RNA–Protein interactions for RNA: ENST00000504387.5

NEDD9-208, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene NEDD9, Length 3,211 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-208ENST00000504387 TMEM211Q6ICI0 200 aa6.45□□□□□ -1.38
NEDD9-208ENST00000504387 RHBDD2Q6NTF9 364 aa6.45□□□□□ -1.38
NEDD9-208ENST00000504387 MRPL54Q6P161 138 aaKnown RBP6.45□□□□□ -1.38
NEDD9-208ENST00000504387 SAXO1Q8IYX7 474 aa6.45□□□□□ -1.38
NEDD9-208ENST00000504387 FGFRL1Q8N441 504 aa6.45□□□□□ -1.38
NEDD9-208ENST00000504387 SIGLECL1Q8N7X8 197 aa6.45□□□□□ -1.38
NEDD9-208ENST00000504387 RAB40CQ96S21 281 aa6.45□□□□□ -1.38
NEDD9-208ENST00000504387 MRPL18Q9H0U6 180 aaKnown RBP6.45□□□□□ -1.38
NEDD9-208ENST00000504387 ASCL3Q9NQ33 180 aa6.45□□□□□ -1.38
NEDD9-208ENST00000504387 SERTAD4Q9NUC0 356 aa6.45□□□□□ -1.38
NEDD9-208ENST00000504387 CFAP47Q6ZTR5 3102 aa6.45□□□□□ -1.38
NEDD9-208ENST00000504387 SCO2A0A1W2PP80 73 aa6.45□□□□□ -1.38
NEDD9-208ENST00000504387 A0A1W2PQM1 296 aa6.45□□□□□ -1.38
NEDD9-208ENST00000504387 GDF1P27539 372 aa6.45□□□□□ -1.38
NEDD9-208ENST00000504387 LHX2P50458 406 aa6.45□□□□□ -1.38
NEDD9-208ENST00000504387 TCTAP57738 103 aa6.45□□□□□ -1.38
NEDD9-208ENST00000504387 TPPP2P59282 170 aa6.45□□□□□ -1.38
NEDD9-208ENST00000504387 TRIM61Q5EBN2 209 aa6.45□□□□□ -1.38
NEDD9-208ENST00000504387 LINC01551Q86U37 167 aa6.45□□□□□ -1.38
NEDD9-208ENST00000504387 CISD2Q8N5K1 135 aaKnown RBP6.45□□□□□ -1.38
NEDD9-208ENST00000504387 NHLRC2Q8NBF2 726 aa6.45□□□□□ -1.38
NEDD9-208ENST00000504387 OR8G5Q8NG78 346 aa6.45□□□□□ -1.38
NEDD9-208ENST00000504387 MBD3L1Q8WWY6 194 aa6.45□□□□□ -1.38
NEDD9-208ENST00000504387 APH1AQ96BI3 265 aa6.45□□□□□ -1.38
NEDD9-208ENST00000504387 STARD4Q96DR4 205 aa6.45□□□□□ -1.38
NEDD9-208ENST00000504387 UHRF2Q96PU4 802 aa6.45□□□□□ -1.38
NEDD9-208ENST00000504387 FBXL7Q9UJT9 491 aa6.45□□□□□ -1.38
NEDD9-208ENST00000504387 TP53TG3Q9ULZ0 132 aa6.45□□□□□ -1.38
NEDD9-208ENST00000504387 KIR2DL5BA0A0G2JN68 375 aa6.44□□□□□ -1.38
NEDD9-208ENST00000504387 KIR2DL5BA0A0G2JPC4 375 aa6.44□□□□□ -1.38
NEDD9-208ENST00000504387 HNRNPA3P51991 378 aaKnown RBP6.44□□□□□ -1.38
NEDD9-208ENST00000504387 KRTCAP3Q53RY4 240 aa6.44□□□□□ -1.38
NEDD9-208ENST00000504387 COL5A1-AS1Q5SY13 56 aa6.44□□□□□ -1.38
NEDD9-208ENST00000504387 TPTE2P1Q5T6R2 138 aa6.44□□□□□ -1.38
NEDD9-208ENST00000504387 NUFIP2Q7Z417 695 aaKnown RBP6.44□□□□□ -1.38
NEDD9-208ENST00000504387 RPS19BP1Q86WX3 136 aaKnown RBP6.44□□□□□ -1.38
NEDD9-208ENST00000504387 MKXQ8IYA7 352 aa6.44□□□□□ -1.38
NEDD9-208ENST00000504387 OR8I2Q8N0Y5 310 aa6.44□□□□□ -1.38
NEDD9-208ENST00000504387 KIR2DL5AQ8N109 375 aa6.44□□□□□ -1.38
NEDD9-208ENST00000504387 ZIC4Q8N9L1 334 aa6.44□□□□□ -1.38
NEDD9-208ENST00000504387 WDYHV1Q96HA8 205 aa6.44□□□□□ -1.38
NEDD9-208ENST00000504387 MCRIP2Q9BUT9 160 aaKnown RBP6.44□□□□□ -1.38
NEDD9-208ENST00000504387 FGF23Q9GZV9 251 aaPredicted RBP6.44□□□□□ -1.38
NEDD9-208ENST00000504387 MRPS17Q9Y2R5 130 aaKnown RBP6.44□□□□□ -1.38
NEDD9-208ENST00000504387 TRBV20OR9-2A0A075B6H5 130 aa6.44□□□□□ -1.38
NEDD9-208ENST00000504387 SYNGR3O43761 229 aa6.44□□□□□ -1.38
NEDD9-208ENST00000504387 CA1P00915 261 aaPredicted RBP6.44□□□□□ -1.38
NEDD9-208ENST00000504387 P04436 131 aa6.44□□□□□ -1.38
NEDD9-208ENST00000504387 SRFP11831 508 aa6.44□□□□□ -1.38
NEDD9-208ENST00000504387 CXCL12P48061 93 aa6.44□□□□□ -1.38
NEDD9-208ENST00000504387 SUMO1P63165 101 aaKnown RBP6.44□□□□□ -1.38
NEDD9-208ENST00000504387 SP5Q6BEB4 398 aaPredicted RBP6.44□□□□□ -1.38
NEDD9-208ENST00000504387 MRPL21Q7Z2W9 205 aaKnown RBP6.44□□□□□ -1.38
NEDD9-208ENST00000504387 VKORC1L1Q8N0U8 176 aa6.44□□□□□ -1.38
NEDD9-208ENST00000504387 OCC1Q8TAD7 63 aa6.44□□□□□ -1.38
NEDD9-208ENST00000504387 SLC35E1Q96K37 410 aa6.44□□□□□ -1.38
NEDD9-208ENST00000504387 P2RX4Q99571 388 aa6.44□□□□□ -1.38
NEDD9-208ENST00000504387 FOXB1Q99853 325 aa6.44□□□□□ -1.38
NEDD9-208ENST00000504387 VPS25Q9BRG1 176 aa6.44□□□□□ -1.38
NEDD9-208ENST00000504387 HINT2Q9BX68 163 aa6.44□□□□□ -1.38
NEDD9-208ENST00000504387 GPR35Q9HC97 309 aa6.44□□□□□ -1.38
NEDD9-208ENST00000504387 GCM1Q9NP62 436 aa6.44□□□□□ -1.38
NEDD9-208ENST00000504387 NAT8BQ9UHF3 227 aa6.44□□□□□ -1.38
NEDD9-208ENST00000504387 OR2W1Q9Y3N9 320 aa6.44□□□□□ -1.38
NEDD9-208ENST00000504387 A0A0G2JMM0 328 aa6.44□□□□□ -1.38
NEDD9-208ENST00000504387 IGHV5-10-1A0A0J9YXX1 117 aa6.44□□□□□ -1.38
NEDD9-208ENST00000504387 A0A1W2PPB8 328 aa6.44□□□□□ -1.38
NEDD9-208ENST00000504387 A0A1W2PRS3 328 aa6.44□□□□□ -1.38
NEDD9-208ENST00000504387 FAM166BA8MTA8 275 aa6.44□□□□□ -1.38
NEDD9-208ENST00000504387 KIR3DP1A8MWS1 328 aa6.44□□□□□ -1.38
NEDD9-208ENST00000504387 H0Y980 276 aa6.44□□□□□ -1.38
NEDD9-208ENST00000504387 UMODP07911 640 aa6.44□□□□□ -1.38
NEDD9-208ENST00000504387 CDC34P49427 236 aaPredicted RBP6.44□□□□□ -1.38
NEDD9-208ENST00000504387 SSR4P51571 173 aa6.44□□□□□ -1.38
NEDD9-208ENST00000504387 HTD2P86397 168 aa6.44□□□□□ -1.38
NEDD9-208ENST00000504387 VAMP3Q15836 100 aa6.44□□□□□ -1.38
NEDD9-208ENST00000504387 C3AR1Q16581 482 aa6.44□□□□□ -1.38
NEDD9-208ENST00000504387 HIST3H3Q16695 136 aa6.44□□□□□ -1.38
NEDD9-208ENST00000504387 PCSK4Q6UW60 755 aa6.44□□□□□ -1.38
NEDD9-208ENST00000504387 TGIF2LYQ8IUE0 185 aa6.44□□□□□ -1.38
NEDD9-208ENST00000504387 OR10P1Q8NGE3 313 aa6.44□□□□□ -1.38
NEDD9-208ENST00000504387 RCHY1Q96PM5 261 aa6.44□□□□□ -1.38
NEDD9-208ENST00000504387 PYGO2Q9BRQ0 406 aa6.44□□□□□ -1.38
NEDD9-208ENST00000504387 TWSG1Q9GZX9 223 aa6.44□□□□□ -1.38
NEDD9-208ENST00000504387 TBL2Q9Y4P3 447 aaKnown RBP6.44□□□□□ -1.38
NEDD9-208ENST00000504387 PXMP4Q9Y6I8 212 aa6.44□□□□□ -1.38
NEDD9-208ENST00000504387 CADP27708 2225 aa6.43□□□□□ -1.38
NEDD9-208ENST00000504387 PTPRZ1P23471 2315 aaPredicted RBP6.43□□□□□ -1.38
NEDD9-208ENST00000504387 TRAV1-1A0A0B4J248 108 aa6.43□□□□□ -1.38
NEDD9-208ENST00000504387 TNFSF13O75888 250 aa6.43□□□□□ -1.38
NEDD9-208ENST00000504387 IGLV3-1P01715 115 aa6.43□□□□□ -1.38
NEDD9-208ENST00000504387 DUSP3P51452 185 aaPredicted RBP6.43□□□□□ -1.38
NEDD9-208ENST00000504387 SOX8P57073 446 aa6.43□□□□□ -1.38
NEDD9-208ENST00000504387 RELBQ01201 579 aa6.43□□□□□ -1.38
NEDD9-208ENST00000504387 COTL1Q14019 142 aa6.43□□□□□ -1.38
NEDD9-208ENST00000504387 DOLPP1Q86YN1 238 aa6.43□□□□□ -1.38
NEDD9-208ENST00000504387 NFAM1Q8NET5 270 aaPredicted RBP6.43□□□□□ -1.38
NEDD9-208ENST00000504387 PINX1Q96BK5 328 aaKnown RBP6.43□□□□□ -1.38
NEDD9-208ENST00000504387 SFRP2Q96HF1 295 aa6.43□□□□□ -1.38
NEDD9-208ENST00000504387 WNT5BQ9H1J7 359 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms