RNA–Protein interactions for RNA: ENST00000511439.5

TOPBP1-208, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 5

Gene TOPBP1, Length 1,142 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-208ENST00000511439 OR9G1Q8NH87 305 aa2.23□□□□□ -2.05
TOPBP1-208ENST00000511439 LYPD6BQ8NI32 183 aa2.23□□□□□ -2.05
TOPBP1-208ENST00000511439 SLC25A40Q8TBP6 338 aa2.23□□□□□ -2.05
TOPBP1-208ENST00000511439 CCDC124Q96CT7 223 aaKnown RBP2.23□□□□□ -2.05
TOPBP1-208ENST00000511439 FCRL1Q96LA6 429 aa2.23□□□□□ -2.05
TOPBP1-208ENST00000511439 ZNF681Q96N22 645 aa2.23□□□□□ -2.05
TOPBP1-208ENST00000511439 OR8B4Q96RC9 309 aa2.23□□□□□ -2.05
TOPBP1-208ENST00000511439 ECSITQ9BQ95 431 aa2.23□□□□□ -2.05
TOPBP1-208ENST00000511439 NAT9Q9BTE0 207 aa2.23□□□□□ -2.05
TOPBP1-208ENST00000511439 TMEM59Q9BXS4 323 aa2.23□□□□□ -2.05
TOPBP1-208ENST00000511439 ACTR3CQ9C0K3 210 aaPredicted RBP2.23□□□□□ -2.05
TOPBP1-208ENST00000511439 OR2J1Q9GZK6 312 aa2.23□□□□□ -2.05
TOPBP1-208ENST00000511439 ALX4Q9H161 411 aaPredicted RBP2.23□□□□□ -2.05
TOPBP1-208ENST00000511439 RNF167Q9H6Y7 350 aa2.23□□□□□ -2.05
TOPBP1-208ENST00000511439 FGF20Q9NP95 211 aaPredicted RBP2.23□□□□□ -2.05
TOPBP1-208ENST00000511439 CCDC59Q9P031 241 aaKnown RBP2.23□□□□□ -2.05
TOPBP1-208ENST00000511439 STX18Q9P2W9 335 aaKnown RBP2.23□□□□□ -2.05
TOPBP1-208ENST00000511439 LGALS13Q9UHV8 139 aa2.23□□□□□ -2.05
TOPBP1-208ENST00000511439 RWDD2AQ9UIY3 292 aa2.23□□□□□ -2.05
TOPBP1-208ENST00000511439 ZNF225Q9UK10 706 aa2.23□□□□□ -2.05
TOPBP1-208ENST00000511439 CES1P1Q9UKY3 287 aa2.23□□□□□ -2.05
TOPBP1-208ENST00000511439 TP53TG1Q9Y2A0 90 aa2.23□□□□□ -2.05
TOPBP1-208ENST00000511439 TNXBP22105 4242 aa2.22□□□□□ -2.05
TOPBP1-208ENST00000511439 TRAV38-1A0A0B4J264 116 aa2.22□□□□□ -2.05
TOPBP1-208ENST00000511439 A0A0B4J2A0 478 aa2.22□□□□□ -2.05
TOPBP1-208ENST00000511439 LYRM9A8MSI8 78 aa2.22□□□□□ -2.05
TOPBP1-208ENST00000511439 APOC4-APOC2K7ER74 178 aa2.22□□□□□ -2.05
TOPBP1-208ENST00000511439 CA11O75493 328 aa2.22□□□□□ -2.05
TOPBP1-208ENST00000511439 IFNA21P01568 189 aa2.22□□□□□ -2.05
TOPBP1-208ENST00000511439 IFNA17P01571 189 aa2.22□□□□□ -2.05
TOPBP1-208ENST00000511439 IGLV1-51P01701 117 aa2.22□□□□□ -2.05
TOPBP1-208ENST00000511439 APOC2P02655 101 aa2.22□□□□□ -2.05
TOPBP1-208ENST00000511439 PSG2P11465 335 aa2.22□□□□□ -2.05
TOPBP1-208ENST00000511439 PMCHP20382 165 aa2.22□□□□□ -2.05
TOPBP1-208ENST00000511439 FMO3P31513 532 aa2.22□□□□□ -2.05
TOPBP1-208ENST00000511439 BTCP35070 178 aa2.22□□□□□ -2.05
TOPBP1-208ENST00000511439 APLNRP35414 380 aa2.22□□□□□ -2.05
TOPBP1-208ENST00000511439 RPS10P46783 165 aaKnown RBP2.22□□□□□ -2.05
TOPBP1-208ENST00000511439 ECH1Q13011 328 aa2.22□□□□□ -2.05
TOPBP1-208ENST00000511439 UNC119Q13432 240 aa2.22□□□□□ -2.05
TOPBP1-208ENST00000511439 OR8B8Q15620 311 aa2.22□□□□□ -2.05
TOPBP1-208ENST00000511439 UAP1Q16222 522 aaPredicted RBP2.22□□□□□ -2.05
TOPBP1-208ENST00000511439 PSG3Q16557 428 aa2.22□□□□□ -2.05
TOPBP1-208ENST00000511439 HCP5Q6MZN7 132 aa2.22□□□□□ -2.05
TOPBP1-208ENST00000511439 C1orf94Q6P1W5 598 aa2.22□□□□□ -2.05
TOPBP1-208ENST00000511439 TMPRSS11AQ6ZMR5 421 aa2.22□□□□□ -2.05
TOPBP1-208ENST00000511439 PAGE2Q7Z2X7 111 aa2.22□□□□□ -2.05
TOPBP1-208ENST00000511439 FAM122BQ7Z309 247 aa2.22□□□□□ -2.05
TOPBP1-208ENST00000511439 DPPA2Q7Z7J5 298 aa2.22□□□□□ -2.05
TOPBP1-208ENST00000511439 SLC30A8Q8IWU4 369 aa2.22□□□□□ -2.05
TOPBP1-208ENST00000511439 C15orf53Q8NAA6 179 aa2.22□□□□□ -2.05
TOPBP1-208ENST00000511439 C19orf18Q8NEA5 215 aa2.22□□□□□ -2.05
TOPBP1-208ENST00000511439 OR2G2Q8NGZ5 317 aa2.22□□□□□ -2.05
TOPBP1-208ENST00000511439 DDIT4LQ96D03 193 aa2.22□□□□□ -2.05
TOPBP1-208ENST00000511439 SERPINB12Q96P63 405 aa2.22□□□□□ -2.05
TOPBP1-208ENST00000511439 MS4A4EQ96PG1 132 aa2.22□□□□□ -2.05
TOPBP1-208ENST00000511439 SDHCQ99643 169 aaPredicted RBP2.22□□□□□ -2.05
TOPBP1-208ENST00000511439 SH3GL3Q99963 347 aa2.22□□□□□ -2.05
TOPBP1-208ENST00000511439 PAIP2Q9BPZ3 127 aaKnown RBP2.22□□□□□ -2.05
TOPBP1-208ENST00000511439 OSBPL10Q9BXB5 764 aa2.22□□□□□ -2.05
TOPBP1-208ENST00000511439 NDEL1Q9GZM8 345 aa2.22□□□□□ -2.05
TOPBP1-208ENST00000511439 ZNF331Q9NQX6 463 aaPredicted RBP2.22□□□□□ -2.05
TOPBP1-208ENST00000511439 FBXO6Q9NRD1 293 aaPredicted RBP2.22□□□□□ -2.05
TOPBP1-208ENST00000511439 TAS2R13Q9NYV9 303 aa2.22□□□□□ -2.05
TOPBP1-208ENST00000511439 SHPKQ9UHJ6 478 aa2.22□□□□□ -2.05
TOPBP1-208ENST00000511439 NUFIP1Q9UHK0 495 aaKnown RBP2.22□□□□□ -2.05
TOPBP1-208ENST00000511439 POFUT2Q9Y2G5 429 aa2.22□□□□□ -2.05
TOPBP1-208ENST00000511439 NACAE9PAV3 2078 aa2.22□□□□□ -2.05
TOPBP1-208ENST00000511439 TNCP24821 2201 aa2.22□□□□□ -2.05
TOPBP1-208ENST00000511439 LRP1Q07954 4544 aaKnown RBP2.22□□□□□ -2.05
TOPBP1-208ENST00000511439 M0QZK8 103 aa2.21□□□□□ -2.06
TOPBP1-208ENST00000511439 PPP1R2P9O14990 202 aa2.21□□□□□ -2.06
TOPBP1-208ENST00000511439 MRPS12O15235 138 aaKnown RBP2.21□□□□□ -2.06
TOPBP1-208ENST00000511439 SIVA1O15304 175 aa2.21□□□□□ -2.06
TOPBP1-208ENST00000511439 PSMG1O95456 288 aa2.21□□□□□ -2.06
TOPBP1-208ENST00000511439 MOSP00540 346 aa2.21□□□□□ -2.06
TOPBP1-208ENST00000511439 FGGP02679 453 aa2.21□□□□□ -2.06
TOPBP1-208ENST00000511439 KLK1P06870 262 aa2.21□□□□□ -2.06
TOPBP1-208ENST00000511439 GIPP09681 153 aaPredicted RBP2.21□□□□□ -2.06
TOPBP1-208ENST00000511439 CRISP2P16562 243 aa2.21□□□□□ -2.06
TOPBP1-208ENST00000511439 ZNF3P17036 446 aa2.21□□□□□ -2.06
TOPBP1-208ENST00000511439 MPIP34949 423 aa2.21□□□□□ -2.06
TOPBP1-208ENST00000511439 HTR2BP41595 481 aa2.21□□□□□ -2.06
TOPBP1-208ENST00000511439 OR12D2P58182 307 aa2.21□□□□□ -2.06
TOPBP1-208ENST00000511439 TAS2R39P59534 338 aa2.21□□□□□ -2.06
TOPBP1-208ENST00000511439 PPP1CBP62140 327 aa2.21□□□□□ -2.06
TOPBP1-208ENST00000511439 TRAM2Q15035 370 aa2.21□□□□□ -2.06
TOPBP1-208ENST00000511439 TSNQ15631 228 aaKnown RBP2.21□□□□□ -2.06
TOPBP1-208ENST00000511439 NDUFAF6Q330K2 333 aa2.21□□□□□ -2.06
TOPBP1-208ENST00000511439 COA6Q5JTJ3 125 aaKnown RBP2.21□□□□□ -2.06
TOPBP1-208ENST00000511439 C6orf183Q5T699 404 aa2.21□□□□□ -2.06
TOPBP1-208ENST00000511439 LCN12Q6JVE5 192 aa2.21□□□□□ -2.06
TOPBP1-208ENST00000511439 Q6P435 159 aa2.21□□□□□ -2.06
TOPBP1-208ENST00000511439 Q6ZR03 302 aa2.21□□□□□ -2.06
TOPBP1-208ENST00000511439 ZNF767PQ75MW2 155 aa2.21□□□□□ -2.06
TOPBP1-208ENST00000511439 TRMT10CQ7L0Y3 403 aaKnown RBP2.21□□□□□ -2.06
TOPBP1-208ENST00000511439 GRINAQ7Z429 371 aa2.21□□□□□ -2.06
TOPBP1-208ENST00000511439 PDIK1LQ8N165 341 aa2.21□□□□□ -2.06
TOPBP1-208ENST00000511439 DYNAPQ8N1N2 210 aa2.21□□□□□ -2.06
TOPBP1-208ENST00000511439 Q8N9L7 120 aa2.21□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 152.3 ms