000517490 ZNF738Q8NE65 137 aa5.68□□□□□ -1.5
CPNE3-203ENST00000517490 IMMP2LQ96T52 175 aa5.68□□□□□ -1.5
CPNE3-203ENST00000517490 CHCHD2Q9Y6H1 151 aaPredicted RBP5.68□□□□□ -1.5
CPNE3-203ENST00000517490 DENND4AQ7Z401 1863 aa5.68□□□□□ -1.5
CPNE3-203ENST00000517490 CBY3A6NI87 242 aa5.68□□□□□ -1.5
CPNE3-203ENST00000517490 CLDN14O95500 239 aa5.68□□□□□ -1.5
CPNE3-203ENST00000517490 ASCL4Q6XD76 172 aa5.68□□□□□ -1.5
CPNE3-203ENST00000517490 Q6ZS49 121 aa5.68□□□□□ -1.5
CPNE3-203ENST00000517490 C1orf162Q8NEQ5 155 aaPredicted RBP5.68□□□□□ -1.5
CPNE3-203ENST00000517490 MRGPRDQ8TDS7 321 aa5.68□□□□□ -1.5
CPNE3-203ENST00000517490 NABP1Q96AH0 204 aa5.68□□□□□ -1.5
CPNE3-203ENST00000517490 CLUHP3Q96NS8 147 aa5.68□□□□□ -1.5
CPNE3-203ENST00000517490 NPCDR1Q9BY65 106 aa5.68□□□□□ -1.5
CPNE3-203ENST00000517490 VSIRQ9H7M9 311 aa5.68□□□□□ -1.5
CPNE3-203ENST00000517490 ARHGEF17Q96PE2 2063 aaPredicted RBP5.68□□□□□ -1.5
CPNE3-203ENST00000517490 IGKV1-27A0A075B6S5 117 aa5.68□□□□□ -1.5
CPNE3-203ENST00000517490 IGHV5-10-1A0A0J9YXX1 117 aa5.68□□□□□ -1.5
CPNE3-203ENST00000517490 GRIFINA4D1Z8 144 aa5.68□□□□□ -1.5
CPNE3-203ENST00000517490 C5orf63A6NC05 138 aa5.68□□□□□ -1.5
CPNE3-203ENST00000517490 LRRC30A6NM36 301 aa5.68□□□□□ -1.5
CPNE3-203ENST00000517490 ATXN7O15265 892 aaPredicted RBP5.68□□□□□ -1.5
CPNE3-203ENST00000517490 USF1P22415 310 aaPredicted RBP5.68□□□□□ -1.5
CPNE3-203ENST00000517490 OTX1P32242 354 aaPredicted RBP5.68□□□□□ -1.5
CPNE3-203ENST00000517490 RAB7AP51149 207 aa5.68□□□□□ -1.5
CPNE3-203ENST00000517490 ACTL10Q5JWF8 245 aa5.68□□□□□ -1.5
CPNE3-203ENST00000517490 RNASEKQ6P5S7 137 aaKnown RBP5.68□□□□□ -1.5
CPNE3-203ENST00000517490 CNEP1R1Q8N9A8 125 aa5.68□□□□□ -1.5
CPNE3-203ENST00000517490 OR4P4Q8NGL7 312 aa5.68□□□□□ -1.5
CPNE3-203ENST00000517490 C1QTNF5Q9BXJ0 243 aa5.68□□□□□ -1.5
CPNE3-203ENST00000517490 PXMP4Q9Y6I8 212 aa5.68□□□□□ -1.5
CPNE3-203ENST00000517490 IL3RAP26951 378 aa5.67□□□□□ -1.5
CPNE3-203ENST00000517490 EPHA8P29322 1005 aaPredicted RBP5.67□□□□□ -1.5
CPNE3-203ENST00000517490 SUB1P53999 127 aaKnown RBP eCLIP5.67□□□□□ -1.57e-8■■■■■ 65.2
CPNE3-203ENST00000517490 PMCHL1Q16048 86 aa5.67□□□□□ -1.5
CPNE3-203ENST00000517490 SLC23A3Q6PIS1 610 aa5.67□□□□□ -1.5
CPNE3-203ENST00000517490 DRAM1Q8N682 238 aa5.67□□□□□ -1.5
CPNE3-203ENST00000517490 POM121L2Q96KW2 1035 aa5.67□□□□□ -1.5
CPNE3-203ENST00000517490 PHF7Q9BWX1 381 aaPredicted RBP5.67□□□□□ -1.5
CPNE3-203ENST00000517490 TMEM106BQ9NUM4 274 aa5.67□□□□□ -1.5
CPNE3-203ENST00000517490 TRAV38-1A0A0B4J264 116 aa5.67□□□□□ -1.5
CPNE3-203ENST00000517490 FOXI3A8MTJ6 420 aaPredicted RBP5.67□□□□□ -1.5
CPNE3-203ENST00000517490 B4E171 279 aa5.67□□□□□ -1.5
CPNE3-203ENST00000517490 M0R2Z0 102 aa5.67□□□□□ -1.5
CPNE3-203ENST00000517490 OR2H2O95918 312 aa5.67□□□□□ -1.5
CPNE3-203ENST00000517490 HLA-DQA1P01909 254 aa5.67□□□□□ -1.5
CPNE3-203ENST00000517490 APCSP02743 223 aa5.67□□□□□ -1.5
CPNE3-203ENST00000517490 TEPPQ6URK8 271 aa5.67□□□□□ -1.5
CPNE3-203ENST00000517490 LINC00696Q6ZRV3 163 aa5.67□□□□□ -1.5
CPNE3-203ENST00000517490 WDFY1Q8IWB7 410 aa5.67□□□□□ -1.5
CPNE3-203ENST00000517490 RFESDQ8TAC1 157 aa5.67□□□□□ -1.5
CPNE3-203ENST00000517490 SSMEM1Q8WWF3 244 aa5.67□□□□□ -1.5
CPNE3-203ENST00000517490 RNF2Q99496 336 aa5.67□□□□□ -1.5
CPNE3-203ENST00000517490 OR2J1Q9GZK6 312 aa5.67□□□□□ -1.5
CPNE3-203ENST00000517490 IL19Q9UHD0 177 aa5.67□□□□□ -1.5
CPNE3-203ENST00000517490 RPH3ALQ9UNE2 315 aa5.67□□□□□ -1.5
CPNE3-203ENST00000517490 KLF13Q9Y2Y9 288 aaPredicted RBP5.67□□□□□ -1.5
CPNE3-203ENST00000517490 IGHV1-45A0A0A0MS14 117 aa5.67□□□□□ -1.5
CPNE3-203ENST00000517490 DEFB108AA8MXU0 73 aa5.67□□□□□ -1.5
CPNE3-203ENST00000517490 CDIPTO14735 213 aa5.67□□□□□ -1.5
CPNE3-203ENST00000517490 CHEK1O14757 476 aa5.67□□□□□ -1.5
CPNE3-203ENST00000517490 ZG16O60844 167 aa5.67□□□□□ -1.5
CPNE3-203ENST00000517490 PSG5Q15238 335 aa5.67□□□□□ -1.5
CPNE3-203ENST00000517490 HLA-BQ31612 363 aa5.67□□□□□ -1.5
CPNE3-203ENST00000517490 NRN1LQ496H8 165 aa5.67□□□□□ -1.5
CPNE3-203ENST00000517490 TMEM42Q69YG0 159 aa5.67□□□□□ -1.5
CPNE3-203ENST00000517490 NPVFQ9HCQ7 196 aa5.67□□□□□ -1.5
CPNE3-203ENST00000517490 ASCC3Q8N3C0 2202 aaKnown RBP5.67□□□□□ -1.5
CPNE3-203ENST00000517490 TMEM210A6NLX4 147 aa5.66□□□□□ -1.5
CPNE3-203ENST00000517490 ETV2O00321 342 aaPredicted RBP5.66□□□□□ -1.5
CPNE3-203ENST00000517490 WISP1O95388 367 aa5.66□□□□□ -1.5
CPNE3-203ENST00000517490 CRYABP02511 175 aaKnown RBP5.66□□□□□ -1.5
CPNE3-203ENST00000517490 ADH4P08319 380 aa5.66□□□□□ -1.5
CPNE3-203ENST00000517490 CHRNB4P30926 498 aa5.66□□□□□ -1.5
CPNE3-203ENST00000517490 TCL1AP56279 114 aa5.66□□□□□ -1.5
CPNE3-203ENST00000517490 OR1C1Q15619 314 aa5.66□□□□□ -1.5
CPNE3-203ENST00000517490 LEMD1Q68G75 181 aa5.66□□□□□ -1.5
CPNE3-203ENST00000517490 FOXL2NBQ6ZUU3 175 aa5.66□□□□□ -1.5
CPNE3-203ENST00000517490 ZNF837Q96EG3 531 aaPredicted RBP5.66□□□□□ -1.5
CPNE3-203ENST00000517490 SIGLEC12Q96PQ1 595 aa5.66□□□□□ -1.5
CPNE3-203ENST00000517490 LRFN3Q9BTN0 628 aa5.66□□□□□ -1.5
CPNE3-203ENST00000517490 PARD6GQ9BYG4 376 aaPredicted RBP5.66□□□□□ -1.5
CPNE3-203ENST00000517490 IL36BQ9NZH7 164 aa5.66□□□□□ -1.5
CPNE3-203ENST00000517490 WNT16Q9UBV4 365 aa5.66□□□□□ -1.5
CPNE3-203ENST00000517490 IGHV3-43A0A0B4J1X8 118 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 81.8 ms