RNA–Protein interactions for RNA: ENST00000507778.1

HMGB1P28-201, Transcript of high mobility group box 1 pseudogene 28, humanhuman

BASIC

Gene HMGB1P28, Length 552 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P28-201ENST00000507778 ALOX5APP20292 161 aa1.61□□□□□ -2.15
HMGB1P28-201ENST00000507778 CDC34P49427 236 aaPredicted RBP1.61□□□□□ -2.15
HMGB1P28-201ENST00000507778 KRTAP12-1P59990 96 aa1.61□□□□□ -2.15
HMGB1P28-201ENST00000507778 CXCR4P61073 352 aa1.61□□□□□ -2.15
HMGB1P28-201ENST00000507778 HLA-DRB3P79483 266 aa1.61□□□□□ -2.15
HMGB1P28-201ENST00000507778 HES1Q14469 280 aa1.61□□□□□ -2.15
HMGB1P28-201ENST00000507778 Q8N402 240 aa1.61□□□□□ -2.15
HMGB1P28-201ENST00000507778 CNEP1R1Q8N9A8 125 aa1.61□□□□□ -2.15
HMGB1P28-201ENST00000507778 OR4X1Q8NH49 305 aa1.61□□□□□ -2.15
HMGB1P28-201ENST00000507778 FGF13Q92913 245 aa1.61□□□□□ -2.15
HMGB1P28-201ENST00000507778 OR52B2Q96RD2 323 aa1.61□□□□□ -2.15
HMGB1P28-201ENST00000507778 Q9BRP9 147 aa1.61□□□□□ -2.15
HMGB1P28-201ENST00000507778 LLPHQ9BRT6 129 aaKnown RBP1.61□□□□□ -2.15
HMGB1P28-201ENST00000507778 DERL2Q9GZP9 239 aa1.61□□□□□ -2.15
HMGB1P28-201ENST00000507778 DRC3Q9H069 523 aa1.61□□□□□ -2.15
HMGB1P28-201ENST00000507778 ATP6V1DQ9Y5K8 247 aa1.61□□□□□ -2.15
HMGB1P28-201ENST00000507778 EIF4G1Q04637 1599 aaKnown RBP1.6□□□□□ -2.15
HMGB1P28-201ENST00000507778 GNRH2O43555 120 aa1.6□□□□□ -2.15
HMGB1P28-201ENST00000507778 SSNA1O43805 119 aa1.6□□□□□ -2.15
HMGB1P28-201ENST00000507778 NDUFB2O95178 105 aa1.6□□□□□ -2.15
HMGB1P28-201ENST00000507778 XCL1P47992 114 aa1.6□□□□□ -2.15
HMGB1P28-201ENST00000507778 HINT1P49773 126 aaPredicted RBP1.6□□□□□ -2.15
HMGB1P28-201ENST00000507778 EMP2P54851 167 aa1.6□□□□□ -2.15
HMGB1P28-201ENST00000507778 RPS24P62847 133 aaKnown RBP1.6□□□□□ -2.15
HMGB1P28-201ENST00000507778 N4BP2L1Q5TBK1 243 aaPredicted RBP1.6□□□□□ -2.15
HMGB1P28-201ENST00000507778 AGTRAPQ6RW13 159 aa1.6□□□□□ -2.15
HMGB1P28-201ENST00000507778 FAM151BQ6UXP7 276 aa1.6□□□□□ -2.15
HMGB1P28-201ENST00000507778 NAA40Q86UY6 237 aa1.6□□□□□ -2.15
HMGB1P28-201ENST00000507778 SLC35F6Q8N357 371 aa1.6□□□□□ -2.15
HMGB1P28-201ENST00000507778 ZNF283Q8N7M2 679 aa1.6□□□□□ -2.15
HMGB1P28-201ENST00000507778 RPS4Y2Q8TD47 263 aa1.6□□□□□ -2.15
HMGB1P28-201ENST00000507778 ANKRD36BP1Q96IX9 119 aa1.6□□□□□ -2.15
HMGB1P28-201ENST00000507778 TMEM109Q9BVC6 243 aa1.6□□□□□ -2.15
HMGB1P28-201ENST00000507778 HES4Q9HCC6 221 aa1.6□□□□□ -2.15
HMGB1P28-201ENST00000507778 NDUFB11Q9NX14 153 aa1.6□□□□□ -2.15
HMGB1P28-201ENST00000507778 VWDEQ8N2E2 1590 aa1.59□□□□□ -2.15
HMGB1P28-201ENST00000507778 C2orf74A8MZ97 194 aa1.59□□□□□ -2.15
HMGB1P28-201ENST00000507778 COX5BP10606 129 aa1.59□□□□□ -2.15
HMGB1P28-201ENST00000507778 DDTP30046 118 aa1.59□□□□□ -2.15
HMGB1P28-201ENST00000507778 TAS2R30P59541 319 aa1.59□□□□□ -2.15
HMGB1P28-201ENST00000507778 HOXC5Q00444 222 aa1.59□□□□□ -2.15
HMGB1P28-201ENST00000507778 GNA12Q03113 381 aa1.59□□□□□ -2.15
HMGB1P28-201ENST00000507778 COTL1Q14019 142 aa1.59□□□□□ -2.15
HMGB1P28-201ENST00000507778 PCOTHQ58A44 107 aa1.59□□□□□ -2.15
HMGB1P28-201ENST00000507778 CST9Q5W186 159 aa1.59□□□□□ -2.15
HMGB1P28-201ENST00000507778 TNFAIP8L2Q6P589 184 aaPredicted RBP1.59□□□□□ -2.15
HMGB1P28-201ENST00000507778 DAND5Q8N907 189 aa1.59□□□□□ -2.15
HMGB1P28-201ENST00000507778 OR4X2Q8NGF9 303 aa1.59□□□□□ -2.15
HMGB1P28-201ENST00000507778 DCANP1Q8TF63 244 aa1.59□□□□□ -2.15
HMGB1P28-201ENST00000507778 EEF1AKMT1Q8WVE0 214 aa1.59□□□□□ -2.15
HMGB1P28-201ENST00000507778 C12orf43Q96C57 262 aaKnown RBP1.59□□□□□ -2.15
HMGB1P28-201ENST00000507778 SLC35G5Q96KT7 338 aa1.59□□□□□ -2.15
HMGB1P28-201ENST00000507778 C15orf41Q9Y2V0 281 aa1.59□□□□□ -2.15
HMGB1P28-201ENST00000507778 DOCK6Q96HP0 2047 aa1.59□□□□□ -2.16
HMGB1P28-201ENST00000507778 MDFIC2A0A1B0GVS7 189 aa1.58□□□□□ -2.16
HMGB1P28-201ENST00000507778 OR6C6A6NF89 314 aa1.58□□□□□ -2.16
HMGB1P28-201ENST00000507778 PFDN6O15212 129 aa1.58□□□□□ -2.16
HMGB1P28-201ENST00000507778 APOEP02649 317 aa1.58□□□□□ -2.16
HMGB1P28-201ENST00000507778 HLA-DQB2P05538 268 aa1.58□□□□□ -2.16
HMGB1P28-201ENST00000507778 OCM2P0CE71 109 aa1.58□□□□□ -2.16
HMGB1P28-201ENST00000507778 GABRA2P47869 451 aa1.58□□□□□ -2.16
HMGB1P28-201ENST00000507778 TBPL1P62380 186 aa1.58□□□□□ -2.16
HMGB1P28-201ENST00000507778 JOSD1Q15040 202 aaPredicted RBP1.58□□□□□ -2.16
HMGB1P28-201ENST00000507778 UAP1Q16222 522 aaPredicted RBP1.58□□□□□ -2.16
HMGB1P28-201ENST00000507778 SLC36A2Q495M3 483 aa1.58□□□□□ -2.16
HMGB1P28-201ENST00000507778 CLDND2Q8NHS1 167 aa1.58□□□□□ -2.16
HMGB1P28-201ENST00000507778 BABAM2Q9NXR7 383 aa1.58□□□□□ -2.16
HMGB1P28-201ENST00000507778 NKIRAS1Q9NYS0 192 aa1.58□□□□□ -2.16
HMGB1P28-201ENST00000507778 KLK5Q9Y337 293 aaPredicted RBP1.58□□□□□ -2.16
HMGB1P28-201ENST00000507778 FAM215AQ9Y5M1 114 aa1.58□□□□□ -2.16
HMGB1P28-201ENST00000507778 THSD7AQ9UPZ6 1657 aa1.58□□□□□ -2.16
HMGB1P28-201ENST00000507778 KMT2EQ8IZD2 1858 aa1.57□□□□□ -2.16
HMGB1P28-201ENST00000507778 A0A0G2JQZ4 141 aa1.57□□□□□ -2.16
HMGB1P28-201ENST00000507778 A0A1W2PQD3 144 aa1.57□□□□□ -2.16
HMGB1P28-201ENST00000507778 TYMSP04818 313 aa1.57□□□□□ -2.16
HMGB1P28-201ENST00000507778 UCHL1P09936 223 aa1.57□□□□□ -2.16
HMGB1P28-201ENST00000507778 ZNF728P0DKX0 622 aa1.57□□□□□ -2.16
HMGB1P28-201ENST00000507778 C8orf88P0DMB2 117 aa1.57□□□□□ -2.16
HMGB1P28-201ENST00000507778 CD24P25063 80 aa1.57□□□□□ -2.16
HMGB1P28-201ENST00000507778 RPL27AP46776 148 aaKnown RBP1.57□□□□□ -2.16
HMGB1P28-201ENST00000507778 BLVRAP53004 296 aa1.57□□□□□ -2.16
HMGB1P28-201ENST00000507778 CTBP2P56545 445 aa1.57□□□□□ -2.16
HMGB1P28-201ENST00000507778 RBM11P57052 281 aaKnown RBP1.57□□□□□ -2.16
HMGB1P28-201ENST00000507778 ZNF90Q03938 601 aa1.57□□□□□ -2.16
HMGB1P28-201ENST00000507778 MLLT11Q13015 90 aaPredicted RBP1.57□□□□□ -2.16
HMGB1P28-201ENST00000507778 PPP1R1AQ13522 171 aa1.57□□□□□ -2.16
HMGB1P28-201ENST00000507778 PLPPR5Q32ZL2 321 aa1.57□□□□□ -2.16
HMGB1P28-201ENST00000507778 Q6ZS52 159 aa1.57□□□□□ -2.16
HMGB1P28-201ENST00000507778 SPATA12Q7Z6I5 190 aa1.57□□□□□ -2.16
HMGB1P28-201ENST00000507778 LHFPL1Q86WI0 220 aa1.57□□□□□ -2.16
HMGB1P28-201ENST00000507778 TMEM156Q8N614 296 aa1.57□□□□□ -2.16
HMGB1P28-201ENST00000507778 OTUD6BQ8N6M0 293 aa1.57□□□□□ -2.16
HMGB1P28-201ENST00000507778 UBL4BQ8N7F7 174 aa1.57□□□□□ -2.16
HMGB1P28-201ENST00000507778 JOSD2Q8TAC2 188 aa1.57□□□□□ -2.16
HMGB1P28-201ENST00000507778 RNASE6Q93091 150 aaKnown RBP1.57□□□□□ -2.16
HMGB1P28-201ENST00000507778 SFRP2Q96HF1 295 aa1.57□□□□□ -2.16
HMGB1P28-201ENST00000507778 NMNAT3Q96T66 252 aa1.57□□□□□ -2.16
HMGB1P28-201ENST00000507778 TMEM222Q9H0R3 208 aa1.57□□□□□ -2.16
HMGB1P28-201ENST00000507778 ZNHIT6Q9NWK9 470 aaKnown RBP1.57□□□□□ -2.16
HMGB1P28-201ENST00000507778 USE1Q9NZ43 259 aa1.57□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms