RNA–Protein interactions for RNA: ENST00000495688.5

PTPN7-217, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 1 (best)

Gene PTPN7, Length 2,689 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-217ENST00000495688 UBE2NP61088 152 aaKnown RBP10.9□□□□□ -0.66
PTPN7-217ENST00000495688 RPL23P62829 140 aaKnown RBP10.9□□□□□ -0.66
PTPN7-217ENST00000495688 TMEM241Q24JQ0 296 aa10.9□□□□□ -0.66
PTPN7-217ENST00000495688 PRAMEF6Q5VXH4 476 aa10.9□□□□□ -0.66
PTPN7-217ENST00000495688 DHRS13Q6UX07 377 aa10.9□□□□□ -0.66
PTPN7-217ENST00000495688 LINC00469Q8N7U9 141 aa10.9□□□□□ -0.66
PTPN7-217ENST00000495688 OR10G9Q8NGN4 311 aa10.9□□□□□ -0.66
PTPN7-217ENST00000495688 OR10G7Q8NGN6 311 aa10.9□□□□□ -0.66
PTPN7-217ENST00000495688 KLF14Q8TD94 323 aaPredicted RBP10.9□□□□□ -0.66
PTPN7-217ENST00000495688 DCTN5Q9BTE1 182 aa10.9□□□□□ -0.66
PTPN7-217ENST00000495688 PARLQ9H300 379 aa10.9□□□□□ -0.66
PTPN7-217ENST00000495688 NAT8Q9UHE5 227 aa10.9□□□□□ -0.66
PTPN7-217ENST00000495688 MGAQ8IWI9 3026 aa10.9□□□□□ -0.66
PTPN7-217ENST00000495688 TMEM30CPA0ZSE6 113 aa10.9□□□□□ -0.67
PTPN7-217ENST00000495688 FAM90A26D6RGX4 464 aa10.9□□□□□ -0.67
PTPN7-217ENST00000495688 RAC2P15153 192 aa10.9□□□□□ -0.67
PTPN7-217ENST00000495688 EIF4EBP1Q13541 118 aaPredicted RBP10.9□□□□□ -0.67
PTPN7-217ENST00000495688 LTC4SQ16873 150 aa10.9□□□□□ -0.67
PTPN7-217ENST00000495688 ACSF3Q4G176 576 aaPredicted RBP10.9□□□□□ -0.67
PTPN7-217ENST00000495688 FFAR4Q5NUL3 377 aa10.9□□□□□ -0.67
PTPN7-217ENST00000495688 CYP2G1PQ6ZSU1 146 aa10.9□□□□□ -0.67
PTPN7-217ENST00000495688 C11orf53Q8IXP5 236 aa10.9□□□□□ -0.67
PTPN7-217ENST00000495688 OR4F5Q8NH21 305 aa10.9□□□□□ -0.67
PTPN7-217ENST00000495688 DTD1Q8TEA8 209 aa10.9□□□□□ -0.67
PTPN7-217ENST00000495688 GUCD1Q96NT3 240 aa10.9□□□□□ -0.67
PTPN7-217ENST00000495688 OR4F4Q96R69 305 aa10.9□□□□□ -0.67
PTPN7-217ENST00000495688 HIST1H2BLQ99880 126 aa10.9□□□□□ -0.67
PTPN7-217ENST00000495688 COLQQ9Y215 455 aaPredicted RBP10.9□□□□□ -0.67
PTPN7-217ENST00000495688 RNF212BA8MTL3 300 aa10.89□□□□□ -0.67
PTPN7-217ENST00000495688 KBTBD11O94819 623 aa10.89□□□□□ -0.67
PTPN7-217ENST00000495688 PFN1P07737 140 aaKnown RBP10.89□□□□□ -0.67
PTPN7-217ENST00000495688 HIST1H1BP16401 226 aaKnown RBP10.89□□□□□ -0.67
PTPN7-217ENST00000495688 ARG2P78540 354 aa10.89□□□□□ -0.67
PTPN7-217ENST00000495688 BSXQ3C1V8 233 aa10.89□□□□□ -0.67
PTPN7-217ENST00000495688 OR10A7Q8NGE5 316 aa10.89□□□□□ -0.67
PTPN7-217ENST00000495688 LAMP3Q9UQV4 416 aa10.89□□□□□ -0.67
PTPN7-217ENST00000495688 PCNX2A6NKB5 2137 aa10.89□□□□□ -0.67
PTPN7-217ENST00000495688 MAP1BP46821 2468 aaKnown RBP10.89□□□□□ -0.67
PTPN7-217ENST00000495688 IQCF6A8MYZ5 107 aa10.89□□□□□ -0.67
PTPN7-217ENST00000495688 COL10A1Q03692 680 aa10.89□□□□□ -0.67
PTPN7-217ENST00000495688 MRPL49Q13405 166 aaKnown RBP10.89□□□□□ -0.67
PTPN7-217ENST00000495688 GCSAMLQ5JQS6 135 aa10.89□□□□□ -0.67
PTPN7-217ENST00000495688 UNQ6494/PRO21346Q6UXR6 183 aa10.89□□□□□ -0.67
PTPN7-217ENST00000495688 OR5T1Q8NG75 326 aa10.89□□□□□ -0.67
PTPN7-217ENST00000495688 RAB24Q969Q5 203 aa10.89□□□□□ -0.67
PTPN7-217ENST00000495688 PACRGQ96M98 296 aaPredicted RBP10.89□□□□□ -0.67
PTPN7-217ENST00000495688 PARD6GQ9BYG4 376 aaPredicted RBP10.89□□□□□ -0.67
PTPN7-217ENST00000495688 MSL2Q9HCI7 577 aa10.89□□□□□ -0.67
PTPN7-217ENST00000495688 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.89□□□□□ -0.67
PTPN7-217ENST00000495688 HCFC1P51610 2035 aa10.88□□□□□ -0.67
PTPN7-217ENST00000495688 ELOA3CA0A087WX78 387 aaPredicted RBP10.88□□□□□ -0.67
PTPN7-217ENST00000495688 ST8SIA5O15466 376 aa10.88□□□□□ -0.67
PTPN7-217ENST00000495688 PAGE4O60829 102 aa10.88□□□□□ -0.67
PTPN7-217ENST00000495688 TNFSF15O95150 251 aa10.88□□□□□ -0.67
PTPN7-217ENST00000495688 CD46P15529 392 aa10.88□□□□□ -0.67
PTPN7-217ENST00000495688 EGR1P18146 543 aa10.88□□□□□ -0.67
PTPN7-217ENST00000495688 PSMB3P49720 205 aa10.88□□□□□ -0.67
PTPN7-217ENST00000495688 MSMO1Q15800 293 aa10.88□□□□□ -0.67
PTPN7-217ENST00000495688 CENPVQ7Z7K6 275 aaPredicted RBP10.88□□□□□ -0.67
PTPN7-217ENST00000495688 OR10P1Q8NGE3 313 aa10.88□□□□□ -0.67
PTPN7-217ENST00000495688 OR13A1Q8NGR1 328 aa10.88□□□□□ -0.67
PTPN7-217ENST00000495688 TMEM147Q9BVK8 224 aa10.88□□□□□ -0.67
PTPN7-217ENST00000495688 NPCDR1Q9BY65 106 aa10.88□□□□□ -0.67
PTPN7-217ENST00000495688 PRO1933Q9H354 126 aa10.88□□□□□ -0.67
PTPN7-217ENST00000495688 HES4Q9HCC6 221 aa10.88□□□□□ -0.67
PTPN7-217ENST00000495688 AURKAIP1Q9NWT8 199 aaPredicted RBP10.88□□□□□ -0.67
PTPN7-217ENST00000495688 DMXL2Q8TDJ6 3036 aa10.88□□□□□ -0.67
PTPN7-217ENST00000495688 INTS1Q8N201 2190 aaKnown RBP10.88□□□□□ -0.67
PTPN7-217ENST00000495688 CTXND1A0A1B0GTU2 59 aa10.88□□□□□ -0.67
PTPN7-217ENST00000495688 C1QTNF9BB2RNN3 333 aa10.88□□□□□ -0.67
PTPN7-217ENST00000495688 IGHV3-13P01766 116 aa10.88□□□□□ -0.67
PTPN7-217ENST00000495688 IGHV3-7P01780 117 aa10.88□□□□□ -0.67
PTPN7-217ENST00000495688 PRSS8Q16651 343 aa10.88□□□□□ -0.67
PTPN7-217ENST00000495688 Q3ZCU0 254 aa10.88□□□□□ -0.67
PTPN7-217ENST00000495688 OR51G1Q8NGK1 321 aa10.88□□□□□ -0.67
PTPN7-217ENST00000495688 NINJ1Q92982 152 aa10.88□□□□□ -0.67
PTPN7-217ENST00000495688 S100PBPQ96BU1 408 aa10.88□□□□□ -0.67
PTPN7-217ENST00000495688 CTDSP1Q9GZU7 261 aa10.88□□□□□ -0.67
PTPN7-217ENST00000495688 TIMM9Q9Y5J7 89 aa10.88□□□□□ -0.67
PTPN7-217ENST00000495688 CD59P13987 128 aa10.87□□□□□ -0.67
PTPN7-217ENST00000495688 GPX4P36969 197 aaPredicted RBP10.87□□□□□ -0.67
PTPN7-217ENST00000495688 AGMATQ9BSE5 352 aa10.87□□□□□ -0.67
PTPN7-217ENST00000495688 PCGF1Q9BSM1 259 aa10.87□□□□□ -0.67
PTPN7-217ENST00000495688 PSG11Q9UQ72 335 aa10.87□□□□□ -0.67
PTPN7-217ENST00000495688 EP300Q09472 2414 aaPredicted RBP10.87□□□□□ -0.67
PTPN7-217ENST00000495688 A0A1W2PPQ1 181 aa10.87□□□□□ -0.67
PTPN7-217ENST00000495688 OOEPA6NGQ2 149 aa10.87□□□□□ -0.67
PTPN7-217ENST00000495688 NPPCP23582 126 aa10.87□□□□□ -0.67
PTPN7-217ENST00000495688 GALR1P47211 349 aa10.87□□□□□ -0.67
PTPN7-217ENST00000495688 FABP6P51161 128 aa10.87□□□□□ -0.67
PTPN7-217ENST00000495688 P2RY6Q15077 328 aa10.87□□□□□ -0.67
PTPN7-217ENST00000495688 H2BFWTQ7Z2G1 175 aa10.87□□□□□ -0.67
PTPN7-217ENST00000495688 CNEP1R1Q8N9A8 125 aa10.87□□□□□ -0.67
PTPN7-217ENST00000495688 H7BYZ3 331 aa10.86□□□□□ -0.67
PTPN7-217ENST00000495688 CRYAAP02489 173 aa10.86□□□□□ -0.67
PTPN7-217ENST00000495688 COL8A2P25067 703 aa10.86□□□□□ -0.67
PTPN7-217ENST00000495688 CATR1Q13166 79 aa10.86□□□□□ -0.67
PTPN7-217ENST00000495688 GABRA6Q16445 453 aa10.86□□□□□ -0.67
PTPN7-217ENST00000495688 WDR82Q6UXN9 313 aa10.86□□□□□ -0.67
PTPN7-217ENST00000495688 SSX9Q7RTT3 188 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 88.4 ms