RNA–Protein interactions for RNA: ENST00000494748.1

SDF4-207, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 3,516 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-207ENST00000494748 ZDHHC16Q969W1 377 aa12.9□□□□□ -0.34
SDF4-207ENST00000494748 APOBEC3DQ96AK3 386 aaPredicted RBP12.9□□□□□ -0.34
SDF4-207ENST00000494748 MS4A10Q96PG2 267 aa12.9□□□□□ -0.34
SDF4-207ENST00000494748 SRFP11831 508 aa12.89□□□□□ -0.35
SDF4-207ENST00000494748 COMPP49747 757 aaPredicted RBP12.89□□□□□ -0.35
SDF4-207ENST00000494748 GFRA1P56159 465 aa12.89□□□□□ -0.35
SDF4-207ENST00000494748 SELENOTP62341 195 aa12.89□□□□□ -0.35
SDF4-207ENST00000494748 FAM53AQ6NSI3 398 aaPredicted RBP12.89□□□□□ -0.35
SDF4-207ENST00000494748 MRPL52Q86TS9 123 aaKnown RBP12.89□□□□□ -0.35
SDF4-207ENST00000494748 POM121L2Q96KW2 1035 aa12.89□□□□□ -0.35
SDF4-207ENST00000494748 C20orf144Q9BQM9 153 aa12.89□□□□□ -0.35
SDF4-207ENST00000494748 MBNL3Q9NUK0 354 aaKnown RBP12.89□□□□□ -0.35
SDF4-207ENST00000494748 KCNS2Q9ULS6 477 aa12.89□□□□□ -0.35
SDF4-207ENST00000494748 ODAMA1E959 279 aa12.89□□□□□ -0.35
SDF4-207ENST00000494748 PINLYPA6NC86 204 aa12.89□□□□□ -0.35
SDF4-207ENST00000494748 LRRC30A6NM36 301 aa12.89□□□□□ -0.35
SDF4-207ENST00000494748 ZG16O60844 167 aa12.89□□□□□ -0.35
SDF4-207ENST00000494748 IRF2P14316 349 aa12.89□□□□□ -0.35
SDF4-207ENST00000494748 RPS16P62249 146 aaKnown RBP12.89□□□□□ -0.35
SDF4-207ENST00000494748 GAGE1Q13065 139 aa12.89□□□□□ -0.35
SDF4-207ENST00000494748 SDSLQ96GA7 329 aa12.89□□□□□ -0.35
SDF4-207ENST00000494748 MRPS18CQ9Y3D5 142 aaKnown RBP12.89□□□□□ -0.35
SDF4-207ENST00000494748 TPRP12270 2363 aaKnown RBP12.89□□□□□ -0.35
SDF4-207ENST00000494748 COX5AP20674 150 aa12.89□□□□□ -0.35
SDF4-207ENST00000494748 G6PCP35575 357 aa12.89□□□□□ -0.35
SDF4-207ENST00000494748 RPL29P47914 159 aaKnown RBP12.89□□□□□ -0.35
SDF4-207ENST00000494748 GCSAMLQ5JQS6 135 aa12.89□□□□□ -0.35
SDF4-207ENST00000494748 WDR86Q86TI4 376 aa12.89□□□□□ -0.35
SDF4-207ENST00000494748 DOCK10Q96BY6 2186 aa12.89□□□□□ -0.35
SDF4-207ENST00000494748 IGKV3D-15A0A087WSY6 115 aa12.88□□□□□ -0.35
SDF4-207ENST00000494748 PDGFBP01127 241 aaPredicted RBP12.88□□□□□ -0.35
SDF4-207ENST00000494748 ESDP10768 282 aa12.88□□□□□ -0.35
SDF4-207ENST00000494748 OR3A1P47881 315 aa12.88□□□□□ -0.35
SDF4-207ENST00000494748 TMEM249Q2WGJ8 235 aa12.88□□□□□ -0.35
SDF4-207ENST00000494748 LINC00470Q9BZP3 86 aa12.88□□□□□ -0.35
SDF4-207ENST00000494748 TMEM106BQ9NUM4 274 aa12.88□□□□□ -0.35
SDF4-207ENST00000494748 YLPM1P49750 1951 aaKnown RBP12.88□□□□□ -0.35
SDF4-207ENST00000494748 BMP5P22003 454 aa12.88□□□□□ -0.35
SDF4-207ENST00000494748 CD82P27701 267 aa12.88□□□□□ -0.35
SDF4-207ENST00000494748 Q0VFX4 171 aa12.88□□□□□ -0.35
SDF4-207ENST00000494748 SGCZQ96LD1 299 aa12.88□□□□□ -0.35
SDF4-207ENST00000494748 WIPI2Q9Y4P8 454 aa12.88□□□□□ -0.35
SDF4-207ENST00000494748 GRIFINA4D1Z8 144 aa12.87□□□□□ -0.35
SDF4-207ENST00000494748 TNFSF13O75888 250 aa12.87□□□□□ -0.35
SDF4-207ENST00000494748 NDUFB4O95168 129 aa12.87□□□□□ -0.35
SDF4-207ENST00000494748 MOB1BQ7L9L4 216 aa12.87□□□□□ -0.35
SDF4-207ENST00000494748 LRP11Q86VZ4 500 aa12.87□□□□□ -0.35
SDF4-207ENST00000494748 PKIBQ9C010 78 aa12.87□□□□□ -0.35
SDF4-207ENST00000494748 IL17BQ9UHF5 180 aa12.87□□□□□ -0.35
SDF4-207ENST00000494748 TET2Q6N021 2002 aaPredicted RBP12.87□□□□□ -0.35
SDF4-207ENST00000494748 AHCTF1Q8WYP5 2266 aa12.87□□□□□ -0.35
SDF4-207ENST00000494748 OR2H2O95918 312 aa12.87□□□□□ -0.35
SDF4-207ENST00000494748 RPLP1P05386 114 aaKnown RBP12.87□□□□□ -0.35
SDF4-207ENST00000494748 BRS3P32247 399 aa12.87□□□□□ -0.35
SDF4-207ENST00000494748 CDKN1AP38936 164 aa12.87□□□□□ -0.35
SDF4-207ENST00000494748 SFRP2Q96HF1 295 aa12.87□□□□□ -0.35
SDF4-207ENST00000494748 PDE6DO43924 150 aa12.87□□□□□ -0.35
SDF4-207ENST00000494748 EPHA8P29322 1005 aaPredicted RBP12.87□□□□□ -0.35
SDF4-207ENST00000494748 CDC34P49427 236 aaPredicted RBP12.87□□□□□ -0.35
SDF4-207ENST00000494748 GNG3P63215 75 aa12.87□□□□□ -0.35
SDF4-207ENST00000494748 NUFIP2Q7Z417 695 aaKnown RBP12.87□□□□□ -0.35
SDF4-207ENST00000494748 SGMS2Q8NHU3 365 aa12.87□□□□□ -0.35
SDF4-207ENST00000494748 RNF114Q9Y508 228 aa12.87□□□□□ -0.35
SDF4-207ENST00000494748 OR5B21A6NL26 309 aa12.86□□□□□ -0.35
SDF4-207ENST00000494748 M0QZK8 103 aa12.86□□□□□ -0.35
SDF4-207ENST00000494748 S1PR2O95136 353 aa12.86□□□□□ -0.35
SDF4-207ENST00000494748 KRASP01116 189 aa12.86□□□□□ -0.35
SDF4-207ENST00000494748 ERVK11-1P61568 191 aa12.86□□□□□ -0.35
SDF4-207ENST00000494748 RAB30Q15771 203 aa12.86□□□□□ -0.35
SDF4-207ENST00000494748 MIEN1Q9BRT3 115 aa12.86□□□□□ -0.35
SDF4-207ENST00000494748 KCNIP2Q9NS61 270 aa12.86□□□□□ -0.35
SDF4-207ENST00000494748 SIRPB1O00241 398 aa12.86□□□□□ -0.35
SDF4-207ENST00000494748 MRPS11P82912 194 aaKnown RBP12.86□□□□□ -0.35
SDF4-207ENST00000494748 CST9LP1Q5W188 147 aa12.86□□□□□ -0.35
SDF4-207ENST00000494748 CMTM2Q8TAZ6 248 aa12.86□□□□□ -0.35
SDF4-207ENST00000494748 HCFC1P51610 2035 aa12.86□□□□□ -0.35
SDF4-207ENST00000494748 TRAV38-1A0A0B4J264 116 aa12.85□□□□□ -0.35
SDF4-207ENST00000494748 UBE2G2P60604 165 aa12.85□□□□□ -0.35
SDF4-207ENST00000494748 ZNF645Q8N7E2 425 aa12.85□□□□□ -0.35
SDF4-207ENST00000494748 OR10P1Q8NGE3 313 aa12.85□□□□□ -0.35
SDF4-207ENST00000494748 DTD1Q8TEA8 209 aa12.85□□□□□ -0.35
SDF4-207ENST00000494748 RAB1CQ92928 201 aa12.85□□□□□ -0.35
SDF4-207ENST00000494748 GOLT1BQ9Y3E0 138 aa12.85□□□□□ -0.35
SDF4-207ENST00000494748 DOCK7Q96N67 2140 aa12.85□□□□□ -0.35
SDF4-207ENST00000494748 C15orf62A8K5M9 175 aa12.85□□□□□ -0.35
SDF4-207ENST00000494748 SERPINA7P05543 415 aa12.85□□□□□ -0.35
SDF4-207ENST00000494748 SELEP16581 610 aa12.85□□□□□ -0.35
SDF4-207ENST00000494748 OR2Y1Q8NGV0 311 aa12.85□□□□□ -0.35
SDF4-207ENST00000494748 LPAR2Q9HBW0 351 aa12.85□□□□□ -0.35
SDF4-207ENST00000494748 MPC1Q9Y5U8 109 aa12.85□□□□□ -0.35
SDF4-207ENST00000494748 C17orf98A8MV24 154 aa12.85□□□□□ -0.35
SDF4-207ENST00000494748 F2Z2F3 143 aa12.85□□□□□ -0.35
SDF4-207ENST00000494748 MRPL33O75394 65 aaKnown RBP12.85□□□□□ -0.35
SDF4-207ENST00000494748 SYNGR4O95473 234 aa12.85□□□□□ -0.35
SDF4-207ENST00000494748 ZNF816Q0VGE8 651 aaPredicted RBP12.85□□□□□ -0.35
SDF4-207ENST00000494748 ZNF705AQ6ZN79 300 aaPredicted RBP12.85□□□□□ -0.35
SDF4-207ENST00000494748 Q8N976 141 aa12.85□□□□□ -0.35
SDF4-207ENST00000494748 TRAPPC2LQ9UL33 140 aa12.85□□□□□ -0.35
SDF4-207ENST00000494748 ZNF705FA8MVS1 300 aaPredicted RBP12.84□□□□□ -0.35
SDF4-207ENST00000494748 CRYABP02511 175 aaKnown RBP12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms