RNA–Protein interactions for RNA: ENST00000509162.1

TOPBP1-207, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 811 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-207ENST00000509162 TRAV18A0A075B6X5 111 aa5.67□□□□□ -1.5
TOPBP1-207ENST00000509162 LINC00473A8K010 186 aa5.67□□□□□ -1.5
TOPBP1-207ENST00000509162 H3BMQ9 156 aa5.67□□□□□ -1.5
TOPBP1-207ENST00000509162 BET1O15155 118 aa5.67□□□□□ -1.5
TOPBP1-207ENST00000509162 PLXNB1O43157 2135 aa5.67□□□□□ -1.5
TOPBP1-207ENST00000509162 HPGDSO60760 199 aa5.67□□□□□ -1.5
TOPBP1-207ENST00000509162 TMEM127O75204 238 aa5.67□□□□□ -1.5
TOPBP1-207ENST00000509162 NDUFA3O95167 84 aa5.67□□□□□ -1.5
TOPBP1-207ENST00000509162 IGLV2-23P01705 113 aa5.67□□□□□ -1.5
TOPBP1-207ENST00000509162 HLA-DQB1P01920 261 aa5.67□□□□□ -1.5
TOPBP1-207ENST00000509162 IGKV1-16P04430 117 aa5.67□□□□□ -1.5
TOPBP1-207ENST00000509162 ELK1P19419 428 aa5.67□□□□□ -1.5
TOPBP1-207ENST00000509162 CEACAM3P40198 252 aa5.67□□□□□ -1.5
TOPBP1-207ENST00000509162 BRWD1-AS2P59051 145 aa5.67□□□□□ -1.5
TOPBP1-207ENST00000509162 RPL30P62888 115 aaKnown RBP5.67□□□□□ -1.5
TOPBP1-207ENST00000509162 TIMM50Q3ZCQ8 353 aa5.67□□□□□ -1.5
TOPBP1-207ENST00000509162 UBE2NLQ5JXB2 153 aa5.67□□□□□ -1.5
TOPBP1-207ENST00000509162 CCDC144NLQ6NUI1 221 aa5.67□□□□□ -1.5
TOPBP1-207ENST00000509162 ETV3LQ6ZN32 361 aa5.67□□□□□ -1.5
TOPBP1-207ENST00000509162 LCNL1Q6ZST4 164 aa5.67□□□□□ -1.5
TOPBP1-207ENST00000509162 C16orf82Q7Z2V1 217 aa5.67□□□□□ -1.5
TOPBP1-207ENST00000509162 CLVS1Q8IUQ0 354 aaPredicted RBP5.67□□□□□ -1.5
TOPBP1-207ENST00000509162 LAX1Q8IWV1 398 aa5.67□□□□□ -1.5
TOPBP1-207ENST00000509162 SAMD12Q8N8I0 201 aa5.67□□□□□ -1.5
TOPBP1-207ENST00000509162 OR2AK2Q8NG84 335 aa5.67□□□□□ -1.5
TOPBP1-207ENST00000509162 DYNC2LI1Q8TCX1 351 aa5.67□□□□□ -1.5
TOPBP1-207ENST00000509162 OR2D2Q9H210 308 aa5.67□□□□□ -1.5
TOPBP1-207ENST00000509162 RIMS4Q9H426 269 aaPredicted RBP5.67□□□□□ -1.5
TOPBP1-207ENST00000509162 VCX3AQ9NNX9 186 aa5.67□□□□□ -1.5
TOPBP1-207ENST00000509162 SDHAF2Q9NX18 166 aa5.67□□□□□ -1.5
TOPBP1-207ENST00000509162 KCNIP1Q9NZI2 227 aa5.67□□□□□ -1.5
TOPBP1-207ENST00000509162 ABRACLQ9P1F3 81 aa5.67□□□□□ -1.5
TOPBP1-207ENST00000509162 RNF150Q9ULK6 438 aa5.67□□□□□ -1.5
TOPBP1-207ENST00000509162 GAB2Q9UQC2 676 aa5.67□□□□□ -1.5
TOPBP1-207ENST00000509162 TET2Q6N021 2002 aaPredicted RBP5.66□□□□□ -1.5
TOPBP1-207ENST00000509162 FGF16O43320 207 aa5.66□□□□□ -1.5
TOPBP1-207ENST00000509162 GAPDHP04406 335 aaKnown RBP5.66□□□□□ -1.5
TOPBP1-207ENST00000509162 CRYBA1P05813 215 aa5.66□□□□□ -1.5
TOPBP1-207ENST00000509162 VSIG10L2P0DP72 767 aa5.66□□□□□ -1.5
TOPBP1-207ENST00000509162 EGR2P11161 476 aaPredicted RBP5.66□□□□□ -1.5
TOPBP1-207ENST00000509162 NFYAP23511 347 aaPredicted RBP5.66□□□□□ -1.5
TOPBP1-207ENST00000509162 CD1BP29016 333 aa5.66□□□□□ -1.5
TOPBP1-207ENST00000509162 CEACAM6P40199 344 aa5.66□□□□□ -1.5
TOPBP1-207ENST00000509162 MNDAP41218 407 aa5.66□□□□□ -1.5
TOPBP1-207ENST00000509162 VDAC2P45880 294 aaPredicted RBP5.66□□□□□ -1.5
TOPBP1-207ENST00000509162 GPR12P47775 334 aa5.66□□□□□ -1.5
TOPBP1-207ENST00000509162 ARFRP1Q13795 201 aa5.66□□□□□ -1.5
TOPBP1-207ENST00000509162 HES1Q14469 280 aa5.66□□□□□ -1.5
TOPBP1-207ENST00000509162 SRSF7Q16629 238 aaKnown RBP eCLIP5.66□□□□□ -1.5
TOPBP1-207ENST00000509162 PNLIPRP3Q17RR3 467 aa5.66□□□□□ -1.5
TOPBP1-207ENST00000509162 ZNF660Q6AZW8 331 aaPredicted RBP5.66□□□□□ -1.5
TOPBP1-207ENST00000509162 FAM71F2Q6NXP2 309 aa5.66□□□□□ -1.5
TOPBP1-207ENST00000509162 HOGA1Q86XE5 327 aa5.66□□□□□ -1.5
TOPBP1-207ENST00000509162 OR5AN1Q8NGI8 311 aa5.66□□□□□ -1.5
TOPBP1-207ENST00000509162 OR2T6Q8NHC8 308 aa5.66□□□□□ -1.5
TOPBP1-207ENST00000509162 ISOC1Q96CN7 298 aa5.66□□□□□ -1.5
TOPBP1-207ENST00000509162 S1PR3Q99500 378 aa5.66□□□□□ -1.5
TOPBP1-207ENST00000509162 CITED2Q99967 270 aaPredicted RBP5.66□□□□□ -1.5
TOPBP1-207ENST00000509162 RAB18Q9NP72 206 aa5.66□□□□□ -1.5
TOPBP1-207ENST00000509162 PITPNC1Q9UKF7 332 aa5.66□□□□□ -1.5
TOPBP1-207ENST00000509162 A0A0A6YYH2 397 aa5.65□□□□□ -1.5
TOPBP1-207ENST00000509162 IGHV7-81A0A0B4J1V7 117 aa5.65□□□□□ -1.5
TOPBP1-207ENST00000509162 A0A1B0GUS0 222 aa5.65□□□□□ -1.5
TOPBP1-207ENST00000509162 METTL21EPA6NDL7 271 aa5.65□□□□□ -1.5
TOPBP1-207ENST00000509162 A6NJ64 397 aa5.65□□□□□ -1.5
TOPBP1-207ENST00000509162 SRRM4A7MD48 611 aaKnown RBP5.65□□□□□ -1.5
TOPBP1-207ENST00000509162 H3BUI4 141 aa5.65□□□□□ -1.5
TOPBP1-207ENST00000509162 J3QRK9 145 aa5.65□□□□□ -1.5
TOPBP1-207ENST00000509162 M0R1X1 148 aa5.65□□□□□ -1.5
TOPBP1-207ENST00000509162 FCN1O00602 326 aa5.65□□□□□ -1.5
TOPBP1-207ENST00000509162 ARPC1BO15143 372 aaKnown RBP5.65□□□□□ -1.5
TOPBP1-207ENST00000509162 TXNL1O43396 289 aa5.65□□□□□ -1.5
TOPBP1-207ENST00000509162 XRCC3O43542 346 aa5.65□□□□□ -1.5
TOPBP1-207ENST00000509162 SOX15O60248 233 aa5.65□□□□□ -1.5
TOPBP1-207ENST00000509162 DIRAS3O95661 229 aa5.65□□□□□ -1.5
TOPBP1-207ENST00000509162 MOSP00540 346 aa5.65□□□□□ -1.5
TOPBP1-207ENST00000509162 IGHG2P01859 326 aa5.65□□□□□ -1.5
TOPBP1-207ENST00000509162 CRYGBP07316 175 aa5.65□□□□□ -1.5
TOPBP1-207ENST00000509162 OR8U9P0C7N5 309 aa5.65□□□□□ -1.5
TOPBP1-207ENST00000509162 AADACP22760 399 aa5.65□□□□□ -1.5
TOPBP1-207ENST00000509162 IL3RAP26951 378 aa5.65□□□□□ -1.5
TOPBP1-207ENST00000509162 BRS3P32247 399 aa5.65□□□□□ -1.5
TOPBP1-207ENST00000509162 GNG2P59768 71 aa5.65□□□□□ -1.5
TOPBP1-207ENST00000509162 ACTBP60709 375 aa5.65□□□□□ -1.5
TOPBP1-207ENST00000509162 RNASE12Q5GAN4 147 aaKnown RBP5.65□□□□□ -1.5
TOPBP1-207ENST00000509162 GPR141Q7Z602 305 aa5.65□□□□□ -1.5
TOPBP1-207ENST00000509162 ZNF329Q86UD4 541 aa5.65□□□□□ -1.5
TOPBP1-207ENST00000509162 RNF152Q8N8N0 203 aa5.65□□□□□ -1.5
TOPBP1-207ENST00000509162 OR8U1Q8NH10 309 aa5.65□□□□□ -1.5
TOPBP1-207ENST00000509162 GPX8Q8TED1 209 aa5.65□□□□□ -1.5
TOPBP1-207ENST00000509162 MRGPRFQ96AM1 343 aa5.65□□□□□ -1.5
TOPBP1-207ENST00000509162 ST6GALNAC5Q9BVH7 336 aa5.65□□□□□ -1.5
TOPBP1-207ENST00000509162 PRSS22Q9GZN4 317 aa5.65□□□□□ -1.5
TOPBP1-207ENST00000509162 SLIRPQ9GZT3 109 aaKnown RBP5.65□□□□□ -1.5
TOPBP1-207ENST00000509162 CCDC59Q9P031 241 aaKnown RBP5.65□□□□□ -1.5
TOPBP1-207ENST00000509162 COMMD3Q9UBI1 195 aa5.65□□□□□ -1.5
TOPBP1-207ENST00000509162 ANXA10Q9UJ72 324 aa5.65□□□□□ -1.5
TOPBP1-207ENST00000509162 A0A1B0GW64 132 aa5.64□□□□□ -1.51
TOPBP1-207ENST00000509162 G3V318 75 aa5.64□□□□□ -1.51
TOPBP1-207ENST00000509162 CTDSP2O14595 271 aa5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms