RNA–Protein interactions for RNA: ENST00000514307.5

NUP54-214, Transcript of nucleoporin 54, humanhuman

TSL 4

Gene NUP54, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-214ENST00000514307 INO80EQ8NBZ0 244 aaPredicted RBP13.08□□□□□ -0.32
NUP54-214ENST00000514307 POLR3KQ9Y2Y1 108 aaPredicted RBP13.08□□□□□ -0.32
NUP54-214ENST00000514307 MMP24Q9Y5R2 645 aa13.08□□□□□ -0.32
NUP54-214ENST00000514307 RAI1Q7Z5J4 1906 aaPredicted RBP13.07□□□□□ -0.32
NUP54-214ENST00000514307 FXYD6-FXYD2A0A087WZ82 144 aa13.07□□□□□ -0.32
NUP54-214ENST00000514307 IGHV2-26A0A0B4J1V2 119 aa13.07□□□□□ -0.32
NUP54-214ENST00000514307 ST8SIA3O43173 380 aa13.07□□□□□ -0.32
NUP54-214ENST00000514307 FCGR3BO75015 233 aa13.07□□□□□ -0.32
NUP54-214ENST00000514307 HRASP01112 189 aa13.07□□□□□ -0.32
NUP54-214ENST00000514307 GAPDHP04406 335 aaKnown RBP13.07□□□□□ -0.32
NUP54-214ENST00000514307 EPHA1P21709 976 aa13.07□□□□□ -0.32
NUP54-214ENST00000514307 AKR1C2P52895 323 aa13.07□□□□□ -0.32
NUP54-214ENST00000514307 NKX2-5P52952 324 aaPredicted RBP13.07□□□□□ -0.32
NUP54-214ENST00000514307 RTL8BQ17RB0 113 aa13.07□□□□□ -0.32
NUP54-214ENST00000514307 CLEC12BQ2HXU8 276 aa13.07□□□□□ -0.32
NUP54-214ENST00000514307 DHRS7BQ6IAN0 325 aaPredicted RBP13.07□□□□□ -0.32
NUP54-214ENST00000514307 PRSS54Q6PEW0 395 aa13.07□□□□□ -0.32
NUP54-214ENST00000514307 ODF3L1Q8IXM7 274 aa13.07□□□□□ -0.32
NUP54-214ENST00000514307 OR4S2Q8NH73 311 aa13.07□□□□□ -0.32
NUP54-214ENST00000514307 ZNF251Q9BRH9 671 aa13.07□□□□□ -0.32
NUP54-214ENST00000514307 USP9YO00507 2555 aaPredicted RBP13.07□□□□□ -0.32
NUP54-214ENST00000514307 A0A0D9SG52 128 aa13.06□□□□□ -0.32
NUP54-214ENST00000514307 LINC00473A8K010 186 aa13.06□□□□□ -0.32
NUP54-214ENST00000514307 MPTX1A8MV57 137 aa13.06□□□□□ -0.32
NUP54-214ENST00000514307 KIAA1324LA8MWY0 1029 aaPredicted RBP13.06□□□□□ -0.32
NUP54-214ENST00000514307 KRASP01116 189 aa13.06□□□□□ -0.32
NUP54-214ENST00000514307 APOA2P02652 100 aa13.06□□□□□ -0.32
NUP54-214ENST00000514307 PVALBP20472 110 aaPredicted RBP13.06□□□□□ -0.32
NUP54-214ENST00000514307 ZFP36P26651 326 aaKnown RBP13.06□□□□□ -0.32
NUP54-214ENST00000514307 CEACAM3P40198 252 aa13.06□□□□□ -0.32
NUP54-214ENST00000514307 ZNF137PP52743 207 aa13.06□□□□□ -0.32
NUP54-214ENST00000514307 ERVK-16P61578 105 aa13.06□□□□□ -0.32
NUP54-214ENST00000514307 LCN2P80188 198 aa13.06□□□□□ -0.32
NUP54-214ENST00000514307 ZNF816Q0VGE8 651 aaPredicted RBP13.06□□□□□ -0.32
NUP54-214ENST00000514307 LRRC37A5PQ49AS3 106 aa13.06□□□□□ -0.32
NUP54-214ENST00000514307 NMSQ5H8A3 153 aa13.06□□□□□ -0.32
NUP54-214ENST00000514307 H2BFWTQ7Z2G1 175 aa13.06□□□□□ -0.32
NUP54-214ENST00000514307 DRAXINQ8NBI3 349 aaPredicted RBP13.06□□□□□ -0.32
NUP54-214ENST00000514307 OR11H6Q8NGC7 330 aa13.06□□□□□ -0.32
NUP54-214ENST00000514307 OR11H4Q8NGC9 324 aa13.06□□□□□ -0.32
NUP54-214ENST00000514307 OR1S1Q8NH92 325 aa13.06□□□□□ -0.32
NUP54-214ENST00000514307 GPR146Q96CH1 333 aa13.06□□□□□ -0.32
NUP54-214ENST00000514307 C5orf30Q96GV9 206 aa13.06□□□□□ -0.32
NUP54-214ENST00000514307 PCGF1Q9BSM1 259 aa13.06□□□□□ -0.32
NUP54-214ENST00000514307 UNKLQ9H9P5 680 aaKnown RBP13.06□□□□□ -0.32
NUP54-214ENST00000514307 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.06□□□□□ -0.32
NUP54-214ENST00000514307 HSPB11Q9Y547 144 aa13.06□□□□□ -0.32
NUP54-214ENST00000514307 IGHV2-70DA0A0C4DH43 119 aa13.05□□□□□ -0.32
NUP54-214ENST00000514307 L7N2F9 121 aa13.05□□□□□ -0.32
NUP54-214ENST00000514307 TXNL1O43396 289 aa13.05□□□□□ -0.32
NUP54-214ENST00000514307 IGLV1-47P01700 117 aa13.05□□□□□ -0.32
NUP54-214ENST00000514307 CT45A6P0DMU7 189 aa13.05□□□□□ -0.32
NUP54-214ENST00000514307 CT45A5P0DMU8 189 aa13.05□□□□□ -0.32
NUP54-214ENST00000514307 CT45A7P0DMV0 189 aa13.05□□□□□ -0.32
NUP54-214ENST00000514307 NQO2P16083 231 aa13.05□□□□□ -0.32
NUP54-214ENST00000514307 USF1P22415 310 aaPredicted RBP13.05□□□□□ -0.32
NUP54-214ENST00000514307 NKX2-1P43699 371 aaPredicted RBP13.05□□□□□ -0.32
NUP54-214ENST00000514307 DEFB113Q30KQ7 82 aa13.05□□□□□ -0.32
NUP54-214ENST00000514307 UTF1Q5T230 341 aa13.05□□□□□ -0.32
NUP54-214ENST00000514307 TGIF2LXQ8IUE1 241 aa13.05□□□□□ -0.32
NUP54-214ENST00000514307 PNKDQ8N490 385 aa13.05□□□□□ -0.32
NUP54-214ENST00000514307 Q8N7P7 452 aa13.05□□□□□ -0.32
NUP54-214ENST00000514307 DDB2Q92466 427 aa13.05□□□□□ -0.32
NUP54-214ENST00000514307 ST6GALNAC6Q969X2 333 aa13.05□□□□□ -0.32
NUP54-214ENST00000514307 MBD6Q96DN6 1003 aa13.05□□□□□ -0.32
NUP54-214ENST00000514307 RNF126Q9BV68 326 aa13.05□□□□□ -0.32
NUP54-214ENST00000514307 MFFQ9GZY8 342 aa13.05□□□□□ -0.32
NUP54-214ENST00000514307 COA4Q9NYJ1 87 aa13.05□□□□□ -0.32
NUP54-214ENST00000514307 TRAV14DV4A0A0A6YYC5 116 aa13.04□□□□□ -0.32
NUP54-214ENST00000514307 FAM90A9PA6NNJ1 464 aa13.04□□□□□ -0.32
NUP54-214ENST00000514307 LEUTXA8MZ59 168 aa13.04□□□□□ -0.32
NUP54-214ENST00000514307 E5RGE8 158 aa13.04□□□□□ -0.32
NUP54-214ENST00000514307 G3V3Q6 166 aa13.04□□□□□ -0.32
NUP54-214ENST00000514307 BUB1B-PAK6H3BSN5 160 aa13.04□□□□□ -0.32
NUP54-214ENST00000514307 RAMP3O60896 148 aa13.04□□□□□ -0.32
NUP54-214ENST00000514307 OR2F2O95006 317 aa13.04□□□□□ -0.32
NUP54-214ENST00000514307 IGKV1-39P01597 117 aa13.04□□□□□ -0.32
NUP54-214ENST00000514307 IGKV1D-39P04432 117 aa13.04□□□□□ -0.32
NUP54-214ENST00000514307 LYL1P12980 280 aa13.04□□□□□ -0.32
NUP54-214ENST00000514307 MMP9P14780 707 aa13.04□□□□□ -0.32
NUP54-214ENST00000514307 HTR1DP28221 377 aa13.04□□□□□ -0.32
NUP54-214ENST00000514307 DVL1P1P54792 670 aaPredicted RBP13.04□□□□□ -0.32
NUP54-214ENST00000514307 S100A10P60903 97 aa13.04□□□□□ -0.32
NUP54-214ENST00000514307 ID3Q02535 119 aa13.04□□□□□ -0.32
NUP54-214ENST00000514307 OR2F1Q13607 317 aa13.04□□□□□ -0.32
NUP54-214ENST00000514307 RAB32Q13637 225 aa13.04□□□□□ -0.32
NUP54-214ENST00000514307 HLA-DRB5Q30154 266 aa13.04□□□□□ -0.32
NUP54-214ENST00000514307 OR2B11Q5JQS5 317 aa13.04□□□□□ -0.32
NUP54-214ENST00000514307 ACOT7LQ6ZUV0 252 aa13.04□□□□□ -0.32
NUP54-214ENST00000514307 ZNF383Q8NA42 475 aa13.04□□□□□ -0.32
NUP54-214ENST00000514307 NRGNQ92686 78 aa13.04□□□□□ -0.32
NUP54-214ENST00000514307 LHX4Q969G2 390 aa13.04□□□□□ -0.32
NUP54-214ENST00000514307 R3HDM4Q96D70 268 aa13.04□□□□□ -0.32
NUP54-214ENST00000514307 SLC35D1Q9NTN3 355 aa13.04□□□□□ -0.32
NUP54-214ENST00000514307 NSG2Q9Y328 171 aa13.04□□□□□ -0.32
NUP54-214ENST00000514307 INSIG2Q9Y5U4 225 aa13.04□□□□□ -0.32
NUP54-214ENST00000514307 KIAA2026Q5HYC2 2103 aa13.04□□□□□ -0.32
NUP54-214ENST00000514307 FAM90A26D6RGX4 464 aa13.03□□□□□ -0.32
NUP54-214ENST00000514307 WRBO00258 174 aa13.03□□□□□ -0.32
NUP54-214ENST00000514307 ARPC5O15511 151 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms