RNA–Protein interactions for RNA: ENST00000493945.5

ACTB-213, Transcript of actin beta, humanhuman

TSL 5

Gene ACTB, Length 1,236 nt, Biotype retained intron, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-213ENST00000493945 ZNF818PQ6ZRF7 136 aa12.05□□□□□ -0.48
ACTB-213ENST00000493945 C16orf82Q7Z2V1 217 aa12.05□□□□□ -0.48
ACTB-213ENST00000493945 THNSL2Q86YJ6 484 aa12.05□□□□□ -0.48
ACTB-213ENST00000493945 SGPP2Q8IWX5 399 aa12.05□□□□□ -0.48
ACTB-213ENST00000493945 CENPSQ8N2Z9 138 aa12.05□□□□□ -0.48
ACTB-213ENST00000493945 OR2T10Q8NGZ9 312 aa12.05□□□□□ -0.48
ACTB-213ENST00000493945 C22orf15Q8WYQ4 148 aa12.05□□□□□ -0.48
ACTB-213ENST00000493945 SSX3Q99909 188 aa12.05□□□□□ -0.48
ACTB-213ENST00000493945 MRPL20Q9BYC9 149 aaKnown RBP12.05□□□□□ -0.48
ACTB-213ENST00000493945 FAM212BQ9NTI7 297 aaPredicted RBP12.05□□□□□ -0.48
ACTB-213ENST00000493945 SLC35D1Q9NTN3 355 aa12.05□□□□□ -0.48
ACTB-213ENST00000493945 C1RLQ9NZP8 487 aa12.05□□□□□ -0.48
ACTB-213ENST00000493945 KCNIP3Q9Y2W7 256 aa12.05□□□□□ -0.48
ACTB-213ENST00000493945 ZNF469Q96JG9 3925 aaPredicted RBP12.05□□□□□ -0.48
ACTB-213ENST00000493945 M0QZK8 103 aa12.04□□□□□ -0.48
ACTB-213ENST00000493945 PTTG1O95997 202 aa12.04□□□□□ -0.48
ACTB-213ENST00000493945 GNRHRP30968 328 aa12.04□□□□□ -0.48
ACTB-213ENST00000493945 DUTP33316 252 aaKnown RBP12.04□□□□□ -0.48
ACTB-213ENST00000493945 SRPXP78539 464 aa12.04□□□□□ -0.48
ACTB-213ENST00000493945 BAMBIQ13145 260 aa12.04□□□□□ -0.48
ACTB-213ENST00000493945 PHLDA2Q53GA4 152 aa12.04□□□□□ -0.48
ACTB-213ENST00000493945 UTF1Q5T230 341 aa12.04□□□□□ -0.48
ACTB-213ENST00000493945 PLET1Q6UQ28 207 aa12.04□□□□□ -0.48
ACTB-213ENST00000493945 Q6YL49 198 aa12.04□□□□□ -0.48
ACTB-213ENST00000493945 TMED4Q7Z7H5 227 aa12.04□□□□□ -0.48
ACTB-213ENST00000493945 OR8H1Q8NGG4 311 aa12.04□□□□□ -0.48
ACTB-213ENST00000493945 OR4C13Q8NGP0 309 aa12.04□□□□□ -0.48
ACTB-213ENST00000493945 RNF5Q99942 180 aa12.04□□□□□ -0.48
ACTB-213ENST00000493945 NABP2Q9BQ15 211 aa12.04□□□□□ -0.48
ACTB-213ENST00000493945 PRDM13Q9H4Q3 707 aa12.04□□□□□ -0.48
ACTB-213ENST00000493945 NUBP2Q9Y5Y2 271 aa12.04□□□□□ -0.48
ACTB-213ENST00000493945 H3BUX3 64 aa12.03□□□□□ -0.48
ACTB-213ENST00000493945 PLA2G10O15496 165 aa12.03□□□□□ -0.48
ACTB-213ENST00000493945 RBFOX2O43251 390 aaKnown RBP eCLIP12.03□□□□□ -0.481e-25■■■□□ 17.1
ACTB-213ENST00000493945 TNFSF12O43508 249 aa12.03□□□□□ -0.48
ACTB-213ENST00000493945 TCF21O43680 179 aa12.03□□□□□ -0.48
ACTB-213ENST00000493945 CREBL2O60519 120 aaPredicted RBP12.03□□□□□ -0.48
ACTB-213ENST00000493945 MOSP00540 346 aa12.03□□□□□ -0.48
ACTB-213ENST00000493945 SERPINE2P07093 398 aa12.03□□□□□ -0.48
ACTB-213ENST00000493945 RPA2P15927 270 aa12.03□□□□□ -0.48
ACTB-213ENST00000493945 TMEM11P17152 192 aa12.03□□□□□ -0.48
ACTB-213ENST00000493945 SLC6A1P30531 599 aa12.03□□□□□ -0.48
ACTB-213ENST00000493945 ERVK-16P61578 105 aa12.03□□□□□ -0.48
ACTB-213ENST00000493945 HABP2Q14520 560 aaPredicted RBP12.03□□□□□ -0.48
ACTB-213ENST00000493945 RGS21Q2M5E4 152 aa12.03□□□□□ -0.48
ACTB-213ENST00000493945 SIGLECL1Q8N7X8 197 aa12.03□□□□□ -0.48
ACTB-213ENST00000493945 OR5AN1Q8NGI8 311 aa12.03□□□□□ -0.48
ACTB-213ENST00000493945 OR51H1Q8NH63 302 aa12.03□□□□□ -0.48
ACTB-213ENST00000493945 FLYWCH2Q96CP2 140 aaKnown RBP12.03□□□□□ -0.48
ACTB-213ENST00000493945 TSNAXQ99598 290 aaKnown RBP12.03□□□□□ -0.48
ACTB-213ENST00000493945 ZNF251Q9BRH9 671 aa12.03□□□□□ -0.48
ACTB-213ENST00000493945 KIAA1456Q9P272 454 aa12.03□□□□□ -0.48
ACTB-213ENST00000493945 TBC1D24Q9ULP9 559 aa12.03□□□□□ -0.48
ACTB-213ENST00000493945 GPR132Q9UNW8 380 aa12.03□□□□□ -0.48
ACTB-213ENST00000493945 NSD1Q96L73 2696 aaPredicted RBP12.03□□□□□ -0.48
ACTB-213ENST00000493945 H0YJW9 148 aa12.02□□□□□ -0.49
ACTB-213ENST00000493945 MPPED1O15442 326 aa12.02□□□□□ -0.49
ACTB-213ENST00000493945 PGLYRP1O75594 196 aaPredicted RBP12.02□□□□□ -0.49
ACTB-213ENST00000493945 HRASP01112 189 aa12.02□□□□□ -0.49
ACTB-213ENST00000493945 IGKV1D-33P01593 117 aa12.02□□□□□ -0.49
ACTB-213ENST00000493945 IGKV1-33P01594 117 aa12.02□□□□□ -0.49
ACTB-213ENST00000493945 TCRBP04435 133 aa12.02□□□□□ -0.49
ACTB-213ENST00000493945 CT45A6P0DMU7 189 aa12.02□□□□□ -0.49
ACTB-213ENST00000493945 CT45A5P0DMU8 189 aa12.02□□□□□ -0.49
ACTB-213ENST00000493945 CT45A7P0DMV0 189 aa12.02□□□□□ -0.49
ACTB-213ENST00000493945 F2RP25116 425 aa12.02□□□□□ -0.49
ACTB-213ENST00000493945 CCR6P51684 374 aa12.02□□□□□ -0.49
ACTB-213ENST00000493945 RPL15P61313 204 aaKnown RBP12.02□□□□□ -0.49
ACTB-213ENST00000493945 TMEM128Q5BJH2 165 aa12.02□□□□□ -0.49
ACTB-213ENST00000493945 TBC1D26Q86UD7 250 aa12.02□□□□□ -0.49
ACTB-213ENST00000493945 BCL6BQ8N143 479 aaPredicted RBP12.02□□□□□ -0.49
ACTB-213ENST00000493945 OSR1Q8TAX0 266 aaPredicted RBP12.02□□□□□ -0.49
ACTB-213ENST00000493945 C20orf85Q9H1P6 137 aa12.02□□□□□ -0.49
ACTB-213ENST00000493945 VPREB3Q9UKI3 123 aa12.02□□□□□ -0.49
ACTB-213ENST00000493945 TCF19Q9Y242 345 aa12.02□□□□□ -0.49
ACTB-213ENST00000493945 MTORP42345 2549 aa12.01□□□□□ -0.49
ACTB-213ENST00000493945 H0Y980 276 aa12.01□□□□□ -0.49
ACTB-213ENST00000493945 SHOXO15266 292 aa12.01□□□□□ -0.49
ACTB-213ENST00000493945 FCGR3BO75015 233 aa12.01□□□□□ -0.49
ACTB-213ENST00000493945 VENTXO95231 258 aa12.01□□□□□ -0.49
ACTB-213ENST00000493945 SPDEFO95238 335 aa12.01□□□□□ -0.49
ACTB-213ENST00000493945 SNRNP70P08621 437 aaKnown RBP12.01□□□□□ -0.49
ACTB-213ENST00000493945 IER3P46695 156 aa12.01□□□□□ -0.49
ACTB-213ENST00000493945 LGALS7P47929 136 aa12.01□□□□□ -0.49
ACTB-213ENST00000493945 DHODHQ02127 395 aa12.01□□□□□ -0.49
ACTB-213ENST00000493945 SPAG16Q8N0X2 631 aa12.01□□□□□ -0.49
ACTB-213ENST00000493945 DRAXINQ8NBI3 349 aaPredicted RBP12.01□□□□□ -0.49
ACTB-213ENST00000493945 VSTM2AQ8TAG5 236 aa12.01□□□□□ -0.49
ACTB-213ENST00000493945 C17orf50Q8WW18 174 aa12.01□□□□□ -0.49
ACTB-213ENST00000493945 CFHR4Q92496 578 aa12.01□□□□□ -0.49
ACTB-213ENST00000493945 HARBI1Q96MB7 349 aa12.01□□□□□ -0.49
ACTB-213ENST00000493945 C5orf66Q9H5L9 145 aa12.01□□□□□ -0.49
ACTB-213ENST00000493945 NAA60Q9H7X0 242 aa12.01□□□□□ -0.49
ACTB-213ENST00000493945 NUDT15Q9NV35 164 aa12.01□□□□□ -0.49
ACTB-213ENST00000493945 COMMD9Q9P000 198 aa12.01□□□□□ -0.49
ACTB-213ENST00000493945 C3orf85A0A1B0GTC6 90 aa12□□□□□ -0.49
ACTB-213ENST00000493945 CLDN34H7C241 214 aa12□□□□□ -0.49
ACTB-213ENST00000493945 TRIM77I1YAP6 450 aa12□□□□□ -0.49
ACTB-213ENST00000493945 ARPC1BO15143 372 aaKnown RBP12□□□□□ -0.49
ACTB-213ENST00000493945 HOXA3O43365 443 aaPredicted RBP12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms