RNA–Protein interactions for RNA: ENST00000496050.1

SSR3-208, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 4 BASIC

Gene SSR3, Length 579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-208ENST00000496050 UAP1Q16222 522 aaPredicted RBP2.43□□□□□ -2.02
SSR3-208ENST00000496050 CDKL4Q5MAI5 379 aa2.43□□□□□ -2.02
SSR3-208ENST00000496050 LRRN1Q6UXK5 716 aa2.43□□□□□ -2.02
SSR3-208ENST00000496050 C1orf174Q8IYL3 243 aa2.43□□□□□ -2.02
SSR3-208ENST00000496050 UBL4BQ8N7F7 174 aa2.43□□□□□ -2.02
SSR3-208ENST00000496050 MIEN1Q9BRT3 115 aa2.43□□□□□ -2.02
SSR3-208ENST00000496050 TMEM109Q9BVC6 243 aa2.43□□□□□ -2.02
SSR3-208ENST00000496050 MAP1LC3AQ9H492 121 aa2.43□□□□□ -2.02
SSR3-208ENST00000496050 SLC2A9Q9NRM0 540 aa2.43□□□□□ -2.02
SSR3-208ENST00000496050 DKKL1Q9UK85 242 aa2.43□□□□□ -2.02
SSR3-208ENST00000496050 CCL26Q9Y258 94 aa2.43□□□□□ -2.02
SSR3-208ENST00000496050 MINOS1-NBL1R4GNA1 71 aa2.43□□□□□ -2.02
SSR3-208ENST00000496050 SLIT2O94813 1529 aa2.42□□□□□ -2.02
SSR3-208ENST00000496050 DSCAML1Q8TD84 2053 aa2.42□□□□□ -2.02
SSR3-208ENST00000496050 TRGV4A0A0C4DH28 118 aa2.42□□□□□ -2.02
SSR3-208ENST00000496050 TMEM235A6NFC5 223 aa2.42□□□□□ -2.02
SSR3-208ENST00000496050 OR11H12B2RN74 326 aa2.42□□□□□ -2.02
SSR3-208ENST00000496050 H3BPC8 53 aa2.42□□□□□ -2.02
SSR3-208ENST00000496050 CXCR6O00574 342 aa2.42□□□□□ -2.02
SSR3-208ENST00000496050 NDUFB2O95178 105 aa2.42□□□□□ -2.02
SSR3-208ENST00000496050 KRT7P08729 469 aa2.42□□□□□ -2.02
SSR3-208ENST00000496050 GZMBP10144 247 aa2.42□□□□□ -2.02
SSR3-208ENST00000496050 CCL3P10147 92 aa2.42□□□□□ -2.02
SSR3-208ENST00000496050 GABRA4P48169 554 aa2.42□□□□□ -2.02
SSR3-208ENST00000496050 HOXC5Q00444 222 aa2.42□□□□□ -2.02
SSR3-208ENST00000496050 FOXF1Q12946 379 aa2.42□□□□□ -2.02
SSR3-208ENST00000496050 OR11H2Q8NH07 326 aa2.42□□□□□ -2.02
SSR3-208ENST00000496050 SLC35G5Q96KT7 338 aa2.42□□□□□ -2.02
SSR3-208ENST00000496050 C9orf84Q5VXU9 1444 aa2.42□□□□□ -2.02
SSR3-208ENST00000496050 DHX57Q6P158 1386 aaKnown RBP2.41□□□□□ -2.02
SSR3-208ENST00000496050 HLA-DQB2P05538 268 aa2.41□□□□□ -2.02
SSR3-208ENST00000496050 IL3P08700 152 aa2.41□□□□□ -2.02
SSR3-208ENST00000496050 RPL12P30050 165 aaKnown RBP2.41□□□□□ -2.02
SSR3-208ENST00000496050 PLPPR5Q32ZL2 321 aa2.41□□□□□ -2.02
SSR3-208ENST00000496050 RASSF6Q6ZTQ3 369 aa2.41□□□□□ -2.02
SSR3-208ENST00000496050 C2orf91Q6ZV80 131 aa2.41□□□□□ -2.02
SSR3-208ENST00000496050 COMMD7Q86VX2 200 aa2.41□□□□□ -2.02
SSR3-208ENST00000496050 KRTAP13-1Q8IUC0 172 aa2.41□□□□□ -2.02
SSR3-208ENST00000496050 TMEM161BQ8NDZ6 487 aa2.41□□□□□ -2.02
SSR3-208ENST00000496050 C12orf43Q96C57 262 aaKnown RBP2.41□□□□□ -2.02
SSR3-208ENST00000496050 KRTAP4-3Q9BYR4 195 aa2.41□□□□□ -2.02
SSR3-208ENST00000496050 PARVGQ9HBI0 331 aa2.41□□□□□ -2.02
SSR3-208ENST00000496050 MMACHCQ9Y4U1 282 aa2.41□□□□□ -2.02
SSR3-208ENST00000496050 OR6C6A6NF89 314 aa2.4□□□□□ -2.03
SSR3-208ENST00000496050 KNCNA6PVL3 124 aa2.4□□□□□ -2.03
SSR3-208ENST00000496050 ZNF189O75820 626 aaPredicted RBP2.4□□□□□ -2.03
SSR3-208ENST00000496050 IGHV1-69P01742 117 aa2.4□□□□□ -2.03
SSR3-208ENST00000496050 SERPINB10P48595 397 aa2.4□□□□□ -2.03
SSR3-208ENST00000496050 GNA12Q03113 381 aa2.4□□□□□ -2.03
SSR3-208ENST00000496050 JOSD1Q15040 202 aaPredicted RBP2.4□□□□□ -2.03
SSR3-208ENST00000496050 CHCHD2P9Q5T1J5 151 aaPredicted RBP2.4□□□□□ -2.03
SSR3-208ENST00000496050 FAM78BQ5VT40 261 aa2.4□□□□□ -2.03
SSR3-208ENST00000496050 CNEP1R1Q8N9A8 125 aa2.4□□□□□ -2.03
SSR3-208ENST00000496050 RNF133Q8WVZ7 376 aa2.4□□□□□ -2.03
SSR3-208ENST00000496050 TESCQ96BS2 214 aa2.4□□□□□ -2.03
SSR3-208ENST00000496050 TMA16Q96EY4 203 aaKnown RBP2.4□□□□□ -2.03
SSR3-208ENST00000496050 DNAJC30Q96LL9 226 aa2.4□□□□□ -2.03
SSR3-208ENST00000496050 FKBP14Q9NWM8 211 aa2.4□□□□□ -2.03
SSR3-208ENST00000496050 BABAM2Q9NXR7 383 aa2.4□□□□□ -2.03
SSR3-208ENST00000496050 OR5K4A6NMS3 321 aa2.39□□□□□ -2.03
SSR3-208ENST00000496050 C21orf140B9A014 251 aa2.39□□□□□ -2.03
SSR3-208ENST00000496050 NIPSNAP2O75323 286 aa2.39□□□□□ -2.03
SSR3-208ENST00000496050 KRTAP5-9P26371 169 aa2.39□□□□□ -2.03
SSR3-208ENST00000496050 RPL27AP46776 148 aaKnown RBP2.39□□□□□ -2.03
SSR3-208ENST00000496050 CTBP2P56545 445 aa2.39□□□□□ -2.03
SSR3-208ENST00000496050 TBPL1P62380 186 aa2.39□□□□□ -2.03
SSR3-208ENST00000496050 BATFQ16520 125 aa2.39□□□□□ -2.03
SSR3-208ENST00000496050 COQ5Q5HYK3 327 aa2.39□□□□□ -2.03
SSR3-208ENST00000496050 LGALS9CQ6DKI2 356 aa2.39□□□□□ -2.03
SSR3-208ENST00000496050 PTRHD1Q6GMV3 140 aaKnown RBP2.39□□□□□ -2.03
SSR3-208ENST00000496050 C5orf46Q6UWT4 87 aa2.39□□□□□ -2.03
SSR3-208ENST00000496050 RPS4Y2Q8TD47 263 aa2.39□□□□□ -2.03
SSR3-208ENST00000496050 OR51I2Q9H344 312 aa2.39□□□□□ -2.03
SSR3-208ENST00000496050 TMEM106BQ9NUM4 274 aa2.39□□□□□ -2.03
SSR3-208ENST00000496050 C3orf18Q9UK00 162 aa2.39□□□□□ -2.03
SSR3-208ENST00000496050 KLK5Q9Y337 293 aaPredicted RBP2.39□□□□□ -2.03
SSR3-208ENST00000496050 MYO16Q9Y6X6 1858 aa2.39□□□□□ -2.03
SSR3-208ENST00000496050 DOCK6Q96HP0 2047 aa2.39□□□□□ -2.03
SSR3-208ENST00000496050 KIF15Q9NS87 1388 aa2.38□□□□□ -2.03
SSR3-208ENST00000496050 IGHV3-15A0A0B4J1V0 119 aa2.38□□□□□ -2.03
SSR3-208ENST00000496050 A0A1W2PQL4 384 aaPredicted RBP2.38□□□□□ -2.03
SSR3-208ENST00000496050 DISC1C4P0D8 188 aa2.38□□□□□ -2.03
SSR3-208ENST00000496050 FNDC10F2Z333 226 aa2.38□□□□□ -2.03
SSR3-208ENST00000496050 LY6LH3BQJ8 138 aa2.38□□□□□ -2.03
SSR3-208ENST00000496050 TAS2R30P59541 319 aa2.38□□□□□ -2.03
SSR3-208ENST00000496050 RSU1Q15404 277 aa2.38□□□□□ -2.03
SSR3-208ENST00000496050 KRTAP6-3Q3LI67 103 aa2.38□□□□□ -2.03
SSR3-208ENST00000496050 CD200R1LQ6Q8B3 271 aa2.38□□□□□ -2.03
SSR3-208ENST00000496050 GLT6D1Q7Z4J2 308 aa2.38□□□□□ -2.03
SSR3-208ENST00000496050 DAND5Q8N907 189 aa2.38□□□□□ -2.03
SSR3-208ENST00000496050 FGF13Q92913 245 aa2.38□□□□□ -2.03
SSR3-208ENST00000496050 RAB8BQ92930 207 aa2.38□□□□□ -2.03
SSR3-208ENST00000496050 MRPS24Q96EL2 167 aaKnown RBP2.38□□□□□ -2.03
SSR3-208ENST00000496050 SPZ1Q9BXG8 430 aa2.38□□□□□ -2.03
SSR3-208ENST00000496050 TMEM222Q9H0R3 208 aa2.38□□□□□ -2.03
SSR3-208ENST00000496050 DICER1Q9UPY3 1922 aaKnown RBP2.38□□□□□ -2.03
SSR3-208ENST00000496050 ADAMTS7Q9UKP4 1686 aa2.37□□□□□ -2.03
SSR3-208ENST00000496050 REREQ9P2R6 1566 aa2.37□□□□□ -2.03
SSR3-208ENST00000496050 MUC21A0A0G2JKD1 596 aa2.37□□□□□ -2.03
SSR3-208ENST00000496050 MUC21A0A140T8X8 626 aa2.37□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 135.8 ms