RNA–Protein interactions for RNA: ENST00000496081.5

HLA-A-208, Transcript of major histocompatibility complex, class I, A, humanhuman

Gene HLA-A, Length 1,786 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-A-208ENST00000496081 FAM210AQ96ND0 272 aa13.43□□□□□ -0.26
HLA-A-208ENST00000496081 ARPC5LQ9BPX5 153 aa13.43□□□□□ -0.26
HLA-A-208ENST00000496081 SPOCK3Q9BQ16 436 aa13.43□□□□□ -0.26
HLA-A-208ENST00000496081 C11orf1Q9H5F2 150 aa13.43□□□□□ -0.26
HLA-A-208ENST00000496081 ZNRD1Q9P1U0 126 aa13.43□□□□□ -0.26
HLA-A-208ENST00000496081 CACNG5Q9UF02 275 aa13.43□□□□□ -0.26
HLA-A-208ENST00000496081 KIAA1324LA8MWY0 1029 aaPredicted RBP13.42□□□□□ -0.26
HLA-A-208ENST00000496081 OVOL3O00110 214 aa13.42□□□□□ -0.26
HLA-A-208ENST00000496081 KRASP01116 189 aa13.42□□□□□ -0.26
HLA-A-208ENST00000496081 G6PCP35575 357 aa13.42□□□□□ -0.26
HLA-A-208ENST00000496081 EFNA4P52798 201 aa13.42□□□□□ -0.26
HLA-A-208ENST00000496081 CD300LFQ8TDQ1 290 aa13.42□□□□□ -0.26
HLA-A-208ENST00000496081 MAGT1Q9H0U3 335 aa13.42□□□□□ -0.26
HLA-A-208ENST00000496081 PLEKHA2Q9HB19 425 aa13.42□□□□□ -0.26
HLA-A-208ENST00000496081 UBQLN2Q9UHD9 624 aa13.42□□□□□ -0.26
HLA-A-208ENST00000496081 MMP24Q9Y5R2 645 aa13.42□□□□□ -0.26
HLA-A-208ENST00000496081 FCGR3BO75015 233 aa13.41□□□□□ -0.26
HLA-A-208ENST00000496081 NXPH3O95157 252 aa13.41□□□□□ -0.26
HLA-A-208ENST00000496081 SPDEFO95238 335 aa13.41□□□□□ -0.26
HLA-A-208ENST00000496081 P0C879 139 aa13.41□□□□□ -0.26
HLA-A-208ENST00000496081 HTR2BP41595 481 aa13.41□□□□□ -0.26
HLA-A-208ENST00000496081 TLE4Q04727 773 aa13.41□□□□□ -0.26
HLA-A-208ENST00000496081 DDB2Q92466 427 aa13.41□□□□□ -0.26
HLA-A-208ENST00000496081 RAB39BQ96DA2 213 aa13.41□□□□□ -0.26
HLA-A-208ENST00000496081 ZNF471Q9BX82 626 aaPredicted RBP13.41□□□□□ -0.26
HLA-A-208ENST00000496081 F5H0A9 414 aaPredicted RBP13.4□□□□□ -0.26
HLA-A-208ENST00000496081 ATG12O94817 140 aa13.4□□□□□ -0.26
HLA-A-208ENST00000496081 IGHV1-8P0DP01 117 aa13.4□□□□□ -0.26
HLA-A-208ENST00000496081 P2RY1P47900 373 aa13.4□□□□□ -0.26
HLA-A-208ENST00000496081 SLC7A5P1Q8MH63 180 aa13.4□□□□□ -0.26
HLA-A-208ENST00000496081 PATZ1Q9HBE1 687 aaKnown RBP13.4□□□□□ -0.26
HLA-A-208ENST00000496081 PRELID3BQ9Y3B1 194 aa13.4□□□□□ -0.26
HLA-A-208ENST00000496081 AKAP6Q13023 2319 aa13.4□□□□□ -0.26
HLA-A-208ENST00000496081 A0A087X0M5 115 aa13.4□□□□□ -0.26
HLA-A-208ENST00000496081 A0A1B0GX30 115 aa13.4□□□□□ -0.26
HLA-A-208ENST00000496081 RBFOX2O43251 390 aaKnown RBP eCLIP13.4□□□□□ -0.26
HLA-A-208ENST00000496081 SSSCA1O60232 199 aa13.4□□□□□ -0.26
HLA-A-208ENST00000496081 GPR6P46095 362 aaPredicted RBP13.4□□□□□ -0.26
HLA-A-208ENST00000496081 UBA52P62987 128 aaKnown RBP13.4□□□□□ -0.26
HLA-A-208ENST00000496081 C8orf46Q8TAG6 207 aa13.4□□□□□ -0.26
HLA-A-208ENST00000496081 IGFBPL1Q8WX77 278 aa13.4□□□□□ -0.26
HLA-A-208ENST00000496081 ST8SIA2Q92186 375 aa13.4□□□□□ -0.26
HLA-A-208ENST00000496081 S1PR3Q99500 378 aa13.4□□□□□ -0.26
HLA-A-208ENST00000496081 NARFLQ9H6Q4 476 aa13.4□□□□□ -0.26
HLA-A-208ENST00000496081 CYTL1Q9NRR1 136 aa13.4□□□□□ -0.26
HLA-A-208ENST00000496081 PPIAL4CA0A0B4J2A2 164 aa13.39□□□□□ -0.27
HLA-A-208ENST00000496081 HPRT1P00492 218 aa13.39□□□□□ -0.27
HLA-A-208ENST00000496081 PPIAL4GP0DN37 164 aa13.39□□□□□ -0.27
HLA-A-208ENST00000496081 THBS3P49746 956 aa13.39□□□□□ -0.27
HLA-A-208ENST00000496081 ALKAL2Q6UX46 152 aa13.39□□□□□ -0.27
HLA-A-208ENST00000496081 OR8H3Q8N146 312 aa13.39□□□□□ -0.27
HLA-A-208ENST00000496081 C8orf31Q8N9H6 132 aa13.39□□□□□ -0.27
HLA-A-208ENST00000496081 ZNF383Q8NA42 475 aa13.39□□□□□ -0.27
HLA-A-208ENST00000496081 ZNF596Q8TC21 504 aa13.39□□□□□ -0.27
HLA-A-208ENST00000496081 ZC4H2Q9NQZ6 224 aa13.39□□□□□ -0.27
HLA-A-208ENST00000496081 COA4Q9NYJ1 87 aa13.39□□□□□ -0.27
HLA-A-208ENST00000496081 MARCH11A6NNE9 402 aa13.38□□□□□ -0.27
HLA-A-208ENST00000496081 J3QR06 171 aa13.38□□□□□ -0.27
HLA-A-208ENST00000496081 CHST1O43916 411 aa13.38□□□□□ -0.27
HLA-A-208ENST00000496081 TMEM50AO95807 157 aa13.38□□□□□ -0.27
HLA-A-208ENST00000496081 PVALBP20472 110 aaPredicted RBP13.38□□□□□ -0.27
HLA-A-208ENST00000496081 KIR2DS2P43631 304 aa13.38□□□□□ -0.27
HLA-A-208ENST00000496081 MIDNQ504T8 468 aa13.38□□□□□ -0.27
HLA-A-208ENST00000496081 GPR157Q5UAW9 335 aa13.38□□□□□ -0.27
HLA-A-208ENST00000496081 LINC00311Q8N616 119 aa13.38□□□□□ -0.27
HLA-A-208ENST00000496081 R3HDM4Q96D70 268 aa13.38□□□□□ -0.27
HLA-A-208ENST00000496081 ADTRPQ96IZ2 230 aa13.38□□□□□ -0.27
HLA-A-208ENST00000496081 A0A1W2PPH5 198 aa13.37□□□□□ -0.27
HLA-A-208ENST00000496081 C22orf46C9J442 243 aa13.37□□□□□ -0.27
HLA-A-208ENST00000496081 WRBO00258 174 aa13.37□□□□□ -0.27
HLA-A-208ENST00000496081 GPR137BO60478 399 aa13.37□□□□□ -0.27
HLA-A-208ENST00000496081 CT45A6P0DMU7 189 aa13.37□□□□□ -0.27
HLA-A-208ENST00000496081 CT45A5P0DMU8 189 aa13.37□□□□□ -0.27
HLA-A-208ENST00000496081 CT45A7P0DMV0 189 aa13.37□□□□□ -0.27
HLA-A-208ENST00000496081 MMP9P14780 707 aa13.37□□□□□ -0.27
HLA-A-208ENST00000496081 GNB2P62879 340 aa13.37□□□□□ -0.27
HLA-A-208ENST00000496081 CLEC9AQ6UXN8 241 aa13.37□□□□□ -0.27
HLA-A-208ENST00000496081 ZNF833PQ6ZTB9 187 aa13.37□□□□□ -0.27
HLA-A-208ENST00000496081 H2BFWTQ7Z2G1 175 aa13.37□□□□□ -0.27
HLA-A-208ENST00000496081 OR2C3Q8N628 320 aa13.37□□□□□ -0.27
HLA-A-208ENST00000496081 LY6G5BQ8NDX9 201 aa13.37□□□□□ -0.27
HLA-A-208ENST00000496081 TMEM133Q9H2Q1 129 aa13.37□□□□□ -0.27
HLA-A-208ENST00000496081 SESN1Q9Y6P5 492 aa13.37□□□□□ -0.27
HLA-A-208ENST00000496081 FAM24AA6NFZ4 105 aa13.37□□□□□ -0.27
HLA-A-208ENST00000496081 PAX9P55771 341 aa13.37□□□□□ -0.27
HLA-A-208ENST00000496081 VAMP2P63027 116 aa13.37□□□□□ -0.27
HLA-A-208ENST00000496081 ABHD12Q8N2K0 398 aa13.37□□□□□ -0.27
HLA-A-208ENST00000496081 OR9G1Q8NH87 305 aa13.37□□□□□ -0.27
HLA-A-208ENST00000496081 STOML3Q8TAV4 291 aa13.37□□□□□ -0.27
HLA-A-208ENST00000496081 SCARB1Q8WTV0 552 aa13.37□□□□□ -0.27
HLA-A-208ENST00000496081 BSCL2Q96G97 398 aaPredicted RBP13.37□□□□□ -0.27
HLA-A-208ENST00000496081 GSX2Q9BZM3 304 aa13.37□□□□□ -0.27
HLA-A-208ENST00000496081 LYRM2Q9NU23 88 aaPredicted RBP13.37□□□□□ -0.27
HLA-A-208ENST00000496081 FBXL17Q9UF56 701 aa13.37□□□□□ -0.27
HLA-A-208ENST00000496081 UTP20O75691 2785 aaKnown RBP13.36□□□□□ -0.27
HLA-A-208ENST00000496081 RPS10-NUDT3A0A1W2PQS6 291 aa13.36□□□□□ -0.27
HLA-A-208ENST00000496081 TOR1AO14656 332 aa13.36□□□□□ -0.27
HLA-A-208ENST00000496081 TAAR5O14804 337 aa13.36□□□□□ -0.27
HLA-A-208ENST00000496081 CAV2P51636 162 aa13.36□□□□□ -0.27
HLA-A-208ENST00000496081 ZNF295-AS1Q8N0V1 137 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms