RNA–Protein interactions for RNA: ENST00000504761.6

TCOF1-207, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TCOF1, Length 4,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-207ENST00000504761 TRAV24A0A0B4J272 114 aa11.9□□□□□ -0.5
TCOF1-207ENST00000504761 IGKV1D-13A0A0B4J2D9 117 aa11.9□□□□□ -0.5
TCOF1-207ENST00000504761 A0A1W2PN81 502 aa11.9□□□□□ -0.5
TCOF1-207ENST00000504761 LEUTXA8MZ59 168 aa11.9□□□□□ -0.5
TCOF1-207ENST00000504761 B3GALNT1O75752 331 aa11.9□□□□□ -0.5
TCOF1-207ENST00000504761 IGKV1-13P0DP09 117 aa11.9□□□□□ -0.5
TCOF1-207ENST00000504761 SELLP14151 372 aa11.9□□□□□ -0.5
TCOF1-207ENST00000504761 OTX1P32242 354 aaPredicted RBP11.9□□□□□ -0.5
TCOF1-207ENST00000504761 CHRNA7P36544 502 aa11.9□□□□□ -0.5
TCOF1-207ENST00000504761 FLI1Q01543 452 aaPredicted RBP11.9□□□□□ -0.5
TCOF1-207ENST00000504761 BORCS7Q96B45 105 aa11.9□□□□□ -0.5
TCOF1-207ENST00000504761 TMUB1Q9BVT8 246 aa11.9□□□□□ -0.5
TCOF1-207ENST00000504761 CDC34P49427 236 aaPredicted RBP11.9□□□□□ -0.5
TCOF1-207ENST00000504761 FBLN5Q9UBX5 448 aa11.9□□□□□ -0.5
TCOF1-207ENST00000504761 MARCH11A6NNE9 402 aa11.9□□□□□ -0.5
TCOF1-207ENST00000504761 C17orf100A8MU93 164 aa11.9□□□□□ -0.5
TCOF1-207ENST00000504761 ZG16O60844 167 aa11.9□□□□□ -0.5
TCOF1-207ENST00000504761 IGHG3P01860 377 aa11.9□□□□□ -0.5
TCOF1-207ENST00000504761 FAM166AQ6J272 317 aa11.9□□□□□ -0.5
TCOF1-207ENST00000504761 GCSAMQ8N6F7 178 aa11.9□□□□□ -0.5
TCOF1-207ENST00000504761 MRPL30Q8TCC3 161 aaKnown RBP11.9□□□□□ -0.5
TCOF1-207ENST00000504761 IDI2-AS1Q9NZ38 188 aa11.9□□□□□ -0.5
TCOF1-207ENST00000504761 PPIAL4CA0A0B4J2A2 164 aa11.9□□□□□ -0.51
TCOF1-207ENST00000504761 MSGN1A6NI15 193 aa11.9□□□□□ -0.51
TCOF1-207ENST00000504761 PPIAL4GP0DN37 164 aa11.9□□□□□ -0.51
TCOF1-207ENST00000504761 NPBWR1P48145 328 aa11.9□□□□□ -0.51
TCOF1-207ENST00000504761 SLC35E4Q6ICL7 350 aa11.9□□□□□ -0.51
TCOF1-207ENST00000504761 C15orf54Q8N8G6 183 aa11.9□□□□□ -0.51
TCOF1-207ENST00000504761 OR13D1Q8NGV5 346 aa11.9□□□□□ -0.51
TCOF1-207ENST00000504761 NEIL1Q96FI4 390 aaPredicted RBP11.9□□□□□ -0.51
TCOF1-207ENST00000504761 MALRD1Q5VYJ5 2156 aa11.9□□□□□ -0.51
TCOF1-207ENST00000504761 TIMP3P35625 211 aa11.89□□□□□ -0.51
TCOF1-207ENST00000504761 ZNF345Q14585 488 aa11.89□□□□□ -0.51
TCOF1-207ENST00000504761 SEBOXQ9HB31 216 aaPredicted RBP11.89□□□□□ -0.51
TCOF1-207ENST00000504761 F12P00748 615 aaPredicted RBP11.89□□□□□ -0.51
TCOF1-207ENST00000504761 TIGITQ495A1 244 aa11.89□□□□□ -0.51
TCOF1-207ENST00000504761 ZNF474Q6S9Z5 364 aaPredicted RBP11.89□□□□□ -0.51
TCOF1-207ENST00000504761 PRNDQ9UKY0 176 aa11.89□□□□□ -0.51
TCOF1-207ENST00000504761 OR51B2Q9Y5P1 312 aa11.89□□□□□ -0.51
TCOF1-207ENST00000504761 MMP24Q9Y5R2 645 aa11.89□□□□□ -0.51
TCOF1-207ENST00000504761 ARG1P05089 322 aa11.89□□□□□ -0.51
TCOF1-207ENST00000504761 CLEC3BP05452 202 aa11.89□□□□□ -0.51
TCOF1-207ENST00000504761 NMBP08949 121 aa11.89□□□□□ -0.51
TCOF1-207ENST00000504761 DAOP14920 347 aa11.89□□□□□ -0.51
TCOF1-207ENST00000504761 DVL1P1P54792 670 aaPredicted RBP11.89□□□□□ -0.51
TCOF1-207ENST00000504761 ABHD12Q8N2K0 398 aa11.89□□□□□ -0.51
TCOF1-207ENST00000504761 HIF1ANQ9NWT6 349 aa11.89□□□□□ -0.51
TCOF1-207ENST00000504761 A0A0G2JNJ9 132 aa11.88□□□□□ -0.51
TCOF1-207ENST00000504761 TRIM77I1YAP6 450 aa11.88□□□□□ -0.51
TCOF1-207ENST00000504761 F2RL2O00254 374 aa11.88□□□□□ -0.51
TCOF1-207ENST00000504761 SLC25A17O43808 307 aa11.88□□□□□ -0.51
TCOF1-207ENST00000504761 HCP5Q6MZN7 132 aa11.88□□□□□ -0.51
TCOF1-207ENST00000504761 ZNF66Q6ZN08 573 aa11.88□□□□□ -0.51
TCOF1-207ENST00000504761 ZNF429Q86V71 674 aa11.88□□□□□ -0.51
TCOF1-207ENST00000504761 BLNKQ8WV28 456 aa11.88□□□□□ -0.51
TCOF1-207ENST00000504761 GTF3AQ92664 365 aaKnown RBP11.88□□□□□ -0.51
TCOF1-207ENST00000504761 SH2D2AQ9NP31 389 aa11.88□□□□□ -0.51
TCOF1-207ENST00000504761 Q9UFV3 132 aa11.88□□□□□ -0.51
TCOF1-207ENST00000504761 MYO18BQ8IUG5 2567 aa11.88□□□□□ -0.51
TCOF1-207ENST00000504761 ZNF737O75373 536 aa11.88□□□□□ -0.51
TCOF1-207ENST00000504761 SRSF10O75494 262 aaKnown RBP11.88□□□□□ -0.51
TCOF1-207ENST00000504761 ZNF735P0CB33 412 aa11.88□□□□□ -0.51
TCOF1-207ENST00000504761 C4orf17Q53FE4 359 aa11.88□□□□□ -0.51
TCOF1-207ENST00000504761 FAM78BQ5VT40 261 aa11.88□□□□□ -0.51
TCOF1-207ENST00000504761 OR1L8Q8NGR8 309 aa11.88□□□□□ -0.51
TCOF1-207ENST00000504761 LDLRAD4O15165 306 aa11.88□□□□□ -0.51
TCOF1-207ENST00000504761 IGHV3-48P01763 117 aa11.88□□□□□ -0.51
TCOF1-207ENST00000504761 HKR1P10072 659 aa11.88□□□□□ -0.51
TCOF1-207ENST00000504761 MUC1P15941 1255 aaPredicted RBP11.88□□□□□ -0.51
TCOF1-207ENST00000504761 CCL3L1P16619 93 aa11.88□□□□□ -0.51
TCOF1-207ENST00000504761 CDKN1AP38936 164 aa11.88□□□□□ -0.51
TCOF1-207ENST00000504761 SSX2Q16385 188 aa11.88□□□□□ -0.51
TCOF1-207ENST00000504761 ZNF561Q8N587 486 aa11.88□□□□□ -0.51
TCOF1-207ENST00000504761 VKORC1Q9BQB6 163 aa11.88□□□□□ -0.51
TCOF1-207ENST00000504761 MS4A7Q9GZW8 240 aaPredicted RBP11.88□□□□□ -0.51
TCOF1-207ENST00000504761 DUXBA0A1W2PPF3 345 aa11.88□□□□□ -0.51
TCOF1-207ENST00000504761 A0A1W2PPQ1 181 aa11.88□□□□□ -0.51
TCOF1-207ENST00000504761 IFNL4K9M1U5 179 aa11.88□□□□□ -0.51
TCOF1-207ENST00000504761 UCP3P55916 312 aa11.88□□□□□ -0.51
TCOF1-207ENST00000504761 ATP6V1FQ16864 119 aa11.88□□□□□ -0.51
TCOF1-207ENST00000504761 NRIP2Q9BQI9 281 aa11.88□□□□□ -0.51
TCOF1-207ENST00000504761 MSRB2Q9Y3D2 182 aa11.88□□□□□ -0.51
TCOF1-207ENST00000504761 CHD8Q9HCK8 2581 aa11.87□□□□□ -0.51
TCOF1-207ENST00000504761 BRS3P32247 399 aa11.87□□□□□ -0.51
TCOF1-207ENST00000504761 NBL1P41271 181 aa11.87□□□□□ -0.51
TCOF1-207ENST00000504761 MYPOPQ86VE0 399 aaPredicted RBP11.87□□□□□ -0.51
TCOF1-207ENST00000504761 SAT2Q96F10 170 aaPredicted RBP11.87□□□□□ -0.51
TCOF1-207ENST00000504761 WFIKKN1Q96NZ8 548 aa11.87□□□□□ -0.51
TCOF1-207ENST00000504761 CABLES2Q9BTV7 478 aa11.87□□□□□ -0.51
TCOF1-207ENST00000504761 TMEM140Q9NV12 185 aa11.87□□□□□ -0.51
TCOF1-207ENST00000504761 JPT1Q9UK76 154 aa11.87□□□□□ -0.51
TCOF1-207ENST00000504761 ATP5J2P56134 94 aa11.87□□□□□ -0.51
TCOF1-207ENST00000504761 RBKSQ9H477 322 aa11.87□□□□□ -0.51
TCOF1-207ENST00000504761 SLC25A15Q9Y619 301 aa11.87□□□□□ -0.51
TCOF1-207ENST00000504761 NDUFA6P56556 154 aa11.87□□□□□ -0.51
TCOF1-207ENST00000504761 LYZP61626 148 aa11.87□□□□□ -0.51
TCOF1-207ENST00000504761 HIST1H3AP68431 136 aa11.87□□□□□ -0.51
TCOF1-207ENST00000504761 CLEC2AQ6UVW9 174 aa11.87□□□□□ -0.51
TCOF1-207ENST00000504761 ZNF596Q8TC21 504 aa11.87□□□□□ -0.51
TCOF1-207ENST00000504761 SLC35B3Q9H1N7 401 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms