RNA–Protein interactions for RNA: ENST00000509876.5

PHF3-210, Transcript of PHD finger protein 3, humanhuman

TSL 1 (best)

Gene PHF3, Length 7,124 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-210ENST00000509876 ORM2P19652 201 aa4.29□□□□□ -1.72
PHF3-210ENST00000509876 MAS1LP35410 378 aa4.29□□□□□ -1.72
PHF3-210ENST00000509876 RAG2P55895 527 aa4.29□□□□□ -1.72
PHF3-210ENST00000509876 UBE2G2P60604 165 aa4.29□□□□□ -1.72
PHF3-210ENST00000509876 UBE2KP61086 200 aa4.29□□□□□ -1.72
PHF3-210ENST00000509876 ZNF362Q5T0B9 420 aaPredicted RBP4.29□□□□□ -1.72
PHF3-210ENST00000509876 TMUB2Q71RG4 321 aa4.29□□□□□ -1.72
PHF3-210ENST00000509876 ZNF767PQ75MW2 155 aa4.29□□□□□ -1.72
PHF3-210ENST00000509876 C16orf82Q7Z2V1 217 aa4.29□□□□□ -1.72
PHF3-210ENST00000509876 SLC51BQ86UW2 128 aa4.29□□□□□ -1.72
PHF3-210ENST00000509876 SLC24A4Q8NFF2 622 aa4.29□□□□□ -1.72
PHF3-210ENST00000509876 U3KQ87 197 aa4.29□□□□□ -1.72
PHF3-210ENST00000509876 IGHV2-26A0A0B4J1V2 119 aa4.28□□□□□ -1.72
PHF3-210ENST00000509876 HLA-GP17693 338 aa4.28□□□□□ -1.72
PHF3-210ENST00000509876 ARL3P36405 182 aa4.28□□□□□ -1.72
PHF3-210ENST00000509876 TMEM200BQ69YZ2 307 aa4.28□□□□□ -1.72
PHF3-210ENST00000509876 LFNGQ8NES3 379 aa4.28□□□□□ -1.72
PHF3-210ENST00000509876 MALSU1Q96EH3 234 aa4.28□□□□□ -1.72
PHF3-210ENST00000509876 RBM14Q96PK6 669 aaKnown RBP4.28□□□□□ -1.72
PHF3-210ENST00000509876 RANGRFQ9HD47 186 aaPredicted RBP4.28□□□□□ -1.72
PHF3-210ENST00000509876 BMPR1BO00238 502 aa4.28□□□□□ -1.72
PHF3-210ENST00000509876 TCF21O43680 179 aa4.28□□□□□ -1.72
PHF3-210ENST00000509876 CDS2O95674 445 aa4.28□□□□□ -1.72
PHF3-210ENST00000509876 IGHV1-8P0DP01 117 aa4.28□□□□□ -1.72
PHF3-210ENST00000509876 MGST1P10620 155 aaKnown RBP4.28□□□□□ -1.72
PHF3-210ENST00000509876 RPL39P5Q59GN2 51 aa4.28□□□□□ -1.72
PHF3-210ENST00000509876 C1QL2Q7Z5L3 287 aa4.28□□□□□ -1.72
PHF3-210ENST00000509876 C15orf54Q8N8G6 183 aa4.28□□□□□ -1.72
PHF3-210ENST00000509876 PLPPR1Q8TBJ4 325 aa4.28□□□□□ -1.72
PHF3-210ENST00000509876 MRPL20Q9BYC9 149 aaKnown RBP4.28□□□□□ -1.72
PHF3-210ENST00000509876 MDC1Q14676 2089 aaKnown RBP4.28□□□□□ -1.72
PHF3-210ENST00000509876 HOXA4Q00056 320 aaPredicted RBP4.28□□□□□ -1.72
PHF3-210ENST00000509876 OPCMLQ14982 345 aa4.28□□□□□ -1.72
PHF3-210ENST00000509876 CR1LQ2VPA4 569 aa4.28□□□□□ -1.72
PHF3-210ENST00000509876 SLC25A22Q9H936 323 aa4.28□□□□□ -1.72
PHF3-210ENST00000509876 A0A1W2PRX2 142 aa4.28□□□□□ -1.72
PHF3-210ENST00000509876 MFNGO00587 321 aa4.28□□□□□ -1.72
PHF3-210ENST00000509876 AGPAT2O15120 278 aa4.28□□□□□ -1.72
PHF3-210ENST00000509876 H2AFB1P0C5Y9 115 aa4.28□□□□□ -1.72
PHF3-210ENST00000509876 AKR1C3P42330 323 aa4.28□□□□□ -1.72
PHF3-210ENST00000509876 ZNF146Q15072 292 aa4.28□□□□□ -1.72
PHF3-210ENST00000509876 C11orf91Q3C1V1 193 aa4.28□□□□□ -1.72
PHF3-210ENST00000509876 FFAR4Q5NUL3 377 aa4.28□□□□□ -1.72
PHF3-210ENST00000509876 KCNIP4Q6PIL6 250 aa4.28□□□□□ -1.72
PHF3-210ENST00000509876 RGP1Q92546 391 aaPredicted RBP4.28□□□□□ -1.72
PHF3-210ENST00000509876 RHOVQ96L33 236 aa4.28□□□□□ -1.72
PHF3-210ENST00000509876 HRH4Q9H3N8 390 aa4.28□□□□□ -1.72
PHF3-210ENST00000509876 CNTRLQ7Z7A1 2325 aa4.28□□□□□ -1.72
PHF3-210ENST00000509876 IGHV2-70DA0A0C4DH43 119 aa4.28□□□□□ -1.72
PHF3-210ENST00000509876 J3QRE1 110 aa4.28□□□□□ -1.72
PHF3-210ENST00000509876 ADAM10O14672 748 aa4.28□□□□□ -1.72
PHF3-210ENST00000509876 LY6HO94772 140 aa4.28□□□□□ -1.72
PHF3-210ENST00000509876 S100A6P06703 90 aa4.28□□□□□ -1.72
PHF3-210ENST00000509876 TAGLN2P37802 199 aaKnown RBP4.28□□□□□ -1.72
PHF3-210ENST00000509876 P2RY1P47900 373 aa4.28□□□□□ -1.72
PHF3-210ENST00000509876 ZNF324BQ6AW86 544 aaPredicted RBP4.28□□□□□ -1.72
PHF3-210ENST00000509876 SFT2D1Q8WV19 159 aa4.28□□□□□ -1.72
PHF3-210ENST00000509876 PPP1R1CQ8WVI7 109 aa4.28□□□□□ -1.72
PHF3-210ENST00000509876 HIGD1AQ9Y241 93 aa4.28□□□□□ -1.72
PHF3-210ENST00000509876 NINQ8N4C6 2090 aa4.28□□□□□ -1.73
PHF3-210ENST00000509876 CST7O76096 145 aa4.28□□□□□ -1.73
PHF3-210ENST00000509876 CFDP00746 253 aaPredicted RBP4.28□□□□□ -1.73
PHF3-210ENST00000509876 SPP1P10451 314 aa4.28□□□□□ -1.73
PHF3-210ENST00000509876 EGR1P18146 543 aa4.28□□□□□ -1.73
PHF3-210ENST00000509876 UCP3P55916 312 aa4.28□□□□□ -1.73
PHF3-210ENST00000509876 KLF9Q13886 244 aaPredicted RBP4.28□□□□□ -1.73
PHF3-210ENST00000509876 NSUN5P1Q3KNT7 163 aa4.28□□□□□ -1.73
PHF3-210ENST00000509876 EBLN2Q6P2I7 272 aa4.28□□□□□ -1.73
PHF3-210ENST00000509876 H1FOOQ8IZA3 346 aaPredicted RBP4.28□□□□□ -1.73
PHF3-210ENST00000509876 STPG3Q8N7X2 389 aa4.28□□□□□ -1.73
PHF3-210ENST00000509876 C8orf46Q8TAG6 207 aa4.28□□□□□ -1.73
PHF3-210ENST00000509876 CXorf58Q96LI9 332 aa4.28□□□□□ -1.73
PHF3-210ENST00000509876 TMEM222Q9H0R3 208 aa4.28□□□□□ -1.73
PHF3-210ENST00000509876 ZNF319Q9P2F9 582 aa4.28□□□□□ -1.73
PHF3-210ENST00000509876 MDFIC2A0A1B0GVS7 189 aa4.27□□□□□ -1.73
PHF3-210ENST00000509876 AP4M1O00189 453 aa4.27□□□□□ -1.73
PHF3-210ENST00000509876 MLNRO43193 412 aa4.27□□□□□ -1.73
PHF3-210ENST00000509876 FLI1Q01543 452 aaPredicted RBP4.27□□□□□ -1.73
PHF3-210ENST00000509876 MIDNQ504T8 468 aa4.27□□□□□ -1.73
PHF3-210ENST00000509876 TPTE2P1Q5T6R2 138 aa4.27□□□□□ -1.73
PHF3-210ENST00000509876 C10orf113Q5VZT2 155 aa4.27□□□□□ -1.73
PHF3-210ENST00000509876 WFDC3Q8IUB2 231 aa4.27□□□□□ -1.73
PHF3-210ENST00000509876 LRRC75A-AS1Q8N1F1 130 aa4.27□□□□□ -1.73
PHF3-210ENST00000509876 IL22RA2Q969J5 263 aa4.27□□□□□ -1.73
PHF3-210ENST00000509876 DUX5Q96PT3 197 aa4.27□□□□□ -1.73
PHF3-210ENST00000509876 MIXL1Q9H2W2 232 aa4.27□□□□□ -1.73
PHF3-210ENST00000509876 RNF114Q9Y508 228 aa4.27□□□□□ -1.73
PHF3-210ENST00000509876 RAB5CP51148 216 aa4.27□□□□□ -1.73
PHF3-210ENST00000509876 CNN1P51911 297 aaKnown RBP4.27□□□□□ -1.73
PHF3-210ENST00000509876 ZP1P60852 638 aa4.27□□□□□ -1.73
PHF3-210ENST00000509876 HSPE1P61604 102 aaKnown RBP4.27□□□□□ -1.73
PHF3-210ENST00000509876 NHLRC3Q5JS37 347 aa4.27□□□□□ -1.73
PHF3-210ENST00000509876 OR8I2Q8N0Y5 310 aa4.27□□□□□ -1.73
PHF3-210ENST00000509876 CD177Q8N6Q3 437 aa4.27□□□□□ -1.73
PHF3-210ENST00000509876 FBXL15Q9H469 300 aa4.27□□□□□ -1.73
PHF3-210ENST00000509876 C19orf12Q9NSK7 152 aa4.27□□□□□ -1.73
PHF3-210ENST00000509876 DOK5Q9P104 306 aa4.27□□□□□ -1.73
PHF3-210ENST00000509876 IL36RNQ9UBH0 155 aa4.27□□□□□ -1.73
PHF3-210ENST00000509876 WSB1Q9Y6I7 421 aa4.27□□□□□ -1.73
PHF3-210ENST00000509876 IGHV3-21A0A0B4J1V1 117 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms