RNA–Protein interactions for RNA: ENST00000509637.6

RAB40C-202, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 565 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-202ENST00000509637 FAM110AQ9BQ89 295 aa12.07□□□□□ -0.48
RAB40C-202ENST00000509637 TMED9Q9BVK6 235 aa12.07□□□□□ -0.48
RAB40C-202ENST00000509637 ELOVL1Q9BW60 279 aa12.07□□□□□ -0.48
RAB40C-202ENST00000509637 CHMP1AQ9HD42 196 aaPredicted RBP12.07□□□□□ -0.48
RAB40C-202ENST00000509637 ZNF355PQ9NSJ1 428 aa12.07□□□□□ -0.48
RAB40C-202ENST00000509637 PLEKHJ1Q9NW61 149 aa12.07□□□□□ -0.48
RAB40C-202ENST00000509637 KCNK7Q9Y2U2 307 aa12.07□□□□□ -0.48
RAB40C-202ENST00000509637 SRMP19623 302 aa12.06□□□□□ -0.48
RAB40C-202ENST00000509637 RBM48Q5RL73 367 aaKnown RBP12.06□□□□□ -0.48
RAB40C-202ENST00000509637 ARHGAP5-AS1Q96IT6 56 aa12.06□□□□□ -0.48
RAB40C-202ENST00000509637 PECRQ9BY49 303 aa12.06□□□□□ -0.48
RAB40C-202ENST00000509637 HIPK2Q9H2X6 1198 aa12.06□□□□□ -0.48
RAB40C-202ENST00000509637 RBMY1BA6NDE4 496 aaKnown RBP12.05□□□□□ -0.48
RAB40C-202ENST00000509637 RBMY1EA6NEQ0 496 aaKnown RBP12.05□□□□□ -0.48
RAB40C-202ENST00000509637 ZNF785A8K8V0 405 aa12.05□□□□□ -0.48
RAB40C-202ENST00000509637 M0R1X1 148 aa12.05□□□□□ -0.48
RAB40C-202ENST00000509637 EBAG9O00559 213 aa12.05□□□□□ -0.48
RAB40C-202ENST00000509637 SPDEFO95238 335 aa12.05□□□□□ -0.48
RAB40C-202ENST00000509637 UCHL1P09936 223 aa12.05□□□□□ -0.48
RAB40C-202ENST00000509637 RBMY1DP0C7P1 496 aaKnown RBP12.05□□□□□ -0.48
RAB40C-202ENST00000509637 CLDN12P56749 244 aa12.05□□□□□ -0.48
RAB40C-202ENST00000509637 GLT8D1Q68CQ7 371 aa12.05□□□□□ -0.48
RAB40C-202ENST00000509637 CEACAM19Q7Z692 300 aa12.05□□□□□ -0.48
RAB40C-202ENST00000509637 SGPP2Q8IWX5 399 aa12.05□□□□□ -0.48
RAB40C-202ENST00000509637 SETD9Q8NE22 299 aa12.05□□□□□ -0.48
RAB40C-202ENST00000509637 PHYHIPQ92561 330 aa12.05□□□□□ -0.48
RAB40C-202ENST00000509637 TSNAXQ99598 290 aaKnown RBP12.05□□□□□ -0.48
RAB40C-202ENST00000509637 SPATA25Q9BR10 227 aa12.05□□□□□ -0.48
RAB40C-202ENST00000509637 TINAGL1Q9GZM7 467 aaPredicted RBP12.05□□□□□ -0.48
RAB40C-202ENST00000509637 WFDC10AQ9H1F0 79 aa12.05□□□□□ -0.48
RAB40C-202ENST00000509637 SLC35D1Q9NTN3 355 aa12.05□□□□□ -0.48
RAB40C-202ENST00000509637 RDH8Q9NYR8 311 aa12.05□□□□□ -0.48
RAB40C-202ENST00000509637 DMRT1Q9Y5R6 373 aa12.05□□□□□ -0.48
RAB40C-202ENST00000509637 ALMS1Q8TCU4 4167 aa12.04□□□□□ -0.48
RAB40C-202ENST00000509637 C13orf42A0A1B0GVH6 325 aa12.04□□□□□ -0.48
RAB40C-202ENST00000509637 MYL12BO14950 172 aa12.04□□□□□ -0.48
RAB40C-202ENST00000509637 BPNT1O95861 308 aa12.04□□□□□ -0.48
RAB40C-202ENST00000509637 PRH1P02810 166 aa12.04□□□□□ -0.48
RAB40C-202ENST00000509637 ZP3P21754 424 aa12.04□□□□□ -0.48
RAB40C-202ENST00000509637 ZBTB25P24278 435 aa12.04□□□□□ -0.48
RAB40C-202ENST00000509637 MAPK3P27361 379 aaPredicted RBP12.04□□□□□ -0.48
RAB40C-202ENST00000509637 ZNF45Q02386 682 aa12.04□□□□□ -0.48
RAB40C-202ENST00000509637 MED21Q13503 144 aa12.04□□□□□ -0.48
RAB40C-202ENST00000509637 IGSF11Q5DX21 431 aa12.04□□□□□ -0.48
RAB40C-202ENST00000509637 MOB1BQ7L9L4 216 aa12.04□□□□□ -0.48
RAB40C-202ENST00000509637 PDPNQ86YL7 162 aa12.04□□□□□ -0.48
RAB40C-202ENST00000509637 SDHAF2Q9NX18 166 aa12.04□□□□□ -0.48
RAB40C-202ENST00000509637 PEF1Q9UBV8 284 aaKnown RBP12.04□□□□□ -0.48
RAB40C-202ENST00000509637 AK6Q9Y3D8 172 aaKnown RBP12.04□□□□□ -0.48
RAB40C-202ENST00000509637 H3BUA1 57 aa12.03□□□□□ -0.48
RAB40C-202ENST00000509637 BRI3O95415 125 aa12.03□□□□□ -0.48
RAB40C-202ENST00000509637 CDK1P06493 297 aa12.03□□□□□ -0.48
RAB40C-202ENST00000509637 CD7P09564 240 aa12.03□□□□□ -0.48
RAB40C-202ENST00000509637 IRF3Q14653 427 aa12.03□□□□□ -0.48
RAB40C-202ENST00000509637 MOGAT2Q3SYC2 334 aa12.03□□□□□ -0.48
RAB40C-202ENST00000509637 C10orf67Q8IYJ2 551 aa12.03□□□□□ -0.48
RAB40C-202ENST00000509637 ADAD2Q8NCV1 583 aaKnown RBP12.03□□□□□ -0.48
RAB40C-202ENST00000509637 EDARADDQ8WWZ3 215 aa12.03□□□□□ -0.48
RAB40C-202ENST00000509637 TMEM203Q969S6 136 aa12.03□□□□□ -0.48
RAB40C-202ENST00000509637 KRTAP17-1Q9BYP8 105 aa12.03□□□□□ -0.48
RAB40C-202ENST00000509637 PLEKHA3Q9HB20 300 aa12.03□□□□□ -0.48
RAB40C-202ENST00000509637 HSF4Q9ULV5 492 aa12.03□□□□□ -0.48
RAB40C-202ENST00000509637 SELENOKQ9Y6D0 94 aa12.03□□□□□ -0.48
RAB40C-202ENST00000509637 MSGN1A6NI15 193 aa12.02□□□□□ -0.49
RAB40C-202ENST00000509637 BMPR1BO00238 502 aa12.02□□□□□ -0.49
RAB40C-202ENST00000509637 SLC17A2O00624 439 aa12.02□□□□□ -0.49
RAB40C-202ENST00000509637 GSTT2P0CG29 244 aa12.02□□□□□ -0.49
RAB40C-202ENST00000509637 GSTT2BP0CG30 244 aa12.02□□□□□ -0.49
RAB40C-202ENST00000509637 RPS25P62851 125 aaKnown RBP12.02□□□□□ -0.49
RAB40C-202ENST00000509637 HSD17B12Q53GQ0 312 aa12.02□□□□□ -0.49
RAB40C-202ENST00000509637 C8orf59Q8N0T1 100 aaPredicted RBP12.02□□□□□ -0.49
RAB40C-202ENST00000509637 MS4A15Q8N5U1 240 aa12.02□□□□□ -0.49
RAB40C-202ENST00000509637 BVESQ8NE79 360 aa12.02□□□□□ -0.49
RAB40C-202ENST00000509637 OR6M1Q8NGM8 313 aa12.02□□□□□ -0.49
RAB40C-202ENST00000509637 DDB2Q92466 427 aa12.02□□□□□ -0.49
RAB40C-202ENST00000509637 RIMS4Q9H426 269 aaPredicted RBP12.02□□□□□ -0.49
RAB40C-202ENST00000509637 SIGLEC8Q9NYZ4 499 aa12.02□□□□□ -0.49
RAB40C-202ENST00000509637 ZNF221Q9UK13 617 aa12.02□□□□□ -0.49
RAB40C-202ENST00000509637 IGKV1D-8A0A087WSZ0 117 aa12.01□□□□□ -0.49
RAB40C-202ENST00000509637 TRDCB7Z8K6 153 aa12.01□□□□□ -0.49
RAB40C-202ENST00000509637 CNIH1O95406 144 aa12.01□□□□□ -0.49
RAB40C-202ENST00000509637 TMEM177Q53S58 311 aa12.01□□□□□ -0.49
RAB40C-202ENST00000509637 RNLSQ5VYX0 342 aa12.01□□□□□ -0.49
RAB40C-202ENST00000509637 IDO2Q6ZQW0 420 aa12.01□□□□□ -0.49
RAB40C-202ENST00000509637 C19orf35Q6ZS72 473 aa12.01□□□□□ -0.49
RAB40C-202ENST00000509637 DEFB125Q8N687 156 aa12.01□□□□□ -0.49
RAB40C-202ENST00000509637 PACRGLQ8N7B6 248 aa12.01□□□□□ -0.49
RAB40C-202ENST00000509637 MAFIPQ8WZ33 124 aa12.01□□□□□ -0.49
RAB40C-202ENST00000509637 CMSS1Q9BQ75 279 aaKnown RBP12.01□□□□□ -0.49
RAB40C-202ENST00000509637 AKIP1Q9NQ31 210 aa12.01□□□□□ -0.49
RAB40C-202ENST00000509637 A0A0G2JLM5 398 aa12□□□□□ -0.49
RAB40C-202ENST00000509637 SHISA3A0PJX4 238 aa12□□□□□ -0.49
RAB40C-202ENST00000509637 LINC00473A8K010 186 aa12□□□□□ -0.49
RAB40C-202ENST00000509637 H0Y980 276 aa12□□□□□ -0.49
RAB40C-202ENST00000509637 CD40LGP29965 261 aa12□□□□□ -0.49
RAB40C-202ENST00000509637 LGALS7P47929 136 aa12□□□□□ -0.49
RAB40C-202ENST00000509637 SPHARQ15513 63 aa12□□□□□ -0.49
RAB40C-202ENST00000509637 C2orf76Q3KRA6 126 aa12□□□□□ -0.49
RAB40C-202ENST00000509637 CD300EQ496F6 205 aaPredicted RBP12□□□□□ -0.49
RAB40C-202ENST00000509637 C10orf55Q5SWW7 151 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms