RNA–Protein interactions for RNA: ENST00000514610.1

HMGCS1-207, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 2

Gene HMGCS1, Length 555 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-207ENST00000514610 UBE2G2P60604 165 aa1.72□□□□□ -2.13
HMGCS1-207ENST00000514610 SNAP25P60880 206 aa1.72□□□□□ -2.13
HMGCS1-207ENST00000514610 SDHAF4Q5VUM1 108 aa1.72□□□□□ -2.13
HMGCS1-207ENST00000514610 DNM1P34Q6PK57 102 aa1.72□□□□□ -2.13
HMGCS1-207ENST00000514610 DRAM2Q6UX65 266 aa1.72□□□□□ -2.13
HMGCS1-207ENST00000514610 SPATA12Q7Z6I5 190 aa1.72□□□□□ -2.13
HMGCS1-207ENST00000514610 PACRGLQ8N7B6 248 aa1.72□□□□□ -2.13
HMGCS1-207ENST00000514610 OR4X2Q8NGF9 303 aa1.72□□□□□ -2.13
HMGCS1-207ENST00000514610 RPS4Y2Q8TD47 263 aa1.72□□□□□ -2.13
HMGCS1-207ENST00000514610 RNASE6Q93091 150 aaKnown RBP1.72□□□□□ -2.13
HMGCS1-207ENST00000514610 DCUN1D5Q9BTE7 237 aa1.72□□□□□ -2.13
HMGCS1-207ENST00000514610 SLC22A4Q9H015 551 aa1.72□□□□□ -2.13
HMGCS1-207ENST00000514610 NDUFB11Q9NX14 153 aa1.72□□□□□ -2.13
HMGCS1-207ENST00000514610 FAM215AQ9Y5M1 114 aa1.72□□□□□ -2.13
HMGCS1-207ENST00000514610 RTEL1-TNFRSF6BF6WH68 1400 aa1.72□□□□□ -2.13
HMGCS1-207ENST00000514610 SCN9AQ15858 1988 aa1.72□□□□□ -2.13
HMGCS1-207ENST00000514610 IGLV3-9A0A075B6K5 115 aa1.71□□□□□ -2.14
HMGCS1-207ENST00000514610 XCL1P47992 114 aa1.71□□□□□ -2.14
HMGCS1-207ENST00000514610 GNA13Q14344 377 aa1.71□□□□□ -2.14
HMGCS1-207ENST00000514610 CD302Q8IX05 232 aa1.71□□□□□ -2.14
HMGCS1-207ENST00000514610 BAP18Q8IXM2 172 aa1.71□□□□□ -2.14
HMGCS1-207ENST00000514610 LRRC34Q8IZ02 419 aa1.71□□□□□ -2.14
HMGCS1-207ENST00000514610 DAND5Q8N907 189 aa1.71□□□□□ -2.14
HMGCS1-207ENST00000514610 DNAJB3Q8WWF6 145 aa1.71□□□□□ -2.14
HMGCS1-207ENST00000514610 MDC1Q14676 2089 aaKnown RBP1.71□□□□□ -2.14
HMGCS1-207ENST00000514610 THSD7AQ9UPZ6 1657 aa1.71□□□□□ -2.14
HMGCS1-207ENST00000514610 ARRDC5A6NEK1 342 aa1.7□□□□□ -2.14
HMGCS1-207ENST00000514610 UBE2L6O14933 153 aa1.7□□□□□ -2.14
HMGCS1-207ENST00000514610 OCMP0CE72 109 aaPredicted RBP1.7□□□□□ -2.14
HMGCS1-207ENST00000514610 HINT1P49773 126 aaPredicted RBP1.7□□□□□ -2.14
HMGCS1-207ENST00000514610 LGALS9BQ3B8N2 356 aa1.7□□□□□ -2.14
HMGCS1-207ENST00000514610 PDPK2PQ6A1A2 396 aa1.7□□□□□ -2.14
HMGCS1-207ENST00000514610 Q6ZS52 159 aa1.7□□□□□ -2.14
HMGCS1-207ENST00000514610 FAM19A5Q7Z5A7 132 aaPredicted RBP1.7□□□□□ -2.14
HMGCS1-207ENST00000514610 CLDND2Q8NHS1 167 aa1.7□□□□□ -2.14
HMGCS1-207ENST00000514610 SPACA4Q8TDM5 124 aa1.7□□□□□ -2.14
HMGCS1-207ENST00000514610 MRPS24Q96EL2 167 aaKnown RBP1.7□□□□□ -2.14
HMGCS1-207ENST00000514610 SLC35G5Q96KT7 338 aa1.7□□□□□ -2.14
HMGCS1-207ENST00000514610 MIEN1Q9BRT3 115 aa1.7□□□□□ -2.14
HMGCS1-207ENST00000514610 TIMM21Q9BVV7 248 aa1.7□□□□□ -2.14
HMGCS1-207ENST00000514610 IMP3Q9NV31 184 aaKnown RBP1.7□□□□□ -2.14
HMGCS1-207ENST00000514610 EMC3Q9P0I2 261 aa1.7□□□□□ -2.14
HMGCS1-207ENST00000514610 A0A1W2PP64 1363 aa1.7□□□□□ -2.14
HMGCS1-207ENST00000514610 DICER1Q9UPY3 1922 aaKnown RBP1.7□□□□□ -2.14
HMGCS1-207ENST00000514610 COCHO43405 550 aa1.69□□□□□ -2.14
HMGCS1-207ENST00000514610 STX10O60499 249 aa1.69□□□□□ -2.14
HMGCS1-207ENST00000514610 HIST1H1CP16403 213 aaKnown RBP1.69□□□□□ -2.14
HMGCS1-207ENST00000514610 CD40LGP29965 261 aa1.69□□□□□ -2.14
HMGCS1-207ENST00000514610 RPL14P50914 215 aaKnown RBP1.69□□□□□ -2.14
HMGCS1-207ENST00000514610 TMEM33P57088 247 aa1.69□□□□□ -2.14
HMGCS1-207ENST00000514610 FABP5Q01469 135 aa1.69□□□□□ -2.14
HMGCS1-207ENST00000514610 Q6ZRN7 208 aaPredicted RBP1.69□□□□□ -2.14
HMGCS1-207ENST00000514610 ASB13Q8WXK3 278 aa1.69□□□□□ -2.14
HMGCS1-207ENST00000514610 CPNE2Q96FN4 548 aaPredicted RBP1.69□□□□□ -2.14
HMGCS1-207ENST00000514610 TIPINQ9BVW5 301 aa1.69□□□□□ -2.14
HMGCS1-207ENST00000514610 PCYT1BQ9Y5K3 369 aaPredicted RBP1.69□□□□□ -2.14
HMGCS1-207ENST00000514610 TMED7-TICAM2A0A0A6YYA0 188 aa1.68□□□□□ -2.14
HMGCS1-207ENST00000514610 A0A1B0GVG6 124 aa1.68□□□□□ -2.14
HMGCS1-207ENST00000514610 A0A1W2PQD3 144 aa1.68□□□□□ -2.14
HMGCS1-207ENST00000514610 J3QQQ9 107 aa1.68□□□□□ -2.14
HMGCS1-207ENST00000514610 HPGDSO60760 199 aa1.68□□□□□ -2.14
HMGCS1-207ENST00000514610 NDUFB2O95178 105 aa1.68□□□□□ -2.14
HMGCS1-207ENST00000514610 IFNGR2P38484 337 aa1.68□□□□□ -2.14
HMGCS1-207ENST00000514610 CD79BP40259 229 aa1.68□□□□□ -2.14
HMGCS1-207ENST00000514610 TAS2R30P59541 319 aa1.68□□□□□ -2.14
HMGCS1-207ENST00000514610 RPL26P61254 145 aaKnown RBP1.68□□□□□ -2.14
HMGCS1-207ENST00000514610 MS4A6EQ96DS6 147 aa1.68□□□□□ -2.14
HMGCS1-207ENST00000514610 SFRP2Q96HF1 295 aa1.68□□□□□ -2.14
HMGCS1-207ENST00000514610 PACRGQ96M98 296 aaPredicted RBP1.68□□□□□ -2.14
HMGCS1-207ENST00000514610 CRCT1Q9UGL9 99 aa1.68□□□□□ -2.14
HMGCS1-207ENST00000514610 RPL26L1Q9UNX3 145 aaKnown RBP1.68□□□□□ -2.14
HMGCS1-207ENST00000514610 KLK5Q9Y337 293 aaPredicted RBP1.68□□□□□ -2.14
HMGCS1-207ENST00000514610 PTPRBP23467 1997 aa1.68□□□□□ -2.14
HMGCS1-207ENST00000514610 SIPA1L1O43166 1804 aa1.68□□□□□ -2.14
HMGCS1-207ENST00000514610 C1orf232A0A0U1RR37 186 aa1.67□□□□□ -2.14
HMGCS1-207ENST00000514610 TEX50A0A1B0GTY4 177 aa1.67□□□□□ -2.14
HMGCS1-207ENST00000514610 C2orf74A8MZ97 194 aa1.67□□□□□ -2.14
HMGCS1-207ENST00000514610 BIRC5O15392 142 aa1.67□□□□□ -2.14
HMGCS1-207ENST00000514610 IL6P05231 212 aa1.67□□□□□ -2.14
HMGCS1-207ENST00000514610 UGT2B7P16662 529 aa1.67□□□□□ -2.14
HMGCS1-207ENST00000514610 RBM11P57052 281 aaKnown RBP1.67□□□□□ -2.14
HMGCS1-207ENST00000514610 ZNF90Q03938 601 aa1.67□□□□□ -2.14
HMGCS1-207ENST00000514610 JOSD1Q15040 202 aaPredicted RBP1.67□□□□□ -2.14
HMGCS1-207ENST00000514610 PLEKHG7Q6ZR37 379 aa1.67□□□□□ -2.14
HMGCS1-207ENST00000514610 Q6ZTI0 123 aa1.67□□□□□ -2.14
HMGCS1-207ENST00000514610 SMCR5Q8TEV8 140 aa1.67□□□□□ -2.14
HMGCS1-207ENST00000514610 TMEM109Q9BVC6 243 aa1.67□□□□□ -2.14
HMGCS1-207ENST00000514610 DERL2Q9GZP9 239 aa1.67□□□□□ -2.14
HMGCS1-207ENST00000514610 POLR3HQ9Y535 204 aaPredicted RBP1.67□□□□□ -2.14
HMGCS1-207ENST00000514610 ZFHX2Q9C0A1 2572 aaPredicted RBP1.67□□□□□ -2.14
HMGCS1-207ENST00000514610 NUMA1Q14980 2115 aa1.67□□□□□ -2.14
HMGCS1-207ENST00000514610 RGS12O14924 1447 aa1.66□□□□□ -2.14
HMGCS1-207ENST00000514610 TRGV5A0A0B4J1U4 118 aa1.66□□□□□ -2.14
HMGCS1-207ENST00000514610 F5H768 121 aa1.66□□□□□ -2.14
HMGCS1-207ENST00000514610 YEATS4O95619 227 aa1.66□□□□□ -2.14
HMGCS1-207ENST00000514610 MT-CO2P00403 227 aa1.66□□□□□ -2.14
HMGCS1-207ENST00000514610 CD24P25063 80 aa1.66□□□□□ -2.14
HMGCS1-207ENST00000514610 RPS24P62847 133 aaKnown RBP1.66□□□□□ -2.14
HMGCS1-207ENST00000514610 HLA-DRB3P79483 266 aa1.66□□□□□ -2.14
HMGCS1-207ENST00000514610 SAPCD1Q5SSQ6 148 aa1.66□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms