RNA–Protein interactions for RNA: ENST00000508848.5

POLR2J3-213, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 5

Gene POLR2J3, Length 1,030 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-213ENST00000508848 CADM3Q8N126 398 aa8.38□□□□□ -1.07
POLR2J3-213ENST00000508848 ZNF383Q8NA42 475 aa8.38□□□□□ -1.07
POLR2J3-213ENST00000508848 OR5AU1Q8NGC0 362 aa8.38□□□□□ -1.07
POLR2J3-213ENST00000508848 SNAPC3Q92966 411 aa8.38□□□□□ -1.07
POLR2J3-213ENST00000508848 ISOC1Q96CN7 298 aa8.38□□□□□ -1.07
POLR2J3-213ENST00000508848 FLYWCH2Q96CP2 140 aaKnown RBP8.38□□□□□ -1.07
POLR2J3-213ENST00000508848 OR2D2Q9H210 308 aa8.38□□□□□ -1.07
POLR2J3-213ENST00000508848 ZFP57Q9NU63 452 aa8.38□□□□□ -1.07
POLR2J3-213ENST00000508848 NDUFA13Q9P0J0 144 aa8.38□□□□□ -1.07
POLR2J3-213ENST00000508848 RNF150Q9ULK6 438 aa8.38□□□□□ -1.07
POLR2J3-213ENST00000508848 CEPT1Q9Y6K0 416 aa8.38□□□□□ -1.07
POLR2J3-213ENST00000508848 H3BMQ9 156 aa8.37□□□□□ -1.07
POLR2J3-213ENST00000508848 CTDSPLO15194 276 aa8.37□□□□□ -1.07
POLR2J3-213ENST00000508848 NOL3O60936 208 aaKnown RBP8.37□□□□□ -1.07
POLR2J3-213ENST00000508848 FBXO24O75426 580 aa8.37□□□□□ -1.07
POLR2J3-213ENST00000508848 IGLV2-14P01704 120 aa8.37□□□□□ -1.07
POLR2J3-213ENST00000508848 OPN1MWP04001 364 aa8.37□□□□□ -1.07
POLR2J3-213ENST00000508848 OPN1MW2P0DN77 364 aa8.37□□□□□ -1.07
POLR2J3-213ENST00000508848 OPN1MW3P0DN78 364 aa8.37□□□□□ -1.07
POLR2J3-213ENST00000508848 ARPC4P59998 168 aa8.37□□□□□ -1.07
POLR2J3-213ENST00000508848 EIF4EBP1Q13541 118 aaPredicted RBP8.37□□□□□ -1.07
POLR2J3-213ENST00000508848 MMDQ15546 238 aa8.37□□□□□ -1.07
POLR2J3-213ENST00000508848 RTL8BQ17RB0 113 aa8.37□□□□□ -1.07
POLR2J3-213ENST00000508848 C2orf68Q2NKX9 166 aa8.37□□□□□ -1.07
POLR2J3-213ENST00000508848 FAM131AQ6UXB0 335 aa8.37□□□□□ -1.07
POLR2J3-213ENST00000508848 ZNF562Q6V9R5 426 aa8.37□□□□□ -1.07
POLR2J3-213ENST00000508848 GVQW1Q8N7I0 195 aa8.37□□□□□ -1.07
POLR2J3-213ENST00000508848 OSR1Q8TAX0 266 aaPredicted RBP8.37□□□□□ -1.07
POLR2J3-213ENST00000508848 MAFIPQ8WZ33 124 aa8.37□□□□□ -1.07
POLR2J3-213ENST00000508848 AIFM2Q9BRQ8 373 aa8.37□□□□□ -1.07
POLR2J3-213ENST00000508848 SLIRPQ9GZT3 109 aaKnown RBP8.37□□□□□ -1.07
POLR2J3-213ENST00000508848 IFT46Q9NQC8 304 aa8.37□□□□□ -1.07
POLR2J3-213ENST00000508848 KIAA1456Q9P272 454 aa8.37□□□□□ -1.07
POLR2J3-213ENST00000508848 PRELID3BQ9Y3B1 194 aa8.37□□□□□ -1.07
POLR2J3-213ENST00000508848 RBM7Q9Y580 266 aaKnown RBP8.37□□□□□ -1.07
POLR2J3-213ENST00000508848 H7C2Y5 167 aa8.36□□□□□ -1.07
POLR2J3-213ENST00000508848 M0R1X1 148 aa8.36□□□□□ -1.07
POLR2J3-213ENST00000508848 RBFOX2O43251 390 aaKnown RBP eCLIP8.36□□□□□ -1.07
POLR2J3-213ENST00000508848 BRI3O95415 125 aa8.36□□□□□ -1.07
POLR2J3-213ENST00000508848 PPYP01298 95 aa8.36□□□□□ -1.07
POLR2J3-213ENST00000508848 IGHG4P01861 327 aa8.36□□□□□ -1.07
POLR2J3-213ENST00000508848 CRYGBP07316 175 aa8.36□□□□□ -1.07
POLR2J3-213ENST00000508848 FGF2P09038 288 aa8.36□□□□□ -1.07
POLR2J3-213ENST00000508848 VSIG10L2P0DP72 767 aa8.36□□□□□ -1.07
POLR2J3-213ENST00000508848 NFYAP23511 347 aaPredicted RBP8.36□□□□□ -1.07
POLR2J3-213ENST00000508848 FCGR2CP31995 323 aa8.36□□□□□ -1.07
POLR2J3-213ENST00000508848 RCVRNP35243 200 aa8.36□□□□□ -1.07
POLR2J3-213ENST00000508848 SLC35B1P78383 322 aa8.36□□□□□ -1.07
POLR2J3-213ENST00000508848 CBX3Q13185 183 aa8.36□□□□□ -1.07
POLR2J3-213ENST00000508848 ACTBL2Q562R1 376 aa8.36□□□□□ -1.07
POLR2J3-213ENST00000508848 ARSJQ5FYB0 599 aaPredicted RBP8.36□□□□□ -1.07
POLR2J3-213ENST00000508848 VAX1Q5SQQ9 334 aa8.36□□□□□ -1.07
POLR2J3-213ENST00000508848 LPCAT3Q6P1A2 487 aa8.36□□□□□ -1.07
POLR2J3-213ENST00000508848 STPG2Q8N412 459 aa8.36□□□□□ -1.07
POLR2J3-213ENST00000508848 TCTEX1D1Q8N7M0 179 aa8.36□□□□□ -1.07
POLR2J3-213ENST00000508848 TEX45Q8NA69 505 aa8.36□□□□□ -1.07
POLR2J3-213ENST00000508848 OR6F1Q8NGZ6 308 aa8.36□□□□□ -1.07
POLR2J3-213ENST00000508848 CD300LFQ8TDQ1 290 aa8.36□□□□□ -1.07
POLR2J3-213ENST00000508848 RITA1Q96K30 269 aa8.36□□□□□ -1.07
POLR2J3-213ENST00000508848 TMEM68Q96MH6 324 aa8.36□□□□□ -1.07
POLR2J3-213ENST00000508848 SOSTQ9BQB4 213 aa8.36□□□□□ -1.07
POLR2J3-213ENST00000508848 RBM38Q9H0Z9 239 aaKnown RBP8.36□□□□□ -1.07
POLR2J3-213ENST00000508848 MIXL1Q9H2W2 232 aa8.36□□□□□ -1.07
POLR2J3-213ENST00000508848 MMP27Q9H306 513 aa8.36□□□□□ -1.07
POLR2J3-213ENST00000508848 FAM212BQ9NTI7 297 aaPredicted RBP8.36□□□□□ -1.07
POLR2J3-213ENST00000508848 SLC35D1Q9NTN3 355 aa8.36□□□□□ -1.07
POLR2J3-213ENST00000508848 MTFP1Q9UDX5 166 aa8.36□□□□□ -1.07
POLR2J3-213ENST00000508848 RBMX2Q9Y388 322 aaKnown RBP8.36□□□□□ -1.07
POLR2J3-213ENST00000508848 NOTCH1P46531 2555 aa8.36□□□□□ -1.07
POLR2J3-213ENST00000508848 NOTCH3Q9UM47 2321 aa8.36□□□□□ -1.07
POLR2J3-213ENST00000508848 PSMB11A5LHX3 300 aa8.35□□□□□ -1.07
POLR2J3-213ENST00000508848 GABARAPH6UMI1 98 aa8.35□□□□□ -1.07
POLR2J3-213ENST00000508848 CTDSP2O14595 271 aa8.35□□□□□ -1.07
POLR2J3-213ENST00000508848 IGKV1-16P04430 117 aa8.35□□□□□ -1.07
POLR2J3-213ENST00000508848 ELANEP08246 267 aa8.35□□□□□ -1.07
POLR2J3-213ENST00000508848 PPIFP30405 207 aaKnown RBP8.35□□□□□ -1.07
POLR2J3-213ENST00000508848 KIR2DS2P43631 304 aa8.35□□□□□ -1.07
POLR2J3-213ENST00000508848 UCP3P55916 312 aa8.35□□□□□ -1.07
POLR2J3-213ENST00000508848 CFHR3Q02985 330 aa8.35□□□□□ -1.07
POLR2J3-213ENST00000508848 SRSF4Q08170 494 aaKnown RBP8.35□□□□□ -1.07
POLR2J3-213ENST00000508848 TMEM267Q0VDI3 215 aaPredicted RBP8.35□□□□□ -1.07
POLR2J3-213ENST00000508848 FOXE3Q13461 319 aa8.35□□□□□ -1.07
POLR2J3-213ENST00000508848 PSG5Q15238 335 aa8.35□□□□□ -1.07
POLR2J3-213ENST00000508848 AKIRIN2Q53H80 203 aa8.35□□□□□ -1.07
POLR2J3-213ENST00000508848 PYHIN1Q6K0P9 492 aa8.35□□□□□ -1.07
POLR2J3-213ENST00000508848 TEX38Q6PEX7 206 aa8.35□□□□□ -1.07
POLR2J3-213ENST00000508848 PPP1R27Q86WC6 154 aa8.35□□□□□ -1.07
POLR2J3-213ENST00000508848 BVESQ8NE79 360 aa8.35□□□□□ -1.07
POLR2J3-213ENST00000508848 OR4X2Q8NGF9 303 aa8.35□□□□□ -1.07
POLR2J3-213ENST00000508848 FCAMRQ8WWV6 532 aa8.35□□□□□ -1.07
POLR2J3-213ENST00000508848 OR51J1Q9H342 316 aa8.35□□□□□ -1.07
POLR2J3-213ENST00000508848 MRPS7Q9Y2R9 242 aaKnown RBP8.35□□□□□ -1.07
POLR2J3-213ENST00000508848 TSSC4Q9Y5U2 329 aaPredicted RBP8.35□□□□□ -1.07
POLR2J3-213ENST00000508848 NUBP2Q9Y5Y2 271 aa8.35□□□□□ -1.07
POLR2J3-213ENST00000508848 IGHV7-81A0A0B4J1V7 117 aa8.34□□□□□ -1.07
POLR2J3-213ENST00000508848 IGKV1D-13A0A0B4J2D9 117 aa8.34□□□□□ -1.07
POLR2J3-213ENST00000508848 ADARB2-AS1A8MUL3 147 aa8.34□□□□□ -1.07
POLR2J3-213ENST00000508848 FAM25AB3EWG3 89 aa8.34□□□□□ -1.07
POLR2J3-213ENST00000508848 FAM25CB3EWG5 89 aa8.34□□□□□ -1.07
POLR2J3-213ENST00000508848 FAM25GB3EWG6 89 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms