RNA–Protein interactions for RNA: ENST00000504274.1

COPS4-203, Transcript of COP9 signalosome subunit 4, humanhuman

TSL 2

Gene COPS4, Length 457 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4-203ENST00000504274 SCGB1D4Q6XE38 83 aa2.36□□□□□ -2.03
COPS4-203ENST00000504274 HIST2H3AQ71DI3 136 aa2.36□□□□□ -2.03
COPS4-203ENST00000504274 LINC00596Q86U02 117 aa2.36□□□□□ -2.03
COPS4-203ENST00000504274 SREK1IP1Q8N9Q2 155 aaPredicted RBP2.36□□□□□ -2.03
COPS4-203ENST00000504274 TMEM35BQ8NCS4 154 aa2.36□□□□□ -2.03
COPS4-203ENST00000504274 ST6GALNAC3Q8NDV1 305 aa2.36□□□□□ -2.03
COPS4-203ENST00000504274 OR9I1Q8NGQ6 314 aa2.36□□□□□ -2.03
COPS4-203ENST00000504274 MFSD8Q8NHS3 518 aa2.36□□□□□ -2.03
COPS4-203ENST00000504274 FAM57AQ8TBR7 257 aa2.36□□□□□ -2.03
COPS4-203ENST00000504274 OLFM3Q96PB7 478 aa2.36□□□□□ -2.03
COPS4-203ENST00000504274 MARVELD1Q9BSK0 173 aa2.36□□□□□ -2.03
COPS4-203ENST00000504274 THTPAQ9BU02 230 aa2.36□□□□□ -2.03
COPS4-203ENST00000504274 ENY2Q9NPA8 101 aa2.36□□□□□ -2.03
COPS4-203ENST00000504274 TAS2R1Q9NYW7 299 aa2.36□□□□□ -2.03
COPS4-203ENST00000504274 OPTCQ9UBM4 332 aa2.36□□□□□ -2.03
COPS4-203ENST00000504274 POMPQ9Y244 141 aa2.36□□□□□ -2.03
COPS4-203ENST00000504274 COQ4Q9Y3A0 265 aa2.36□□□□□ -2.03
COPS4-203ENST00000504274 UTP11Q9Y3A2 253 aaKnown RBP2.36□□□□□ -2.03
COPS4-203ENST00000504274 ARAP1Q96P48 1450 aa2.36□□□□□ -2.03
COPS4-203ENST00000504274 ZBED9Q6R2W3 1325 aa2.36□□□□□ -2.03
COPS4-203ENST00000504274 REREQ9P2R6 1566 aa2.36□□□□□ -2.03
COPS4-203ENST00000504274 NID2Q14112 1375 aa2.36□□□□□ -2.03
COPS4-203ENST00000504274 ZNF106Q9H2Y7 1883 aaKnown RBP2.35□□□□□ -2.03
COPS4-203ENST00000504274 LOC102724200A0A096LPH7 203 aaPredicted RBP2.35□□□□□ -2.03
COPS4-203ENST00000504274 TMED7-TICAM2A0A0A6YYA0 188 aa2.35□□□□□ -2.03
COPS4-203ENST00000504274 A0A0G2JMP0 313 aa2.35□□□□□ -2.03
COPS4-203ENST00000504274 C16orf90A8MZG2 172 aa2.35□□□□□ -2.03
COPS4-203ENST00000504274 PPP5D1E7EU14 171 aa2.35□□□□□ -2.03
COPS4-203ENST00000504274 OR4A8P0C604 315 aa2.35□□□□□ -2.03
COPS4-203ENST00000504274 OR4Q2P0C623 313 aa2.35□□□□□ -2.03
COPS4-203ENST00000504274 CTLA4P16410 223 aa2.35□□□□□ -2.03
COPS4-203ENST00000504274 GADD45AP24522 165 aa2.35□□□□□ -2.03
COPS4-203ENST00000504274 CMC4P56277 68 aaPredicted RBP2.35□□□□□ -2.03
COPS4-203ENST00000504274 RPS20P60866 119 aaKnown RBP2.35□□□□□ -2.03
COPS4-203ENST00000504274 RAB2AP61019 212 aa2.35□□□□□ -2.03
COPS4-203ENST00000504274 ELF3P78545 371 aaPredicted RBP2.35□□□□□ -2.03
COPS4-203ENST00000504274 ARHGAP11BQ3KRB8 267 aa2.35□□□□□ -2.03
COPS4-203ENST00000504274 TMEM78Q5T7P6 136 aa2.35□□□□□ -2.03
COPS4-203ENST00000504274 HENMT1Q5T8I9 393 aaKnown RBP2.35□□□□□ -2.03
COPS4-203ENST00000504274 N4BP2L1Q5TBK1 243 aaPredicted RBP2.35□□□□□ -2.03
COPS4-203ENST00000504274 Q6ZSR6 202 aa2.35□□□□□ -2.03
COPS4-203ENST00000504274 DAZ4Q86SG3 579 aaKnown RBP2.35□□□□□ -2.03
COPS4-203ENST00000504274 OR4M2Q8NGB6 313 aa2.35□□□□□ -2.03
COPS4-203ENST00000504274 OR52N1Q8NH53 320 aa2.35□□□□□ -2.03
COPS4-203ENST00000504274 OR1L1Q8NH94 360 aa2.35□□□□□ -2.03
COPS4-203ENST00000504274 ACY3Q96HD9 319 aa2.35□□□□□ -2.03
COPS4-203ENST00000504274 DIRAS2Q96HU8 199 aa2.35□□□□□ -2.03
COPS4-203ENST00000504274 IP6K3Q96PC2 410 aa2.35□□□□□ -2.03
COPS4-203ENST00000504274 MRPL20Q9BYC9 149 aaKnown RBP2.35□□□□□ -2.03
COPS4-203ENST00000504274 C6orf62Q9GZU0 229 aaPredicted RBP2.35□□□□□ -2.03
COPS4-203ENST00000504274 DAZ1Q9NQZ3 744 aaKnown RBP2.35□□□□□ -2.03
COPS4-203ENST00000504274 DOK5Q9P104 306 aa2.35□□□□□ -2.03
COPS4-203ENST00000504274 SHANK1Q9Y566 2161 aa2.34□□□□□ -2.03
COPS4-203ENST00000504274 NPHP4O75161 1426 aaPredicted RBP2.34□□□□□ -2.03
COPS4-203ENST00000504274 MYH10P35580 1976 aa2.34□□□□□ -2.03
COPS4-203ENST00000504274 SCN10AQ9Y5Y9 1956 aa2.34□□□□□ -2.03
COPS4-203ENST00000504274 VIRMAQ69YN4 1812 aaKnown RBP2.34□□□□□ -2.03
COPS4-203ENST00000504274 IGKV3D-11A0A0A0MRZ8 115 aa2.34□□□□□ -2.03
COPS4-203ENST00000504274 IGHV3-49A0A0A0MS15 119 aa2.34□□□□□ -2.03
COPS4-203ENST00000504274 TMEM72A0PK05 275 aa2.34□□□□□ -2.03
COPS4-203ENST00000504274 GMNCA6NCL1 334 aa2.34□□□□□ -2.03
COPS4-203ENST00000504274 EIF1BO60739 113 aaKnown RBP2.34□□□□□ -2.03
COPS4-203ENST00000504274 ATG12O94817 140 aa2.34□□□□□ -2.03
COPS4-203ENST00000504274 CYB5R3P00387 301 aaPredicted RBP2.34□□□□□ -2.03
COPS4-203ENST00000504274 HBZP02008 142 aa2.34□□□□□ -2.03
COPS4-203ENST00000504274 SOD3P08294 240 aa2.34□□□□□ -2.03
COPS4-203ENST00000504274 SULT1A3P0DMM9 295 aa2.34□□□□□ -2.03
COPS4-203ENST00000504274 SULT1A4P0DMN0 295 aa2.34□□□□□ -2.03
COPS4-203ENST00000504274 OR13C7P0DN81 318 aa2.34□□□□□ -2.03
COPS4-203ENST00000504274 CD79AP11912 226 aa2.34□□□□□ -2.03
COPS4-203ENST00000504274 CTSEP14091 401 aa2.34□□□□□ -2.03
COPS4-203ENST00000504274 IMPA1P29218 277 aa2.34□□□□□ -2.03
COPS4-203ENST00000504274 TGFBR1P36897 503 aa2.34□□□□□ -2.03
COPS4-203ENST00000504274 HSPA9P38646 679 aaKnown RBP2.34□□□□□ -2.03
COPS4-203ENST00000504274 EIF1P41567 113 aaKnown RBP2.34□□□□□ -2.03
COPS4-203ENST00000504274 DAPP51397 102 aa2.34□□□□□ -2.03
COPS4-203ENST00000504274 DEFA1P59665 94 aa2.34□□□□□ -2.03
COPS4-203ENST00000504274 HSPE1P61604 102 aaKnown RBP2.34□□□□□ -2.03
COPS4-203ENST00000504274 DAD1P61803 113 aa2.34□□□□□ -2.03
COPS4-203ENST00000504274 FABP5Q01469 135 aa2.34□□□□□ -2.03
COPS4-203ENST00000504274 FLI1Q01543 452 aaPredicted RBP2.34□□□□□ -2.03
COPS4-203ENST00000504274 BTN1A1Q13410 526 aa2.34□□□□□ -2.03
COPS4-203ENST00000504274 IAH1Q2TAA2 248 aaPredicted RBP2.34□□□□□ -2.03
COPS4-203ENST00000504274 MRPL2Q5T653 305 aaKnown RBP2.34□□□□□ -2.03
COPS4-203ENST00000504274 C9orf64Q5T6V5 341 aa2.34□□□□□ -2.03
COPS4-203ENST00000504274 CYHR1Q6ZMK1 362 aa2.34□□□□□ -2.03
COPS4-203ENST00000504274 ATP5L2Q7Z4Y8 100 aa2.34□□□□□ -2.03
COPS4-203ENST00000504274 UBL4BQ8N7F7 174 aa2.34□□□□□ -2.03
COPS4-203ENST00000504274 APCDD1LQ8NCL9 501 aa2.34□□□□□ -2.03
COPS4-203ENST00000504274 OR8B12Q8NGG6 310 aa2.34□□□□□ -2.03
COPS4-203ENST00000504274 OR51A2Q8NGJ7 313 aa2.34□□□□□ -2.03
COPS4-203ENST00000504274 OR1J4Q8NGS1 313 aa2.34□□□□□ -2.03
COPS4-203ENST00000504274 OR10A6Q8NH74 314 aa2.34□□□□□ -2.03
COPS4-203ENST00000504274 LHFPL5Q8TAF8 219 aa2.34□□□□□ -2.03
COPS4-203ENST00000504274 MAL2Q969L2 176 aa2.34□□□□□ -2.03
COPS4-203ENST00000504274 MRPL48Q96GC5 212 aaKnown RBP2.34□□□□□ -2.03
COPS4-203ENST00000504274 SLC25A44Q96H78 314 aaPredicted RBP2.34□□□□□ -2.03
COPS4-203ENST00000504274 CMSS1Q9BQ75 279 aaKnown RBP2.34□□□□□ -2.03
COPS4-203ENST00000504274 TRIM4Q9C037 500 aa2.34□□□□□ -2.03
COPS4-203ENST00000504274 TMEM222Q9H0R3 208 aa2.34□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms