RNA–Protein interactions for RNA: ENST00000506409.1

MED28-204, Transcript of mediator complex subunit 28, humanhuman

TSL 2

Gene MED28, Length 347 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED28-204ENST00000506409 G3V318 75 aa12.17□□□□□ -0.46
MED28-204ENST00000506409 SPDEFO95238 335 aa12.17□□□□□ -0.46
MED28-204ENST00000506409 IGLL1P15814 213 aa12.17□□□□□ -0.46
MED28-204ENST00000506409 PSMB8P28062 276 aa12.17□□□□□ -0.46
MED28-204ENST00000506409 THBS3P49746 956 aa12.17□□□□□ -0.46
MED28-204ENST00000506409 CX3CL1P78423 397 aa12.17□□□□□ -0.46
MED28-204ENST00000506409 NDPQ00604 133 aa12.17□□□□□ -0.46
MED28-204ENST00000506409 PSG5Q15238 335 aa12.17□□□□□ -0.46
MED28-204ENST00000506409 ZNF660Q6AZW8 331 aaPredicted RBP12.17□□□□□ -0.46
MED28-204ENST00000506409 CNIH2Q6PI25 160 aa12.17□□□□□ -0.46
MED28-204ENST00000506409 ETV3LQ6ZN32 361 aa12.17□□□□□ -0.46
MED28-204ENST00000506409 C5orf30Q96GV9 206 aa12.17□□□□□ -0.46
MED28-204ENST00000506409 FUNDC2Q9BWH2 189 aa12.17□□□□□ -0.46
MED28-204ENST00000506409 ANXA10Q9UJ72 324 aa12.17□□□□□ -0.46
MED28-204ENST00000506409 TRAV41A0A0B4J266 112 aa12.16□□□□□ -0.46
MED28-204ENST00000506409 J3QRK9 145 aa12.16□□□□□ -0.46
MED28-204ENST00000506409 FCN1O00602 326 aa12.16□□□□□ -0.46
MED28-204ENST00000506409 NFYAP23511 347 aaPredicted RBP12.16□□□□□ -0.46
MED28-204ENST00000506409 PPIFP30405 207 aaKnown RBP12.16□□□□□ -0.46
MED28-204ENST00000506409 CDX1P47902 265 aaPredicted RBP12.16□□□□□ -0.46
MED28-204ENST00000506409 TAGLNQ01995 201 aaKnown RBP12.16□□□□□ -0.46
MED28-204ENST00000506409 CBX3Q13185 183 aa12.16□□□□□ -0.46
MED28-204ENST00000506409 RTL8BQ17RB0 113 aa12.16□□□□□ -0.46
MED28-204ENST00000506409 ECSCRQ19T08 205 aa12.16□□□□□ -0.46
MED28-204ENST00000506409 MRPL41Q8IXM3 137 aaKnown RBP12.16□□□□□ -0.46
MED28-204ENST00000506409 LINC00482Q8N8I6 264 aa12.16□□□□□ -0.46
MED28-204ENST00000506409 ABHD5Q8WTS1 349 aa12.16□□□□□ -0.46
MED28-204ENST00000506409 CLCC1Q96S66 551 aa12.16□□□□□ -0.46
MED28-204ENST00000506409 AUNIPQ9H7T9 357 aa12.16□□□□□ -0.46
MED28-204ENST00000506409 OR2W1Q9Y3N9 320 aa12.16□□□□□ -0.46
MED28-204ENST00000506409 SLC25A17O43808 307 aa12.15□□□□□ -0.46
MED28-204ENST00000506409 MYCNOSP40205 109 aa12.15□□□□□ -0.46
MED28-204ENST00000506409 LUMP51884 338 aaPredicted RBP12.15□□□□□ -0.46
MED28-204ENST00000506409 ARPC4P59998 168 aa12.15□□□□□ -0.46
MED28-204ENST00000506409 NCS1P62166 190 aa12.15□□□□□ -0.46
MED28-204ENST00000506409 UBE2NLQ5JXB2 153 aa12.15□□□□□ -0.46
MED28-204ENST00000506409 TMEM65Q6PI78 240 aa12.15□□□□□ -0.46
MED28-204ENST00000506409 ZNF645Q8N7E2 425 aa12.15□□□□□ -0.46
MED28-204ENST00000506409 SAMD12Q8N8I0 201 aa12.15□□□□□ -0.46
MED28-204ENST00000506409 BEST4Q8NFU0 473 aa12.15□□□□□ -0.46
MED28-204ENST00000506409 OR13F1Q8NGS4 319 aa12.15□□□□□ -0.46
MED28-204ENST00000506409 SLC25A46Q96AG3 418 aa12.15□□□□□ -0.46
MED28-204ENST00000506409 S100A16Q96FQ6 103 aaKnown RBP12.15□□□□□ -0.46
MED28-204ENST00000506409 RCC1LQ96I51 464 aaKnown RBP12.15□□□□□ -0.46
MED28-204ENST00000506409 ADTRPQ96IZ2 230 aa12.15□□□□□ -0.46
MED28-204ENST00000506409 FBXO7Q9Y3I1 522 aa12.15□□□□□ -0.46
MED28-204ENST00000506409 A3GALT2U3KPV4 340 aa12.15□□□□□ -0.46
MED28-204ENST00000506409 XRCC3O43542 346 aa12.14□□□□□ -0.47
MED28-204ENST00000506409 DUS4LO95620 317 aaKnown RBP12.14□□□□□ -0.47
MED28-204ENST00000506409 CA2P00918 260 aa12.14□□□□□ -0.47
MED28-204ENST00000506409 HLA-DQB1P01920 261 aa12.14□□□□□ -0.47
MED28-204ENST00000506409 SMIM18P0DKX4 95 aa12.14□□□□□ -0.47
MED28-204ENST00000506409 RRASP10301 218 aa12.14□□□□□ -0.47
MED28-204ENST00000506409 DUTP33316 252 aaKnown RBP12.14□□□□□ -0.47
MED28-204ENST00000506409 LGALS7P47929 136 aa12.14□□□□□ -0.47
MED28-204ENST00000506409 CRIP2P52943 208 aaPredicted RBP12.14□□□□□ -0.47
MED28-204ENST00000506409 VBP1P61758 197 aa12.14□□□□□ -0.47
MED28-204ENST00000506409 ZNF562Q6V9R5 426 aa12.14□□□□□ -0.47
MED28-204ENST00000506409 HOGA1Q86XE5 327 aa12.14□□□□□ -0.47
MED28-204ENST00000506409 GVQW1Q8N7I0 195 aa12.14□□□□□ -0.47
MED28-204ENST00000506409 MINDY2Q8NBR6 621 aa12.14□□□□□ -0.47
MED28-204ENST00000506409 BVESQ8NE79 360 aa12.14□□□□□ -0.47
MED28-204ENST00000506409 KCTD12Q96CX2 325 aaKnown RBP12.14□□□□□ -0.47
MED28-204ENST00000506409 RAX2Q96IS3 184 aa12.14□□□□□ -0.47
MED28-204ENST00000506409 HARBI1Q96MB7 349 aa12.14□□□□□ -0.47
MED28-204ENST00000506409 DUX3Q96PT4 197 aa12.14□□□□□ -0.47
MED28-204ENST00000506409 P2RX4Q99571 388 aa12.14□□□□□ -0.47
MED28-204ENST00000506409 KLK15Q9H2R5 256 aa12.14□□□□□ -0.47
MED28-204ENST00000506409 TPSG1Q9NRR2 321 aa12.14□□□□□ -0.47
MED28-204ENST00000506409 A0A1W2PN81 502 aa12.13□□□□□ -0.47
MED28-204ENST00000506409 CCL24O00175 119 aa12.13□□□□□ -0.47
MED28-204ENST00000506409 SHOXO15266 292 aa12.13□□□□□ -0.47
MED28-204ENST00000506409 SLC22A5O76082 557 aa12.13□□□□□ -0.47
MED28-204ENST00000506409 IGLV1-40P01703 118 aa12.13□□□□□ -0.47
MED28-204ENST00000506409 IGLV2-23P01705 113 aa12.13□□□□□ -0.47
MED28-204ENST00000506409 PRB2P02812 416 aaPredicted RBP12.13□□□□□ -0.47
MED28-204ENST00000506409 PTHLHP12272 177 aa12.13□□□□□ -0.47
MED28-204ENST00000506409 CHRNA7P36544 502 aa12.13□□□□□ -0.47
MED28-204ENST00000506409 TMEM267Q0VDI3 215 aaPredicted RBP12.13□□□□□ -0.47
MED28-204ENST00000506409 DEFB136Q30KP8 78 aa12.13□□□□□ -0.47
MED28-204ENST00000506409 TMEM177Q53S58 311 aa12.13□□□□□ -0.47
MED28-204ENST00000506409 TMEM69Q5SWH9 247 aa12.13□□□□□ -0.47
MED28-204ENST00000506409 PPP1R27Q86WC6 154 aa12.13□□□□□ -0.47
MED28-204ENST00000506409 TCTEX1D1Q8N7M0 179 aa12.13□□□□□ -0.47
MED28-204ENST00000506409 MYOZ3Q8TDC0 251 aa12.13□□□□□ -0.47
MED28-204ENST00000506409 C4orf3Q8WVX3 66 aa12.13□□□□□ -0.47
MED28-204ENST00000506409 DDB2Q92466 427 aa12.13□□□□□ -0.47
MED28-204ENST00000506409 FAM103A1Q9BTL3 118 aaKnown RBP12.13□□□□□ -0.47
MED28-204ENST00000506409 FOXA2Q9Y261 457 aaPredicted RBP12.13□□□□□ -0.47
MED28-204ENST00000506409 IGKV1D-13A0A0B4J2D9 117 aa12.12□□□□□ -0.47
MED28-204ENST00000506409 LINC00473A8K010 186 aa12.12□□□□□ -0.47
MED28-204ENST00000506409 TUSC2O75896 110 aa12.12□□□□□ -0.47
MED28-204ENST00000506409 CRYZL1O95825 349 aa12.12□□□□□ -0.47
MED28-204ENST00000506409 FCER2P06734 321 aa12.12□□□□□ -0.47
MED28-204ENST00000506409 IGKV1-13P0DP09 117 aa12.12□□□□□ -0.47
MED28-204ENST00000506409 EGR2P11161 476 aaPredicted RBP12.12□□□□□ -0.47
MED28-204ENST00000506409 CBX5P45973 191 aa12.12□□□□□ -0.47
MED28-204ENST00000506409 RAB25P57735 213 aa12.12□□□□□ -0.47
MED28-204ENST00000506409 C19orf54Q5BKX5 351 aa12.12□□□□□ -0.47
MED28-204ENST00000506409 FOXB2Q5VYV0 432 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms