RNA–Protein interactions for RNA: ENST00000507965.5

ATXN3-210, Transcript of ataxin 3, human

TSL 2

Gene ATXN3, Length 708 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATXN3-210	ENST00000507965	MRPS28	Q9Y2Q9	187 aa	Known RBP	4.24	□□□□□ -1.73
ATXN3-210	ENST00000507965	ORC6	Q9Y5N6	252 aa		4.24	□□□□□ -1.73
ATXN3-210	ENST00000507965	GMPPB	Q9Y5P6	360 aa		4.24	□□□□□ -1.73
ATXN3-210	ENST00000507965	DNAH1	Q9P2D7	4330 aa		4.24	□□□□□ -1.73
ATXN3-210	ENST00000507965	SORL1	Q92673	2214 aa		4.23	□□□□□ -1.73
ATXN3-210	ENST00000507965		A0A1W2PPK0	400 aa		4.23	□□□□□ -1.73
ATXN3-210	ENST00000507965	MCRIP1	C9JLW8	97 aa		4.23	□□□□□ -1.73
ATXN3-210	ENST00000507965	FCN1	O00602	326 aa		4.23	□□□□□ -1.73
ATXN3-210	ENST00000507965	SC5D	O75845	299 aa		4.23	□□□□□ -1.73
ATXN3-210	ENST00000507965	NDUFA3	O95167	84 aa		4.23	□□□□□ -1.73
ATXN3-210	ENST00000507965	FADS2	O95864	444 aa	Known RBP	4.23	□□□□□ -1.73
ATXN3-210	ENST00000507965	MAS1	P04201	325 aa		4.23	□□□□□ -1.73
ATXN3-210	ENST00000507965	CD2	P06729	351 aa		4.23	□□□□□ -1.73
ATXN3-210	ENST00000507965	OR8U9	P0C7N5	309 aa		4.23	□□□□□ -1.73
ATXN3-210	ENST00000507965	MGMT	P16455	207 aa		4.23	□□□□□ -1.73
ATXN3-210	ENST00000507965	ALDH3B2	P48448	385 aa		4.23	□□□□□ -1.73
ATXN3-210	ENST00000507965	ALDH3A2	P51648	485 aa		4.23	□□□□□ -1.73
ATXN3-210	ENST00000507965	RPS11	P62280	158 aa	Known RBP eCLIP	4.23	□□□□□ -1.73
ATXN3-210	ENST00000507965	PITPNA	Q00169	270 aa		4.23	□□□□□ -1.73
ATXN3-210	ENST00000507965	RAB40B	Q12829	278 aa		4.23	□□□□□ -1.73
ATXN3-210	ENST00000507965	MRPL28	Q13084	256 aa	Known RBP	4.23	□□□□□ -1.73
ATXN3-210	ENST00000507965	RPL39P5	Q59GN2	51 aa		4.23	□□□□□ -1.73
ATXN3-210	ENST00000507965	C6orf183	Q5T699	404 aa		4.23	□□□□□ -1.73
ATXN3-210	ENST00000507965	KRTAP5-11	Q6L8G4	156 aa		4.23	□□□□□ -1.73
ATXN3-210	ENST00000507965	GLIPR1L1	Q6UWM5	242 aa		4.23	□□□□□ -1.73
ATXN3-210	ENST00000507965	GLDN	Q6ZMI3	551 aa	Predicted RBP	4.23	□□□□□ -1.73
ATXN3-210	ENST00000507965		Q6ZNX1	250 aa		4.23	□□□□□ -1.73
ATXN3-210	ENST00000507965	ZNF833P	Q6ZTB9	187 aa		4.23	□□□□□ -1.73
ATXN3-210	ENST00000507965	GAPT	Q8N292	157 aa		4.23	□□□□□ -1.73
ATXN3-210	ENST00000507965	JAGN1	Q8N5M9	183 aa		4.23	□□□□□ -1.73
ATXN3-210	ENST00000507965	PACRGL	Q8N7B6	248 aa		4.23	□□□□□ -1.73
ATXN3-210	ENST00000507965	OR6Q1	Q8NGQ2	317 aa		4.23	□□□□□ -1.73
ATXN3-210	ENST00000507965	MRPL30	Q8TCC3	161 aa	Known RBP	4.23	□□□□□ -1.73
ATXN3-210	ENST00000507965	FAM46B	Q96A09	425 aa		4.23	□□□□□ -1.73
ATXN3-210	ENST00000507965	ISOC1	Q96CN7	298 aa		4.23	□□□□□ -1.73
ATXN3-210	ENST00000507965	SMIM19	Q96E16	107 aa		4.23	□□□□□ -1.73
ATXN3-210	ENST00000507965	MRPL48	Q96GC5	212 aa	Known RBP	4.23	□□□□□ -1.73
ATXN3-210	ENST00000507965	PGLYRP3	Q96LB9	341 aa		4.23	□□□□□ -1.73
ATXN3-210	ENST00000507965	CNBD2	Q96M20	576 aa		4.23	□□□□□ -1.73
ATXN3-210	ENST00000507965	MS4A10	Q96PG2	267 aa		4.23	□□□□□ -1.73
ATXN3-210	ENST00000507965	TSC22D3	Q99576	134 aa		4.23	□□□□□ -1.73
ATXN3-210	ENST00000507965	S100A13	Q99584	98 aa		4.23	□□□□□ -1.73
ATXN3-210	ENST00000507965	ZNF251	Q9BRH9	671 aa		4.23	□□□□□ -1.73
ATXN3-210	ENST00000507965	MRPS26	Q9BYN8	205 aa	Known RBP	4.23	□□□□□ -1.73
ATXN3-210	ENST00000507965	KCNK15	Q9H427	330 aa		4.23	□□□□□ -1.73
ATXN3-210	ENST00000507965		Q9H521	79 aa		4.23	□□□□□ -1.73
ATXN3-210	ENST00000507965	JPT1	Q9UK76	154 aa		4.23	□□□□□ -1.73
ATXN3-210	ENST00000507965	FOXA2	Q9Y261	457 aa	Predicted RBP	4.23	□□□□□ -1.73
ATXN3-210	ENST00000507965	PEX16	Q9Y5Y5	336 aa		4.23	□□□□□ -1.73
ATXN3-210	ENST00000507965	TRGV11	A0A075B6L2	103 aa		4.22	□□□□□ -1.73
ATXN3-210	ENST00000507965	TRBV5-5	A0A0J9YX44	114 aa		4.22	□□□□□ -1.73
ATXN3-210	ENST00000507965	PNMA8C	A0A1B0GUJ8	204 aa		4.22	□□□□□ -1.73
ATXN3-210	ENST00000507965	SMIM31	A0A1B0GVY4	71 aa		4.22	□□□□□ -1.73
ATXN3-210	ENST00000507965	SNTN	A6NMZ2	147 aa		4.22	□□□□□ -1.73
ATXN3-210	ENST00000507965	LDLRAD4	O15165	306 aa		4.22	□□□□□ -1.73
ATXN3-210	ENST00000507965	ZNF780A	O75290	641 aa	Predicted RBP	4.22	□□□□□ -1.73
ATXN3-210	ENST00000507965	PROP1	O75360	226 aa		4.22	□□□□□ -1.73
ATXN3-210	ENST00000507965	WBP4	O75554	376 aa	Known RBP	4.22	□□□□□ -1.73
ATXN3-210	ENST00000507965	CRTAP	O75718	401 aa	Predicted RBP	4.22	□□□□□ -1.73
ATXN3-210	ENST00000507965	TNFAIP8	O95379	198 aa		4.22	□□□□□ -1.73
ATXN3-210	ENST00000507965	IGLV1-51	P01701	117 aa		4.22	□□□□□ -1.73
ATXN3-210	ENST00000507965	GNAO1	P09471	354 aa		4.22	□□□□□ -1.73
ATXN3-210	ENST00000507965	RPL5	P46777	297 aa	Known RBP	4.22	□□□□□ -1.73
ATXN3-210	ENST00000507965	CRIP2	P52943	208 aa	Predicted RBP	4.22	□□□□□ -1.73
ATXN3-210	ENST00000507965	TPPP2	P59282	170 aa		4.22	□□□□□ -1.73
ATXN3-210	ENST00000507965	CX3CL1	P78423	397 aa		4.22	□□□□□ -1.73
ATXN3-210	ENST00000507965	HMGN3	Q15651	99 aa		4.22	□□□□□ -1.73
ATXN3-210	ENST00000507965	BAK1	Q16611	211 aa		4.22	□□□□□ -1.73
ATXN3-210	ENST00000507965	TMEM30B	Q3MIR4	351 aa		4.22	□□□□□ -1.73
ATXN3-210	ENST00000507965	C6orf141	Q5SZD1	244 aa		4.22	□□□□□ -1.73
ATXN3-210	ENST00000507965	DMKN	Q6E0U4	476 aa	Predicted RBP	4.22	□□□□□ -1.73
ATXN3-210	ENST00000507965	AWAT2	Q6E213	333 aa		4.22	□□□□□ -1.73
ATXN3-210	ENST00000507965	RPL22L1	Q6P5R6	122 aa	Known RBP	4.22	□□□□□ -1.73
ATXN3-210	ENST00000507965	TRAT1	Q6PIZ9	186 aa		4.22	□□□□□ -1.73
ATXN3-210	ENST00000507965	LYPD6	Q86Y78	171 aa		4.22	□□□□□ -1.73
ATXN3-210	ENST00000507965	NPB	Q8NG41	125 aa		4.22	□□□□□ -1.73
ATXN3-210	ENST00000507965	RHOXF1	Q8NHV9	184 aa		4.22	□□□□□ -1.73
ATXN3-210	ENST00000507965	MRPS24	Q96EL2	167 aa	Known RBP	4.22	□□□□□ -1.73
ATXN3-210	ENST00000507965	RDH12	Q96NR8	316 aa		4.22	□□□□□ -1.73
ATXN3-210	ENST00000507965	CLCC1	Q96S66	551 aa		4.22	□□□□□ -1.73
ATXN3-210	ENST00000507965	FAM110A	Q9BQ89	295 aa		4.22	□□□□□ -1.73
ATXN3-210	ENST00000507965	SULT4A1	Q9BR01	284 aa		4.22	□□□□□ -1.73
ATXN3-210	ENST00000507965	CHCHD6	Q9BRQ6	235 aa		4.22	□□□□□ -1.73
ATXN3-210	ENST00000507965	SELENOI	Q9C0D9	397 aa		4.22	□□□□□ -1.73
ATXN3-210	ENST00000507965	CST11	Q9H112	138 aa		4.22	□□□□□ -1.73
ATXN3-210	ENST00000507965	SPACA1	Q9HBV2	294 aa		4.22	□□□□□ -1.73
ATXN3-210	ENST00000507965	FGF20	Q9NP95	211 aa	Predicted RBP	4.22	□□□□□ -1.73
ATXN3-210	ENST00000507965	PAK1IP1	Q9NWT1	392 aa	Predicted RBP	4.22	□□□□□ -1.73
ATXN3-210	ENST00000507965	NDUFA13	Q9P0J0	144 aa		4.22	□□□□□ -1.73
ATXN3-210	ENST00000507965	CLEC2D	Q9UHP7	191 aa		4.22	□□□□□ -1.73
ATXN3-210	ENST00000507965	CEPT1	Q9Y6K0	416 aa		4.22	□□□□□ -1.73
ATXN3-210	ENST00000507965	TRBV5-7	A0A0A0MS05	114 aa		4.21	□□□□□ -1.74
ATXN3-210	ENST00000507965	IZUMO1R	A6ND01	250 aa		4.21	□□□□□ -1.74
ATXN3-210	ENST00000507965		H0YJW9	148 aa		4.21	□□□□□ -1.74
ATXN3-210	ENST00000507965	RRH	O14718	337 aa		4.21	□□□□□ -1.74
ATXN3-210	ENST00000507965	ARPC1B	O15143	372 aa	Known RBP	4.21	□□□□□ -1.74
ATXN3-210	ENST00000507965	OGG1	O15527	345 aa		4.21	□□□□□ -1.74
ATXN3-210	ENST00000507965	HSPA12A	O43301	675 aa		4.21	□□□□□ -1.74
ATXN3-210	ENST00000507965	YPEL1	O60688	119 aa		4.21	□□□□□ -1.74
ATXN3-210	ENST00000507965	PDCD6	O75340	191 aa		4.21	□□□□□ -1.74

Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms