RNA–Protein interactions for RNA: ENST00000507162.1

VCAN-207, Transcript of versican, humanhuman

TSL 3

Gene VCAN, Length 766 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-207ENST00000507162 KCNIP1Q9NZI2 227 aa5.17□□□□□ -1.58
VCAN-207ENST00000507162 MRPL27Q9P0M9 148 aaKnown RBP5.17□□□□□ -1.58
VCAN-207ENST00000507162 TMED3Q9Y3Q3 217 aa5.17□□□□□ -1.58
VCAN-207ENST00000507162 NACAE9PAV3 2078 aa5.16□□□□□ -1.58
VCAN-207ENST00000507162 TRBV9A0A0B4J1U6 114 aa5.16□□□□□ -1.58
VCAN-207ENST00000507162 NDUFAB1O14561 156 aa5.16□□□□□ -1.58
VCAN-207ENST00000507162 TGOLN2O43493 480 aa5.16□□□□□ -1.58
VCAN-207ENST00000507162 CDRT1O95170 752 aa5.16□□□□□ -1.58
VCAN-207ENST00000507162 MAS1P04201 325 aa5.16□□□□□ -1.58
VCAN-207ENST00000507162 IGKV1-16P04430 117 aa5.16□□□□□ -1.58
VCAN-207ENST00000507162 UBCP0CG48 685 aaKnown RBP5.16□□□□□ -1.58
VCAN-207ENST00000507162 C8orf88P0DMB2 117 aa5.16□□□□□ -1.58
VCAN-207ENST00000507162 MIFP14174 115 aa5.16□□□□□ -1.58
VCAN-207ENST00000507162 RPA2P15927 270 aa5.16□□□□□ -1.58
VCAN-207ENST00000507162 FAM209BQ5JX69 171 aa5.16□□□□□ -1.58
VCAN-207ENST00000507162 TMEM236Q5W0B7 351 aa5.16□□□□□ -1.58
VCAN-207ENST00000507162 UNQ9165/PRO28630Q6UXU0 137 aa5.16□□□□□ -1.58
VCAN-207ENST00000507162 BCDIN3DQ7Z5W3 292 aaKnown RBP5.16□□□□□ -1.58
VCAN-207ENST00000507162 NECAP1Q8NC96 275 aa5.16□□□□□ -1.58
VCAN-207ENST00000507162 PXT1Q8NFP0 134 aa5.16□□□□□ -1.58
VCAN-207ENST00000507162 OR52N1Q8NH53 320 aa5.16□□□□□ -1.58
VCAN-207ENST00000507162 STON2Q8WXE9 905 aa5.16□□□□□ -1.58
VCAN-207ENST00000507162 ATG101Q9BSB4 218 aa5.16□□□□□ -1.58
VCAN-207ENST00000507162 TEX12Q9BXU0 123 aa5.16□□□□□ -1.58
VCAN-207ENST00000507162 YTHDF1Q9BYJ9 559 aaKnown RBP5.16□□□□□ -1.58
VCAN-207ENST00000507162 IFT22Q9H7X7 185 aa5.16□□□□□ -1.58
VCAN-207ENST00000507162 GORASP2Q9H8Y8 452 aa5.16□□□□□ -1.58
VCAN-207ENST00000507162 ADGRL4Q9HBW9 690 aa5.16□□□□□ -1.58
VCAN-207ENST00000507162 SAR1AQ9NR31 198 aa5.16□□□□□ -1.58
VCAN-207ENST00000507162 H2AFY2Q9P0M6 372 aaPredicted RBP5.16□□□□□ -1.58
VCAN-207ENST00000507162 PIPOXQ9P0Z9 390 aa5.16□□□□□ -1.58
VCAN-207ENST00000507162 A8MWP6 167 aa5.15□□□□□ -1.59
VCAN-207ENST00000507162 MCRIP1C9JLW8 97 aa5.15□□□□□ -1.59
VCAN-207ENST00000507162 ARPC2O15144 300 aa5.15□□□□□ -1.59
VCAN-207ENST00000507162 SNX3O60493 162 aa5.15□□□□□ -1.59
VCAN-207ENST00000507162 YPEL1O60688 119 aa5.15□□□□□ -1.59
VCAN-207ENST00000507162 MRPS14O60783 128 aaKnown RBP5.15□□□□□ -1.59
VCAN-207ENST00000507162 SPDEFO95238 335 aa5.15□□□□□ -1.59
VCAN-207ENST00000507162 CTSDP07339 412 aaPredicted RBP5.15□□□□□ -1.59
VCAN-207ENST00000507162 HTN3P15516 51 aa5.15□□□□□ -1.59
VCAN-207ENST00000507162 TNXAQ16473 311 aa5.15□□□□□ -1.59
VCAN-207ENST00000507162 CD300LDQ6UXZ3 194 aa5.15□□□□□ -1.59
VCAN-207ENST00000507162 C15orf53Q8NAA6 179 aa5.15□□□□□ -1.59
VCAN-207ENST00000507162 OR10G2Q8NGC3 310 aa5.15□□□□□ -1.59
VCAN-207ENST00000507162 OR5AN1Q8NGI8 311 aa5.15□□□□□ -1.59
VCAN-207ENST00000507162 SVIPQ8NHG7 77 aa5.15□□□□□ -1.59
VCAN-207ENST00000507162 PELI1Q96FA3 418 aa5.15□□□□□ -1.59
VCAN-207ENST00000507162 ABHD14BQ96IU4 210 aa5.15□□□□□ -1.59
VCAN-207ENST00000507162 YPEL2Q96QA6 119 aa5.15□□□□□ -1.59
VCAN-207ENST00000507162 FEVQ99581 238 aa5.15□□□□□ -1.59
VCAN-207ENST00000507162 SULT4A1Q9BR01 284 aa5.15□□□□□ -1.59
VCAN-207ENST00000507162 IFI27L2Q9H2X8 130 aa5.15□□□□□ -1.59
VCAN-207ENST00000507162 CLN6Q9NWW5 311 aa5.15□□□□□ -1.59
VCAN-207ENST00000507162 JPT1Q9UK76 154 aa5.15□□□□□ -1.59
VCAN-207ENST00000507162 UFC1Q9Y3C8 167 aa5.15□□□□□ -1.59
VCAN-207ENST00000507162 SAMHD1Q9Y3Z3 626 aaKnown RBP5.15□□□□□ -1.59
VCAN-207ENST00000507162 IGKV3-7A0A075B6H7 116 aa5.14□□□□□ -1.59
VCAN-207ENST00000507162 A0A1B0GW64 132 aa5.14□□□□□ -1.59
VCAN-207ENST00000507162 A0A1W2PQL4 384 aaPredicted RBP5.14□□□□□ -1.59
VCAN-207ENST00000507162 FAM90A7PA6NKC0 464 aa5.14□□□□□ -1.59
VCAN-207ENST00000507162 C15orf61A6NNL5 157 aa5.14□□□□□ -1.59
VCAN-207ENST00000507162 CLEC3BP05452 202 aa5.14□□□□□ -1.59
VCAN-207ENST00000507162 GSTT2P0CG29 244 aa5.14□□□□□ -1.59
VCAN-207ENST00000507162 GSTT2BP0CG30 244 aa5.14□□□□□ -1.59
VCAN-207ENST00000507162 MYOD1P15172 320 aa5.14□□□□□ -1.59
VCAN-207ENST00000507162 ELLP55199 621 aaPredicted RBP5.14□□□□□ -1.59
VCAN-207ENST00000507162 CMC4P56277 68 aaPredicted RBP5.14□□□□□ -1.59
VCAN-207ENST00000507162 RBM11P57052 281 aaKnown RBP5.14□□□□□ -1.59
VCAN-207ENST00000507162 PSME3P61289 254 aa5.14□□□□□ -1.59
VCAN-207ENST00000507162 CDK5Q00535 292 aa5.14□□□□□ -1.59
VCAN-207ENST00000507162 DMKNQ6E0U4 476 aaPredicted RBP5.14□□□□□ -1.59
VCAN-207ENST00000507162 FAM71F2Q6NXP2 309 aa5.14□□□□□ -1.59
VCAN-207ENST00000507162 TRAT1Q6PIZ9 186 aa5.14□□□□□ -1.59
VCAN-207ENST00000507162 OR51A4Q8NGJ6 313 aa5.14□□□□□ -1.59
VCAN-207ENST00000507162 OR5D14Q8NGL3 314 aa5.14□□□□□ -1.59
VCAN-207ENST00000507162 IL1F10Q8WWZ1 152 aa5.14□□□□□ -1.59
VCAN-207ENST00000507162 EDARADDQ8WWZ3 215 aa5.14□□□□□ -1.59
VCAN-207ENST00000507162 ACOT12Q8WYK0 555 aa5.14□□□□□ -1.59
VCAN-207ENST00000507162 GALMQ96C23 342 aa5.14□□□□□ -1.59
VCAN-207ENST00000507162 NSMCE2Q96MF7 247 aa5.14□□□□□ -1.59
VCAN-207ENST00000507162 METTL9Q9H1A3 318 aa5.14□□□□□ -1.59
VCAN-207ENST00000507162 REEP1Q9H902 201 aa5.14□□□□□ -1.59
VCAN-207ENST00000507162 EFCAB1Q9HAE3 211 aa5.14□□□□□ -1.59
VCAN-207ENST00000507162 MRGBPQ9NV56 204 aa5.14□□□□□ -1.59
VCAN-207ENST00000507162 STEAP1Q9UHE8 339 aa5.14□□□□□ -1.59
VCAN-207ENST00000507162 GNG8Q9UK08 70 aa5.14□□□□□ -1.59
VCAN-207ENST00000507162 UBE2QL1A1L167 161 aa5.13□□□□□ -1.59
VCAN-207ENST00000507162 GABRPO00591 440 aa5.13□□□□□ -1.59
VCAN-207ENST00000507162 IGLV2-23P01705 113 aa5.13□□□□□ -1.59
VCAN-207ENST00000507162 APOA2P02652 100 aa5.13□□□□□ -1.59
VCAN-207ENST00000507162 CRYGBP07316 175 aa5.13□□□□□ -1.59
VCAN-207ENST00000507162 SERPINA2P20848 420 aa5.13□□□□□ -1.59
VCAN-207ENST00000507162 GALP22466 123 aa5.13□□□□□ -1.59
VCAN-207ENST00000507162 CRISP1P54107 249 aa5.13□□□□□ -1.59
VCAN-207ENST00000507162 HAMPP81172 84 aa5.13□□□□□ -1.59
VCAN-207ENST00000507162 ID3Q02535 119 aa5.13□□□□□ -1.59
VCAN-207ENST00000507162 TP53I3Q53FA7 332 aa5.13□□□□□ -1.59
VCAN-207ENST00000507162 C8orf82Q6P1X6 216 aaPredicted RBP5.13□□□□□ -1.59
VCAN-207ENST00000507162 C19orf35Q6ZS72 473 aa5.13□□□□□ -1.59
VCAN-207ENST00000507162 GBGT1Q8N5D6 347 aa5.13□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms