RNA–Protein interactions for RNA: ENST00000496136.5

ECHDC3-205, Transcript of enoyl-CoA hydratase domain containing 3, humanhuman

TSL 1 (best)

Gene ECHDC3, Length 1,767 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3-205ENST00000496136 MTORP42345 2549 aa17.58■□□□□ 0.4
ECHDC3-205ENST00000496136 A0A1W2PPI3 338 aa17.58■□□□□ 0.4
ECHDC3-205ENST00000496136 TXNL1O43396 289 aa17.58■□□□□ 0.4
ECHDC3-205ENST00000496136 ANXA7P20073 488 aaKnown RBP17.58■□□□□ 0.4
ECHDC3-205ENST00000496136 HNF1AP20823 631 aa17.58■□□□□ 0.4
ECHDC3-205ENST00000496136 RAB25P57735 213 aa17.58■□□□□ 0.4
ECHDC3-205ENST00000496136 CCDC144NLQ6NUI1 221 aa17.58■□□□□ 0.4
ECHDC3-205ENST00000496136 SLC25A42Q86VD7 318 aa17.58■□□□□ 0.4
ECHDC3-205ENST00000496136 CCDC71LQ8N9Z2 235 aa17.58■□□□□ 0.4
ECHDC3-205ENST00000496136 OR51H1Q8NH63 302 aa17.58■□□□□ 0.4
ECHDC3-205ENST00000496136 F2RP25116 425 aa17.57■□□□□ 0.4
ECHDC3-205ENST00000496136 SRP14P37108 136 aaKnown RBP17.57■□□□□ 0.4
ECHDC3-205ENST00000496136 TMEM128Q5BJH2 165 aa17.57■□□□□ 0.4
ECHDC3-205ENST00000496136 MOB3BQ86TA1 216 aa17.57■□□□□ 0.4
ECHDC3-205ENST00000496136 OR8H3Q8N146 312 aa17.57■□□□□ 0.4
ECHDC3-205ENST00000496136 CAPSLQ8WWF8 208 aa17.57■□□□□ 0.4
ECHDC3-205ENST00000496136 DDB2Q92466 427 aa17.57■□□□□ 0.4
ECHDC3-205ENST00000496136 ALX4Q9H161 411 aaPredicted RBP17.57■□□□□ 0.4
ECHDC3-205ENST00000496136 MEGF9Q9H1U4 602 aa17.57■□□□□ 0.4
ECHDC3-205ENST00000496136 THBS3P49746 956 aa17.56■□□□□ 0.4
ECHDC3-205ENST00000496136 MECP2P51608 486 aaKnown RBP17.56■□□□□ 0.4
ECHDC3-205ENST00000496136 BRWD1-AS2P59051 145 aa17.56■□□□□ 0.4
ECHDC3-205ENST00000496136 DHODHQ02127 395 aa17.56■□□□□ 0.4
ECHDC3-205ENST00000496136 TRIM16LQ309B1 348 aa17.56■□□□□ 0.4
ECHDC3-205ENST00000496136 KCTD9Q7L273 389 aa17.56■□□□□ 0.4
ECHDC3-205ENST00000496136 OR5AN1Q8NGI8 311 aa17.56■□□□□ 0.4
ECHDC3-205ENST00000496136 CHPT1Q8WUD6 406 aa17.56■□□□□ 0.4
ECHDC3-205ENST00000496136 TCTEX1D2Q8WW35 142 aa17.56■□□□□ 0.4
ECHDC3-205ENST00000496136 ADTRPQ96IZ2 230 aa17.56■□□□□ 0.4
ECHDC3-205ENST00000496136 BEX2Q9BXY8 128 aa17.56■□□□□ 0.4
ECHDC3-205ENST00000496136 BEX1Q9HBH7 125 aa17.56■□□□□ 0.4
ECHDC3-205ENST00000496136 TEX13DA0A0J9YY54 714 aaPredicted RBP17.56■□□□□ 0.4
ECHDC3-205ENST00000496136 CRYM-AS1A6NIL9 109 aa17.56■□□□□ 0.4
ECHDC3-205ENST00000496136 INMT-MINDY4F8WBC2 141 aa17.56■□□□□ 0.4
ECHDC3-205ENST00000496136 TIMM23O14925 209 aa17.56■□□□□ 0.4
ECHDC3-205ENST00000496136 PEX14O75381 377 aa17.56■□□□□ 0.4
ECHDC3-205ENST00000496136 FBP1P09467 338 aa17.56■□□□□ 0.4
ECHDC3-205ENST00000496136 RBMXL1Q96E39 390 aaKnown RBP17.56■□□□□ 0.4
ECHDC3-205ENST00000496136 IGHV3-72A0A0B4J1Y9 119 aa17.55■□□□□ 0.4
ECHDC3-205ENST00000496136 RNF212BA8MTL3 300 aa17.55■□□□□ 0.4
ECHDC3-205ENST00000496136 VSIG10L2P0DP72 767 aa17.55■□□□□ 0.4
ECHDC3-205ENST00000496136 TAS2R31P59538 309 aa17.55■□□□□ 0.4
ECHDC3-205ENST00000496136 SUPT4H1P63272 117 aaKnown RBP17.55■□□□□ 0.4
ECHDC3-205ENST00000496136 CATR1Q13166 79 aa17.55■□□□□ 0.4
ECHDC3-205ENST00000496136 HABP2Q14520 560 aaPredicted RBP17.55■□□□□ 0.4
ECHDC3-205ENST00000496136 SGPP2Q8IWX5 399 aa17.55■□□□□ 0.4
ECHDC3-205ENST00000496136 CFHR4Q92496 578 aa17.55■□□□□ 0.4
ECHDC3-205ENST00000496136 NAA60Q9H7X0 242 aa17.55■□□□□ 0.4
ECHDC3-205ENST00000496136 ZFHX3Q15911 3703 aa17.54■□□□□ 0.4
ECHDC3-205ENST00000496136 C3orf85A0A1B0GTC6 90 aa17.54■□□□□ 0.4
ECHDC3-205ENST00000496136 H0YJW9 148 aa17.54■□□□□ 0.4
ECHDC3-205ENST00000496136 OR4E1P0C645 316 aa17.54■□□□□ 0.4
ECHDC3-205ENST00000496136 RAB13P51153 203 aa17.54■□□□□ 0.4
ECHDC3-205ENST00000496136 RAG2P55895 527 aa17.54■□□□□ 0.4
ECHDC3-205ENST00000496136 DEFB112Q30KQ8 113 aa17.54■□□□□ 0.4
ECHDC3-205ENST00000496136 TP53RKQ96S44 253 aa17.54■□□□□ 0.4
ECHDC3-205ENST00000496136 PRELID3BQ9Y3B1 194 aa17.54■□□□□ 0.4
ECHDC3-205ENST00000496136 MC5RP33032 325 aa17.53■□□□□ 0.4
ECHDC3-205ENST00000496136 UBE2MP61081 183 aaKnown RBP17.53■□□□□ 0.4
ECHDC3-205ENST00000496136 PPP1R1AQ13522 171 aa17.53■□□□□ 0.4
ECHDC3-205ENST00000496136 SP6Q3SY56 376 aa17.53■□□□□ 0.4
ECHDC3-205ENST00000496136 OR2B11Q5JQS5 317 aa17.53■□□□□ 0.4
ECHDC3-205ENST00000496136 CDC42EP3Q9UKI2 254 aa17.53■□□□□ 0.4
ECHDC3-205ENST00000496136 KCNIP3Q9Y2W7 256 aa17.53■□□□□ 0.4
ECHDC3-205ENST00000496136 MDFIC2A0A1B0GVS7 189 aa17.53■□□□□ 0.4
ECHDC3-205ENST00000496136 TAGLNQ01995 201 aaKnown RBP17.53■□□□□ 0.4
ECHDC3-205ENST00000496136 SPAG16Q8N0X2 631 aa17.53■□□□□ 0.4
ECHDC3-205ENST00000496136 MINDY2Q8NBR6 621 aa17.53■□□□□ 0.4
ECHDC3-205ENST00000496136 GALNT14Q96FL9 552 aa17.53■□□□□ 0.4
ECHDC3-205ENST00000496136 NSD1Q96L73 2696 aaPredicted RBP17.52■□□□□ 0.4
ECHDC3-205ENST00000496136 VGLL3A8MV65 326 aa17.52■□□□□ 0.4
ECHDC3-205ENST00000496136 INAFM1C9JVW0 142 aa17.52■□□□□ 0.4
ECHDC3-205ENST00000496136 RAMP3O60896 148 aa17.52■□□□□ 0.4
ECHDC3-205ENST00000496136 FCGR3BO75015 233 aa17.52■□□□□ 0.4
ECHDC3-205ENST00000496136 OR5AC1P0C628 307 aa17.52■□□□□ 0.4
ECHDC3-205ENST00000496136 VAMP1P23763 118 aa17.52■□□□□ 0.4
ECHDC3-205ENST00000496136 CD24P25063 80 aa17.52■□□□□ 0.4
ECHDC3-205ENST00000496136 CD1BP29016 333 aa17.52■□□□□ 0.4
ECHDC3-205ENST00000496136 ARHGDIBP52566 201 aa17.52■□□□□ 0.4
ECHDC3-205ENST00000496136 C4orf46Q504U0 113 aa17.52■□□□□ 0.4
ECHDC3-205ENST00000496136 GLYATL2Q8WU03 294 aa17.52■□□□□ 0.4
ECHDC3-205ENST00000496136 SLC35D1Q9NTN3 355 aa17.52■□□□□ 0.4
ECHDC3-205ENST00000496136 LIN7CQ9NUP9 197 aaKnown RBP17.52■□□□□ 0.4
ECHDC3-205ENST00000496136 FAM90A9PA6NNJ1 464 aa17.51■□□□□ 0.39
ECHDC3-205ENST00000496136 H0Y980 276 aa17.51■□□□□ 0.39
ECHDC3-205ENST00000496136 H7C2Y5 167 aa17.51■□□□□ 0.39
ECHDC3-205ENST00000496136 IGKV1-16P04430 117 aa17.51■□□□□ 0.39
ECHDC3-205ENST00000496136 BRS3P32247 399 aa17.51■□□□□ 0.39
ECHDC3-205ENST00000496136 TUSC1Q2TAM9 212 aa17.51■□□□□ 0.39
ECHDC3-205ENST00000496136 ZNF585BQ52M93 769 aa17.51■□□□□ 0.39
ECHDC3-205ENST00000496136 TCTEX1D1Q8N7M0 179 aa17.51■□□□□ 0.39
ECHDC3-205ENST00000496136 ZNF48Q96MX3 618 aaPredicted RBP17.51■□□□□ 0.39
ECHDC3-205ENST00000496136 SSX3Q99909 188 aa17.51■□□□□ 0.39
ECHDC3-205ENST00000496136 PRDM13Q9H4Q3 707 aa17.51■□□□□ 0.39
ECHDC3-205ENST00000496136 WASHC3Q9Y3C0 194 aa17.51■□□□□ 0.39
ECHDC3-205ENST00000496136 C9orf170A2RU37 121 aa17.51■□□□□ 0.39
ECHDC3-205ENST00000496136 VENTXO95231 258 aa17.51■□□□□ 0.39
ECHDC3-205ENST00000496136 DHFRP00374 187 aa17.51■□□□□ 0.39
ECHDC3-205ENST00000496136 APOA2P02652 100 aa17.51■□□□□ 0.39
ECHDC3-205ENST00000496136 DYNLT3P51808 116 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms