RNA–Protein interactions for RNA: ENST00000504951.6

GYPB-204, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 632 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-204ENST00000504951 DEFB125Q8N687 156 aa4.49□□□□□ -1.69
GYPB-204ENST00000504951 GVQW1Q8N7I0 195 aa4.49□□□□□ -1.69
GYPB-204ENST00000504951 ZNF485Q8NCK3 441 aa4.49□□□□□ -1.69
GYPB-204ENST00000504951 PHLDA1Q8WV24 401 aaPredicted RBP4.49□□□□□ -1.69
GYPB-204ENST00000504951 FAM46BQ96A09 425 aa4.49□□□□□ -1.69
GYPB-204ENST00000504951 SMIM19Q96E16 107 aa4.49□□□□□ -1.69
GYPB-204ENST00000504951 USMG5Q96IX5 58 aa4.49□□□□□ -1.69
GYPB-204ENST00000504951 C20orf173Q96LM9 149 aa4.49□□□□□ -1.69
GYPB-204ENST00000504951 Q96M66 194 aa4.49□□□□□ -1.69
GYPB-204ENST00000504951 Q96MT0 163 aa4.49□□□□□ -1.69
GYPB-204ENST00000504951 RDH12Q96NR8 316 aa4.49□□□□□ -1.69
GYPB-204ENST00000504951 MS4A10Q96PG2 267 aa4.49□□□□□ -1.69
GYPB-204ENST00000504951 OR14A2Q96R54 314 aa4.49□□□□□ -1.69
GYPB-204ENST00000504951 S100A13Q99584 98 aa4.49□□□□□ -1.69
GYPB-204ENST00000504951 SULT4A1Q9BR01 284 aa4.49□□□□□ -1.69
GYPB-204ENST00000504951 ABHD14AQ9BUJ0 271 aa4.49□□□□□ -1.69
GYPB-204ENST00000504951 GGTLC1Q9BX51 225 aa4.49□□□□□ -1.69
GYPB-204ENST00000504951 SELENOIQ9C0D9 397 aa4.49□□□□□ -1.69
GYPB-204ENST00000504951 FBXL15Q9H469 300 aa4.49□□□□□ -1.69
GYPB-204ENST00000504951 SRD5A3Q9H8P0 318 aa4.49□□□□□ -1.69
GYPB-204ENST00000504951 PLEKHA3Q9HB20 300 aa4.49□□□□□ -1.69
GYPB-204ENST00000504951 PAK1IP1Q9NWT1 392 aaPredicted RBP4.49□□□□□ -1.69
GYPB-204ENST00000504951 BABAM2Q9NXR7 383 aa4.49□□□□□ -1.69
GYPB-204ENST00000504951 PEF1Q9UBV8 284 aaKnown RBP4.49□□□□□ -1.69
GYPB-204ENST00000504951 RPL36Q9Y3U8 105 aaKnown RBP4.49□□□□□ -1.69
GYPB-204ENST00000504951 ABCA13Q86UQ4 5058 aa4.48□□□□□ -1.69
GYPB-204ENST00000504951 LOC102724200A0A096LPH7 203 aaPredicted RBP4.48□□□□□ -1.69
GYPB-204ENST00000504951 KIR2DL5BA0A0G2JN68 375 aa4.48□□□□□ -1.69
GYPB-204ENST00000504951 KIR2DL5BA0A0G2JPC4 375 aa4.48□□□□□ -1.69
GYPB-204ENST00000504951 A0A0J9YWU9 116 aa4.48□□□□□ -1.69
GYPB-204ENST00000504951 PNMA8CA0A1B0GUJ8 204 aa4.48□□□□□ -1.69
GYPB-204ENST00000504951 RRHO14718 337 aa4.48□□□□□ -1.69
GYPB-204ENST00000504951 YPEL1O60688 119 aa4.48□□□□□ -1.69
GYPB-204ENST00000504951 CRTAPO75718 401 aaPredicted RBP4.48□□□□□ -1.69
GYPB-204ENST00000504951 CIB2O75838 187 aa4.48□□□□□ -1.69
GYPB-204ENST00000504951 CDK2AP2O75956 126 aa4.48□□□□□ -1.69
GYPB-204ENST00000504951 CD7P09564 240 aa4.48□□□□□ -1.69
GYPB-204ENST00000504951 FUT3P21217 361 aa4.48□□□□□ -1.69
GYPB-204ENST00000504951 RASSF2P50749 326 aa4.48□□□□□ -1.69
GYPB-204ENST00000504951 SYNJ2BPP57105 145 aa4.48□□□□□ -1.69
GYPB-204ENST00000504951 TPPP2P59282 170 aa4.48□□□□□ -1.69
GYPB-204ENST00000504951 SSBP2P81877 361 aaPredicted RBP4.48□□□□□ -1.69
GYPB-204ENST00000504951 EWSR1Q01844 656 aaKnown RBP eCLIP4.48□□□□□ -1.69
GYPB-204ENST00000504951 GPR176Q14439 515 aa4.48□□□□□ -1.69
GYPB-204ENST00000504951 INSL4Q14641 139 aa4.48□□□□□ -1.69
GYPB-204ENST00000504951 ANKRD55Q3KP44 614 aa4.48□□□□□ -1.69
GYPB-204ENST00000504951 CD300EQ496F6 205 aaPredicted RBP4.48□□□□□ -1.69
GYPB-204ENST00000504951 Q499Y3 187 aa4.48□□□□□ -1.69
GYPB-204ENST00000504951 TRAT1Q6PIZ9 186 aa4.48□□□□□ -1.69
GYPB-204ENST00000504951 PPP1R27Q86WC6 154 aa4.48□□□□□ -1.69
GYPB-204ENST00000504951 KIR2DL5AQ8N109 375 aa4.48□□□□□ -1.69
GYPB-204ENST00000504951 POC5Q8NA72 575 aa4.48□□□□□ -1.69
GYPB-204ENST00000504951 DRAXINQ8NBI3 349 aaPredicted RBP4.48□□□□□ -1.69
GYPB-204ENST00000504951 KIR2DL5BQ8NHK3 375 aa4.48□□□□□ -1.69
GYPB-204ENST00000504951 MRPS24Q96EL2 167 aaKnown RBP4.48□□□□□ -1.69
GYPB-204ENST00000504951 ABHD14BQ96IU4 210 aa4.48□□□□□ -1.69
GYPB-204ENST00000504951 DERL3Q96Q80 235 aa4.48□□□□□ -1.69
GYPB-204ENST00000504951 YPEL2Q96QA6 119 aa4.48□□□□□ -1.69
GYPB-204ENST00000504951 FAAP24Q9BTP7 215 aa4.48□□□□□ -1.69
GYPB-204ENST00000504951 KCNK15Q9H427 330 aa4.48□□□□□ -1.69
GYPB-204ENST00000504951 SPACA1Q9HBV2 294 aa4.48□□□□□ -1.69
GYPB-204ENST00000504951 FBXL7Q9UJT9 491 aa4.48□□□□□ -1.69
GYPB-204ENST00000504951 JPT1Q9UK76 154 aa4.48□□□□□ -1.69
GYPB-204ENST00000504951 ADAM30Q9UKF2 790 aa4.48□□□□□ -1.69
GYPB-204ENST00000504951 C13orf42A0A1B0GVH6 325 aa4.47□□□□□ -1.69
GYPB-204ENST00000504951 H0YJW9 148 aa4.47□□□□□ -1.69
GYPB-204ENST00000504951 LGALS9O00182 355 aa4.47□□□□□ -1.69
GYPB-204ENST00000504951 SPRY2O43597 315 aa4.47□□□□□ -1.69
GYPB-204ENST00000504951 PDCD6O75340 191 aa4.47□□□□□ -1.69
GYPB-204ENST00000504951 CA11O75493 328 aa4.47□□□□□ -1.69
GYPB-204ENST00000504951 RBMXL2O75526 392 aaKnown RBP4.47□□□□□ -1.69
GYPB-204ENST00000504951 ATP5HO75947 161 aa4.47□□□□□ -1.69
GYPB-204ENST00000504951 TRGV3P03979 118 aa4.47□□□□□ -1.69
GYPB-204ENST00000504951 DCKP27707 260 aa4.47□□□□□ -1.69
GYPB-204ENST00000504951 HTR2CP28335 458 aa4.47□□□□□ -1.69
GYPB-204ENST00000504951 MC5RP33032 325 aa4.47□□□□□ -1.69
GYPB-204ENST00000504951 HTD2P86397 168 aa4.47□□□□□ -1.69
GYPB-204ENST00000504951 DEFA5Q01523 94 aa4.47□□□□□ -1.69
GYPB-204ENST00000504951 PMS2P11Q13670 270 aa4.47□□□□□ -1.69
GYPB-204ENST00000504951 HMGN3Q15651 99 aa4.47□□□□□ -1.69
GYPB-204ENST00000504951 YIF1BQ5BJH7 314 aa4.47□□□□□ -1.69
GYPB-204ENST00000504951 LAIR2Q6ISS4 152 aa4.47□□□□□ -1.69
GYPB-204ENST00000504951 UNQ5815/PRO19632Q6UWF5 114 aa4.47□□□□□ -1.69
GYPB-204ENST00000504951 TMPRSS11AQ6ZMR5 421 aa4.47□□□□□ -1.69
GYPB-204ENST00000504951 SLC16A13Q7RTY0 426 aa4.47□□□□□ -1.69
GYPB-204ENST00000504951 C6orf201Q7Z4U5 140 aa4.47□□□□□ -1.69
GYPB-204ENST00000504951 LFNGQ8NES3 379 aa4.47□□□□□ -1.69
GYPB-204ENST00000504951 OR2AK2Q8NG84 335 aa4.47□□□□□ -1.69
GYPB-204ENST00000504951 ABHD5Q8WTS1 349 aa4.47□□□□□ -1.69
GYPB-204ENST00000504951 IL1F10Q8WWZ1 152 aa4.47□□□□□ -1.69
GYPB-204ENST00000504951 SNAPC3Q92966 411 aa4.47□□□□□ -1.69
GYPB-204ENST00000504951 RNF183Q96D59 192 aa4.47□□□□□ -1.69
GYPB-204ENST00000504951 CLCC1Q96S66 551 aa4.47□□□□□ -1.69
GYPB-204ENST00000504951 MYCBPQ99417 103 aaPredicted RBP4.47□□□□□ -1.69
GYPB-204ENST00000504951 AGMATQ9BSE5 352 aa4.47□□□□□ -1.69
GYPB-204ENST00000504951 NICN1Q9BSH3 213 aa4.47□□□□□ -1.69
GYPB-204ENST00000504951 C9orf16Q9BUW7 83 aa4.47□□□□□ -1.69
GYPB-204ENST00000504951 MFFQ9GZY8 342 aa4.47□□□□□ -1.69
GYPB-204ENST00000504951 KCNIP1Q9NZI2 227 aa4.47□□□□□ -1.69
GYPB-204ENST00000504951 CKLFQ9UBR5 152 aa4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms