RNA–Protein interactions for RNA: ENST00000506858.2

SCAMP1-202, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 1 (best)

Gene SCAMP1, Length 1,603 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-202ENST00000506858 ZNF137PP52743 207 aa7.08□□□□□ -1.28
SCAMP1-202ENST00000506858 HES1Q14469 280 aa7.08□□□□□ -1.28
SCAMP1-202ENST00000506858 ZNF846Q147U1 533 aa7.08□□□□□ -1.28
SCAMP1-202ENST00000506858 OR13C8Q8NGS7 320 aa7.08□□□□□ -1.28
SCAMP1-202ENST00000506858 ZNF418Q8TF45 676 aaPredicted RBP7.08□□□□□ -1.28
SCAMP1-202ENST00000506858 S100ZQ8WXG8 99 aa7.08□□□□□ -1.28
SCAMP1-202ENST00000506858 S1PR3Q99500 378 aa7.08□□□□□ -1.28
SCAMP1-202ENST00000506858 KRTAP9-9Q9BYP9 154 aa7.08□□□□□ -1.28
SCAMP1-202ENST00000506858 KRTAP9-4Q9BYQ2 154 aa7.08□□□□□ -1.28
SCAMP1-202ENST00000506858 PRDM13Q9H4Q3 707 aa7.08□□□□□ -1.28
SCAMP1-202ENST00000506858 PIPOXQ9P0Z9 390 aa7.08□□□□□ -1.28
SCAMP1-202ENST00000506858 PLXNB1O43157 2135 aa7.08□□□□□ -1.28
SCAMP1-202ENST00000506858 TENM1Q9UKZ4 2725 aa7.07□□□□□ -1.28
SCAMP1-202ENST00000506858 DISC1C4P0D8 188 aa7.07□□□□□ -1.28
SCAMP1-202ENST00000506858 BRWD1-AS2P59051 145 aa7.07□□□□□ -1.28
SCAMP1-202ENST00000506858 SSBP1Q04837 148 aaKnown RBP7.07□□□□□ -1.28
SCAMP1-202ENST00000506858 ZNF816Q0VGE8 651 aaPredicted RBP7.07□□□□□ -1.28
SCAMP1-202ENST00000506858 ACTBL2Q562R1 376 aa7.07□□□□□ -1.28
SCAMP1-202ENST00000506858 IDO2Q6ZQW0 420 aa7.07□□□□□ -1.28
SCAMP1-202ENST00000506858 Q6ZS46 218 aa7.07□□□□□ -1.28
SCAMP1-202ENST00000506858 LHFPL1Q86WI0 220 aa7.07□□□□□ -1.28
SCAMP1-202ENST00000506858 ZNF645Q8N7E2 425 aa7.07□□□□□ -1.28
SCAMP1-202ENST00000506858 BVESQ8NE79 360 aa7.07□□□□□ -1.28
SCAMP1-202ENST00000506858 OR51H1Q8NH63 302 aa7.07□□□□□ -1.28
SCAMP1-202ENST00000506858 A6NDX4 124 aa7.06□□□□□ -1.28
SCAMP1-202ENST00000506858 H0YJW9 148 aa7.06□□□□□ -1.28
SCAMP1-202ENST00000506858 H7C2Y5 167 aa7.06□□□□□ -1.28
SCAMP1-202ENST00000506858 TCF21O43680 179 aa7.06□□□□□ -1.28
SCAMP1-202ENST00000506858 IGKV1-16P04430 117 aa7.06□□□□□ -1.28
SCAMP1-202ENST00000506858 RPA2P15927 270 aa7.06□□□□□ -1.28
SCAMP1-202ENST00000506858 DUTP33316 252 aaKnown RBP7.06□□□□□ -1.28
SCAMP1-202ENST00000506858 F2RL1P55085 397 aa7.06□□□□□ -1.28
SCAMP1-202ENST00000506858 HILS1P60008 231 aa7.06□□□□□ -1.28
SCAMP1-202ENST00000506858 UBA52P62987 128 aaKnown RBP7.06□□□□□ -1.28
SCAMP1-202ENST00000506858 EIF4EBP1Q13541 118 aaPredicted RBP7.06□□□□□ -1.28
SCAMP1-202ENST00000506858 MEF2DQ14814 521 aa7.06□□□□□ -1.28
SCAMP1-202ENST00000506858 OR8H3Q8N146 312 aa7.06□□□□□ -1.28
SCAMP1-202ENST00000506858 ADAD2Q8NCV1 583 aaKnown RBP7.06□□□□□ -1.28
SCAMP1-202ENST00000506858 TERB2Q8NHR7 220 aa7.06□□□□□ -1.28
SCAMP1-202ENST00000506858 SSMEM1Q8WWF3 244 aa7.06□□□□□ -1.28
SCAMP1-202ENST00000506858 EAF1Q96JC9 268 aaPredicted RBP7.06□□□□□ -1.28
SCAMP1-202ENST00000506858 TBC1D24Q9ULP9 559 aa7.06□□□□□ -1.28
SCAMP1-202ENST00000506858 FLVCR2Q9UPI3 526 aa7.06□□□□□ -1.28
SCAMP1-202ENST00000506858 TCF19Q9Y242 345 aa7.06□□□□□ -1.28
SCAMP1-202ENST00000506858 VSIG4Q9Y279 399 aa7.06□□□□□ -1.28
SCAMP1-202ENST00000506858 ELOA3CA0A087WX78 387 aaPredicted RBP7.05□□□□□ -1.28
SCAMP1-202ENST00000506858 FAM90A9PA6NNJ1 464 aa7.05□□□□□ -1.28
SCAMP1-202ENST00000506858 VGLL3A8MV65 326 aa7.05□□□□□ -1.28
SCAMP1-202ENST00000506858 GPR137BO60478 399 aa7.05□□□□□ -1.28
SCAMP1-202ENST00000506858 FCGR3BO75015 233 aa7.05□□□□□ -1.28
SCAMP1-202ENST00000506858 PGLYRP1O75594 196 aaPredicted RBP7.05□□□□□ -1.28
SCAMP1-202ENST00000506858 UPK1BO75841 260 aa7.05□□□□□ -1.28
SCAMP1-202ENST00000506858 RLN1P04808 185 aa7.05□□□□□ -1.28
SCAMP1-202ENST00000506858 TBPP20226 339 aa7.05□□□□□ -1.28
SCAMP1-202ENST00000506858 BRS3P32247 399 aa7.05□□□□□ -1.28
SCAMP1-202ENST00000506858 BTCP35070 178 aa7.05□□□□□ -1.28
SCAMP1-202ENST00000506858 BLCAPP62952 87 aa7.05□□□□□ -1.28
SCAMP1-202ENST00000506858 TAGLNQ01995 201 aaKnown RBP7.05□□□□□ -1.28
SCAMP1-202ENST00000506858 CCDC144NLQ6NUI1 221 aa7.05□□□□□ -1.28
SCAMP1-202ENST00000506858 LINC00299Q6ZSB3 139 aa7.05□□□□□ -1.28
SCAMP1-202ENST00000506858 ARRDC1Q8N5I2 433 aa7.05□□□□□ -1.28
SCAMP1-202ENST00000506858 TCTEX1D2Q8WW35 142 aa7.05□□□□□ -1.28
SCAMP1-202ENST00000506858 TSC22D3Q99576 134 aa7.05□□□□□ -1.28
SCAMP1-202ENST00000506858 RTBDNQ9BSG5 229 aaPredicted RBP7.05□□□□□ -1.28
SCAMP1-202ENST00000506858 WDR12Q9GZL7 423 aaKnown RBP7.05□□□□□ -1.28
SCAMP1-202ENST00000506858 BEX1Q9HBH7 125 aa7.05□□□□□ -1.28
SCAMP1-202ENST00000506858 SLC35D1Q9NTN3 355 aa7.05□□□□□ -1.28
SCAMP1-202ENST00000506858 PRR13Q9NZ81 148 aa7.05□□□□□ -1.28
SCAMP1-202ENST00000506858 ZNF107Q9UII5 783 aaPredicted RBP7.05□□□□□ -1.28
SCAMP1-202ENST00000506858 SIGLEC9Q9Y336 463 aa7.05□□□□□ -1.28
SCAMP1-202ENST00000506858 STAB1Q9NY15 2570 aa7.05□□□□□ -1.28
SCAMP1-202ENST00000506858 NCBP2LA6PVI3 153 aaKnown RBP7.05□□□□□ -1.28
SCAMP1-202ENST00000506858 SRRM4A7MD48 611 aaKnown RBP7.05□□□□□ -1.28
SCAMP1-202ENST00000506858 OOSP1A8MZH6 123 aa7.05□□□□□ -1.28
SCAMP1-202ENST00000506858 RAMP3O60896 148 aa7.05□□□□□ -1.28
SCAMP1-202ENST00000506858 CRYZL1O95825 349 aa7.05□□□□□ -1.28
SCAMP1-202ENST00000506858 TMEM11P17152 192 aa7.05□□□□□ -1.28
SCAMP1-202ENST00000506858 HABP2Q14520 560 aaPredicted RBP7.05□□□□□ -1.28
SCAMP1-202ENST00000506858 SP6Q3SY56 376 aa7.05□□□□□ -1.28
SCAMP1-202ENST00000506858 HIST2H2BDQ6DRA6 164 aa7.05□□□□□ -1.28
SCAMP1-202ENST00000506858 KCTD9Q7L273 389 aa7.05□□□□□ -1.28
SCAMP1-202ENST00000506858 VKORC1L1Q8N0U8 176 aa7.05□□□□□ -1.28
SCAMP1-202ENST00000506858 OR5AN1Q8NGI8 311 aa7.05□□□□□ -1.28
SCAMP1-202ENST00000506858 DDB2Q92466 427 aa7.05□□□□□ -1.28
SCAMP1-202ENST00000506858 SLC25A33Q9BSK2 321 aa7.05□□□□□ -1.28
SCAMP1-202ENST00000506858 RSRP1Q9BUV0 290 aa7.05□□□□□ -1.28
SCAMP1-202ENST00000506858 CCDC32Q9BV29 185 aa7.05□□□□□ -1.28
SCAMP1-202ENST00000506858 DPAGT1Q9H3H5 408 aa7.05□□□□□ -1.28
SCAMP1-202ENST00000506858 C5orf66Q9H5L9 145 aa7.05□□□□□ -1.28
SCAMP1-202ENST00000506858 PLSCR3Q9NRY6 295 aa7.05□□□□□ -1.28
SCAMP1-202ENST00000506858 VPREB3Q9UKI3 123 aa7.05□□□□□ -1.28
SCAMP1-202ENST00000506858 GAB2Q9UQC2 676 aa7.05□□□□□ -1.28
SCAMP1-202ENST00000506858 TNCP24821 2201 aa7.05□□□□□ -1.28
SCAMP1-202ENST00000506858 BTBD17A6NE02 478 aa7.04□□□□□ -1.28
SCAMP1-202ENST00000506858 GPR31O00270 319 aa7.04□□□□□ -1.28
SCAMP1-202ENST00000506858 LYRM1O43325 122 aa7.04□□□□□ -1.28
SCAMP1-202ENST00000506858 AMY1AP04745 511 aa7.04□□□□□ -1.28
SCAMP1-202ENST00000506858 FAM106CPP0CH98 169 aa7.04□□□□□ -1.28
SCAMP1-202ENST00000506858 VSIG10L2P0DP72 767 aa7.04□□□□□ -1.28
SCAMP1-202ENST00000506858 CD1BP29016 333 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms