RNA–Protein interactions for RNA: ENST00000510569.5

NUP54-209, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 494 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-209ENST00000510569 LINC01619G3V211 115 aa2.66□□□□□ -1.98
NUP54-209ENST00000510569 K7ENP7 123 aa2.66□□□□□ -1.98
NUP54-209ENST00000510569 FAAHO00519 579 aa2.66□□□□□ -1.98
NUP54-209ENST00000510569 HMGB3O15347 200 aaKnown RBP2.66□□□□□ -1.98
NUP54-209ENST00000510569 TRAF3IP2O43734 574 aaPredicted RBP2.66□□□□□ -1.98
NUP54-209ENST00000510569 MFSD11O43934 449 aa2.66□□□□□ -1.98
NUP54-209ENST00000510569 TNFSF15O95150 251 aa2.66□□□□□ -1.98
NUP54-209ENST00000510569 GADD45GO95257 159 aa2.66□□□□□ -1.98
NUP54-209ENST00000510569 FAM107AO95990 144 aa2.66□□□□□ -1.98
NUP54-209ENST00000510569 PTHP01270 115 aa2.66□□□□□ -1.98
NUP54-209ENST00000510569 P01737 135 aa2.66□□□□□ -1.98
NUP54-209ENST00000510569 IL3P08700 152 aa2.66□□□□□ -1.98
NUP54-209ENST00000510569 OR56A5P0C7T3 313 aa2.66□□□□□ -1.98
NUP54-209ENST00000510569 GKN3PP0CG01 181 aa2.66□□□□□ -1.98
NUP54-209ENST00000510569 ESDP10768 282 aa2.66□□□□□ -1.98
NUP54-209ENST00000510569 GABRA1P14867 456 aa2.66□□□□□ -1.98
NUP54-209ENST00000510569 RCC1P18754 421 aaPredicted RBP2.66□□□□□ -1.98
NUP54-209ENST00000510569 MIPP30301 263 aa2.66□□□□□ -1.98
NUP54-209ENST00000510569 PHBP35232 272 aa2.66□□□□□ -1.98
NUP54-209ENST00000510569 BIDP55957 195 aa2.66□□□□□ -1.98
NUP54-209ENST00000510569 MTPNP58546 118 aa2.66□□□□□ -1.98
NUP54-209ENST00000510569 CKS1BP61024 79 aa2.66□□□□□ -1.98
NUP54-209ENST00000510569 SLC35A2P78381 396 aa2.66□□□□□ -1.98
NUP54-209ENST00000510569 RELAQ04206 551 aa2.66□□□□□ -1.98
NUP54-209ENST00000510569 QPRTQ15274 297 aa2.66□□□□□ -1.98
NUP54-209ENST00000510569 CEACAM16Q2WEN9 425 aa2.66□□□□□ -1.98
NUP54-209ENST00000510569 NSUN5P1Q3KNT7 163 aa2.66□□□□□ -1.98
NUP54-209ENST00000510569 C1orf194Q5T5A4 169 aa2.66□□□□□ -1.98
NUP54-209ENST00000510569 FA2HQ7L5A8 372 aa2.66□□□□□ -1.98
NUP54-209ENST00000510569 DOLPP1Q86YN1 238 aa2.66□□□□□ -1.98
NUP54-209ENST00000510569 FTMTQ8N4E7 242 aa2.66□□□□□ -1.98
NUP54-209ENST00000510569 CBR4Q8N4T8 237 aa2.66□□□□□ -1.98
NUP54-209ENST00000510569 ZNF283Q8N7M2 679 aa2.66□□□□□ -1.98
NUP54-209ENST00000510569 SLC35G3Q8N808 338 aa2.66□□□□□ -1.98
NUP54-209ENST00000510569 OR4D11Q8NGI4 311 aa2.66□□□□□ -1.98
NUP54-209ENST00000510569 MFSD8Q8NHS3 518 aa2.66□□□□□ -1.98
NUP54-209ENST00000510569 OR51E1Q8TCB6 317 aa2.66□□□□□ -1.98
NUP54-209ENST00000510569 BLNKQ8WV28 456 aa2.66□□□□□ -1.98
NUP54-209ENST00000510569 CYGBQ8WWM9 190 aa2.66□□□□□ -1.98
NUP54-209ENST00000510569 FGF14Q92915 247 aa2.66□□□□□ -1.98
NUP54-209ENST00000510569 TMEM54Q969K7 222 aa2.66□□□□□ -1.98
NUP54-209ENST00000510569 TMEM230Q96A57 120 aa2.66□□□□□ -1.98
NUP54-209ENST00000510569 C14orf144Q96I85 54 aa2.66□□□□□ -1.98
NUP54-209ENST00000510569 BTN2A3PQ96KV6 586 aa2.66□□□□□ -1.98
NUP54-209ENST00000510569 FAAP24Q9BTP7 215 aa2.66□□□□□ -1.98
NUP54-209ENST00000510569 EMC6Q9BV81 110 aa2.66□□□□□ -1.98
NUP54-209ENST00000510569 SUCNR1Q9BXA5 334 aa2.66□□□□□ -1.98
NUP54-209ENST00000510569 SLC17A9Q9BYT1 436 aa2.66□□□□□ -1.98
NUP54-209ENST00000510569 MAP1LC3BQ9GZQ8 125 aa2.66□□□□□ -1.98
NUP54-209ENST00000510569 CHST5Q9GZS9 411 aa2.66□□□□□ -1.98
NUP54-209ENST00000510569 POMKQ9H5K3 350 aa2.66□□□□□ -1.98
NUP54-209ENST00000510569 DMAC2Q9NW81 257 aa2.66□□□□□ -1.98
NUP54-209ENST00000510569 KCNIP1Q9NZI2 227 aa2.66□□□□□ -1.98
NUP54-209ENST00000510569 DNAJC27Q9NZQ0 273 aa2.66□□□□□ -1.98
NUP54-209ENST00000510569 OR12D3Q9UGF7 316 aa2.66□□□□□ -1.98
NUP54-209ENST00000510569 ZNF257Q9Y2Q1 563 aa2.66□□□□□ -1.98
NUP54-209ENST00000510569 KIF26AQ9ULI4 1882 aaPredicted RBP2.66□□□□□ -1.98
NUP54-209ENST00000510569 LCTP09848 1927 aa2.66□□□□□ -1.98
NUP54-209ENST00000510569 BORCS7-ASMTA0A0B4J1R7 106 aa2.65□□□□□ -1.99
NUP54-209ENST00000510569 IGHV7-81A0A0B4J1V7 117 aa2.65□□□□□ -1.99
NUP54-209ENST00000510569 TEX50A0A1B0GTY4 177 aa2.65□□□□□ -1.99
NUP54-209ENST00000510569 A0A1W2PRE2 83 aa2.65□□□□□ -1.99
NUP54-209ENST00000510569 TMEM150BA6NC51 233 aa2.65□□□□□ -1.99
NUP54-209ENST00000510569 CCDC160A6NGH7 325 aa2.65□□□□□ -1.99
NUP54-209ENST00000510569 OR5H14A6NHG9 310 aa2.65□□□□□ -1.99
NUP54-209ENST00000510569 F6UB75 175 aa2.65□□□□□ -1.99
NUP54-209ENST00000510569 GCM2O75603 506 aaPredicted RBP2.65□□□□□ -1.99
NUP54-209ENST00000510569 POP7O75817 140 aaKnown RBP2.65□□□□□ -1.99
NUP54-209ENST00000510569 MOSP00540 346 aa2.65□□□□□ -1.99
NUP54-209ENST00000510569 IGF2P01344 180 aa2.65□□□□□ -1.99
NUP54-209ENST00000510569 APOA2P02652 100 aa2.65□□□□□ -1.99
NUP54-209ENST00000510569 TTRP02766 147 aa2.65□□□□□ -1.99
NUP54-209ENST00000510569 CSF3P09919 207 aa2.65□□□□□ -1.99
NUP54-209ENST00000510569 TSPAN19P0C672 248 aa2.65□□□□□ -1.99
NUP54-209ENST00000510569 METTL15P1P0C7V9 234 aa2.65□□□□□ -1.99
NUP54-209ENST00000510569 ZNF823P16415 610 aa2.65□□□□□ -1.99
NUP54-209ENST00000510569 TCN2P20062 427 aa2.65□□□□□ -1.99
NUP54-209ENST00000510569 MYL9P24844 172 aa2.65□□□□□ -1.99
NUP54-209ENST00000510569 S100A7P31151 101 aa2.65□□□□□ -1.99
NUP54-209ENST00000510569 MYCNOSP40205 109 aa2.65□□□□□ -1.99
NUP54-209ENST00000510569 CTRLP40313 264 aa2.65□□□□□ -1.99
NUP54-209ENST00000510569 PPICP45877 212 aa2.65□□□□□ -1.99
NUP54-209ENST00000510569 GPR6P46095 362 aaPredicted RBP2.65□□□□□ -1.99
NUP54-209ENST00000510569 RBP2P50120 134 aa2.65□□□□□ -1.99
NUP54-209ENST00000510569 KLF3P57682 345 aaPredicted RBP2.65□□□□□ -1.99
NUP54-209ENST00000510569 TPI1P60174 286 aa2.65□□□□□ -1.99
NUP54-209ENST00000510569 GNGT1P63211 74 aa2.65□□□□□ -1.99
NUP54-209ENST00000510569 CDK5Q00535 292 aa2.65□□□□□ -1.99
NUP54-209ENST00000510569 PAGE3Q5JUK9 113 aa2.65□□□□□ -1.99
NUP54-209ENST00000510569 ZNF684Q5T5D7 378 aa2.65□□□□□ -1.99
NUP54-209ENST00000510569 AVPI1Q5T686 147 aa2.65□□□□□ -1.99
NUP54-209ENST00000510569 HENMT1Q5T8I9 393 aaKnown RBP2.65□□□□□ -1.99
NUP54-209ENST00000510569 ZFAND6Q6FIF0 208 aa2.65□□□□□ -1.99
NUP54-209ENST00000510569 NANOGP8Q6NSW7 305 aa2.65□□□□□ -1.99
NUP54-209ENST00000510569 XKRXQ6PP77 449 aa2.65□□□□□ -1.99
NUP54-209ENST00000510569 ZNF571Q7Z3V5 609 aaPredicted RBP2.65□□□□□ -1.99
NUP54-209ENST00000510569 OOSP2Q86WS3 158 aa2.65□□□□□ -1.99
NUP54-209ENST00000510569 CALHM3Q86XJ0 350 aa2.65□□□□□ -1.99
NUP54-209ENST00000510569 ZNF567Q8N184 647 aa2.65□□□□□ -1.99
NUP54-209ENST00000510569 OSR2Q8N2R0 312 aa2.65□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms