RNA–Protein interactions for RNA: ENST00000495528.1

VIM-207, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 962 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-207ENST00000495528 VEGFCP49767 419 aa5.1□□□□□ -1.59
VIM-207ENST00000495528 UBE2E1P51965 193 aa5.1□□□□□ -1.59
VIM-207ENST00000495528 QRFPP83859 136 aa5.1□□□□□ -1.59
VIM-207ENST00000495528 PNRC1Q12796 327 aaPredicted RBP5.1□□□□□ -1.59
VIM-207ENST00000495528 MADCAM1Q13477 382 aa5.1□□□□□ -1.59
VIM-207ENST00000495528 GPR176Q14439 515 aa5.1□□□□□ -1.59
VIM-207ENST00000495528 MICBQ29980 383 aa5.1□□□□□ -1.59
VIM-207ENST00000495528 NSUN5P1Q3KNT7 163 aa5.1□□□□□ -1.59
VIM-207ENST00000495528 VAX1Q5SQQ9 334 aa5.1□□□□□ -1.59
VIM-207ENST00000495528 HCP5Q6MZN7 132 aa5.1□□□□□ -1.59
VIM-207ENST00000495528 SLC36A1Q7Z2H8 476 aa5.1□□□□□ -1.59
VIM-207ENST00000495528 FAM58AQ8N1B3 248 aa5.1□□□□□ -1.59
VIM-207ENST00000495528 OSR2Q8N2R0 312 aa5.1□□□□□ -1.59
VIM-207ENST00000495528 SAMD12Q8N8I0 201 aa5.1□□□□□ -1.59
VIM-207ENST00000495528 TMEM104Q8NE00 496 aa5.1□□□□□ -1.59
VIM-207ENST00000495528 OR51T1Q8NGJ9 327 aa5.1□□□□□ -1.59
VIM-207ENST00000495528 OR5M8Q8NGP6 311 aa5.1□□□□□ -1.59
VIM-207ENST00000495528 OR10Z1Q8NGY1 313 aa5.1□□□□□ -1.59
VIM-207ENST00000495528 KCNG3Q8TAE7 436 aa5.1□□□□□ -1.59
VIM-207ENST00000495528 LGALS14Q8TCE9 139 aa5.1□□□□□ -1.59
VIM-207ENST00000495528 H1FXQ92522 213 aaKnown RBP5.1□□□□□ -1.59
VIM-207ENST00000495528 AP3S1Q92572 193 aa5.1□□□□□ -1.59
VIM-207ENST00000495528 EMG1Q92979 244 aaKnown RBP5.1□□□□□ -1.59
VIM-207ENST00000495528 CEP19Q96LK0 163 aa5.1□□□□□ -1.59
VIM-207ENST00000495528 SSX3Q99909 188 aa5.1□□□□□ -1.59
VIM-207ENST00000495528 SELENOIQ9C0D9 397 aa5.1□□□□□ -1.59
VIM-207ENST00000495528 SLIRPQ9GZT3 109 aaKnown RBP5.1□□□□□ -1.59
VIM-207ENST00000495528 C6orf62Q9GZU0 229 aaPredicted RBP5.1□□□□□ -1.59
VIM-207ENST00000495528 NXF2Q9GZY0 626 aaKnown RBP5.1□□□□□ -1.59
VIM-207ENST00000495528 TLNRD1Q9H1K6 362 aa5.1□□□□□ -1.59
VIM-207ENST00000495528 ATG5Q9H1Y0 275 aa5.1□□□□□ -1.59
VIM-207ENST00000495528 HMG20AQ9NP66 347 aa5.1□□□□□ -1.59
VIM-207ENST00000495528 NECAP2Q9NVZ3 263 aa5.1□□□□□ -1.59
VIM-207ENST00000495528 RBFOX1Q9NWB1 397 aaKnown RBP5.1□□□□□ -1.59
VIM-207ENST00000495528 CCDC59Q9P031 241 aaKnown RBP5.1□□□□□ -1.59
VIM-207ENST00000495528 GHRLQ9UBU3 117 aa5.1□□□□□ -1.59
VIM-207ENST00000495528 SPATA2Q9UM82 520 aa5.1□□□□□ -1.59
VIM-207ENST00000495528 POLDIP2Q9Y2S7 368 aa5.1□□□□□ -1.59
VIM-207ENST00000495528 MAB21L2Q9Y586 359 aa5.1□□□□□ -1.59
VIM-207ENST00000495528 TET2Q6N021 2002 aaPredicted RBP5.09□□□□□ -1.59
VIM-207ENST00000495528 DNAH3Q8TD57 4116 aa5.09□□□□□ -1.59
VIM-207ENST00000495528 A0A075B6Q4 140 aa5.09□□□□□ -1.59
VIM-207ENST00000495528 hCG_1809904A0A1W2PP81 198 aa5.09□□□□□ -1.59
VIM-207ENST00000495528 A0A1W2PPE2 198 aa5.09□□□□□ -1.59
VIM-207ENST00000495528 A0A1W2PR64 198 aa5.09□□□□□ -1.59
VIM-207ENST00000495528 TMEM14DPA8MWL7 114 aa5.09□□□□□ -1.59
VIM-207ENST00000495528 SMIM1B2RUZ4 78 aa5.09□□□□□ -1.59
VIM-207ENST00000495528 SH2D1BO14796 132 aa5.09□□□□□ -1.59
VIM-207ENST00000495528 DEGS1O15121 323 aa5.09□□□□□ -1.59
VIM-207ENST00000495528 SOCS1O15524 211 aa5.09□□□□□ -1.59
VIM-207ENST00000495528 ZNF780AO75290 641 aaPredicted RBP5.09□□□□□ -1.59
VIM-207ENST00000495528 TSHBP01222 138 aa5.09□□□□□ -1.59
VIM-207ENST00000495528 PGA5P0DJD9 388 aa5.09□□□□□ -1.59
VIM-207ENST00000495528 CD28P10747 220 aa5.09□□□□□ -1.59
VIM-207ENST00000495528 GTF2F2P13984 249 aa5.09□□□□□ -1.59
VIM-207ENST00000495528 MGMTP16455 207 aa5.09□□□□□ -1.59
VIM-207ENST00000495528 ELK1P19419 428 aa5.09□□□□□ -1.59
VIM-207ENST00000495528 GABRR1P24046 479 aa5.09□□□□□ -1.59
VIM-207ENST00000495528 PRDX2P32119 198 aa5.09□□□□□ -1.59
VIM-207ENST00000495528 GABRA2P47869 451 aa5.09□□□□□ -1.59
VIM-207ENST00000495528 CAPZA1P52907 286 aa5.09□□□□□ -1.59
VIM-207ENST00000495528 ERVK11-1P61568 191 aa5.09□□□□□ -1.59
VIM-207ENST00000495528 UNC119Q13432 240 aa5.09□□□□□ -1.59
VIM-207ENST00000495528 PIGYQ3MUY2 71 aa5.09□□□□□ -1.59
VIM-207ENST00000495528 LRRC10Q5BKY1 277 aa5.09□□□□□ -1.59
VIM-207ENST00000495528 ATAD3CQ5T2N8 411 aa5.09□□□□□ -1.59
VIM-207ENST00000495528 GFI1BQ5VTD9 330 aa5.09□□□□□ -1.59
VIM-207ENST00000495528 STUMQ69YW2 141 aa5.09□□□□□ -1.59
VIM-207ENST00000495528 ELP2Q6IA86 826 aa5.09□□□□□ -1.59
VIM-207ENST00000495528 C11orf88Q6PI97 169 aa5.09□□□□□ -1.59
VIM-207ENST00000495528 ACP7Q6ZNF0 438 aa5.09□□□□□ -1.59
VIM-207ENST00000495528 OR2W3Q7Z3T1 314 aa5.09□□□□□ -1.59
VIM-207ENST00000495528 TRPT1Q86TN4 253 aaKnown RBP5.09□□□□□ -1.59
VIM-207ENST00000495528 CHST4Q8NCG5 386 aa5.09□□□□□ -1.59
VIM-207ENST00000495528 OR2T6Q8NHC8 308 aa5.09□□□□□ -1.59
VIM-207ENST00000495528 C8orf46Q8TAG6 207 aa5.09□□□□□ -1.59
VIM-207ENST00000495528 PIFOQ8TCI5 191 aa5.09□□□□□ -1.59
VIM-207ENST00000495528 S100A16Q96FQ6 103 aaKnown RBP5.09□□□□□ -1.59
VIM-207ENST00000495528 NRIP2Q9BQI9 281 aa5.09□□□□□ -1.59
VIM-207ENST00000495528 URM1Q9BTM9 101 aaKnown RBP5.09□□□□□ -1.59
VIM-207ENST00000495528 CST11Q9H112 138 aa5.09□□□□□ -1.59
VIM-207ENST00000495528 MIXL1Q9H2W2 232 aa5.09□□□□□ -1.59
VIM-207ENST00000495528 METTL8Q9H825 291 aaKnown RBP5.09□□□□□ -1.59
VIM-207ENST00000495528 RASL12Q9NYN1 266 aa5.09□□□□□ -1.59
VIM-207ENST00000495528 TCF19Q9Y242 345 aa5.09□□□□□ -1.59
VIM-207ENST00000495528 ST3GAL6Q9Y274 331 aa5.09□□□□□ -1.59
VIM-207ENST00000495528 MRPS7Q9Y2R9 242 aaKnown RBP5.09□□□□□ -1.59
VIM-207ENST00000495528 DNAH9Q9NYC9 4486 aa5.08□□□□□ -1.6
VIM-207ENST00000495528 TRAV18A0A075B6X5 111 aa5.08□□□□□ -1.6
VIM-207ENST00000495528 A0A0A6YYD4 124 aa5.08□□□□□ -1.6
VIM-207ENST00000495528 METTL21EPA6NDL7 271 aa5.08□□□□□ -1.6
VIM-207ENST00000495528 RFPL4AA6NLU0 287 aa5.08□□□□□ -1.6
VIM-207ENST00000495528 OR2AT4A6NND4 320 aa5.08□□□□□ -1.6
VIM-207ENST00000495528 RFPL4AL1F8VTS6 287 aa5.08□□□□□ -1.6
VIM-207ENST00000495528 M0R1W7 72 aa5.08□□□□□ -1.6
VIM-207ENST00000495528 GEMIN2O14893 280 aaKnown RBP5.08□□□□□ -1.6
VIM-207ENST00000495528 CHST1O43916 411 aa5.08□□□□□ -1.6
VIM-207ENST00000495528 APOA1P02647 267 aa5.08□□□□□ -1.6
VIM-207ENST00000495528 AMBPP02760 352 aa5.08□□□□□ -1.6
VIM-207ENST00000495528 EIF4EP06730 217 aaKnown RBP5.08□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms