RNA–Protein interactions for RNA: ENST00000493916.1

SNIP1-203, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 4

Gene SNIP1, Length 546 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-203ENST00000493916 CRIP2P52943 208 aaPredicted RBP17.72■□□□□ 0.43
SNIP1-203ENST00000493916 NDPQ00604 133 aa17.72■□□□□ 0.43
SNIP1-203ENST00000493916 PLGLAQ15195 96 aa17.72■□□□□ 0.43
SNIP1-203ENST00000493916 PSG5Q15238 335 aa17.72■□□□□ 0.43
SNIP1-203ENST00000493916 UBE2NLQ5JXB2 153 aa17.72■□□□□ 0.43
SNIP1-203ENST00000493916 C18orf65Q6ZTR6 163 aa17.72■□□□□ 0.43
SNIP1-203ENST00000493916 ZNF695Q8IW36 515 aa17.72■□□□□ 0.43
SNIP1-203ENST00000493916 SLC25A46Q96AG3 418 aa17.72■□□□□ 0.43
SNIP1-203ENST00000493916 FLYWCH2Q96CP2 140 aaKnown RBP17.72■□□□□ 0.43
SNIP1-203ENST00000493916 AUNIPQ9H7T9 357 aa17.72■□□□□ 0.43
SNIP1-203ENST00000493916 NUDT19A8MXV4 375 aa17.71■□□□□ 0.43
SNIP1-203ENST00000493916 CDX1P47902 265 aaPredicted RBP17.71■□□□□ 0.43
SNIP1-203ENST00000493916 THBS3P49746 956 aa17.71■□□□□ 0.43
SNIP1-203ENST00000493916 RPS16P62249 146 aaKnown RBP17.71■□□□□ 0.43
SNIP1-203ENST00000493916 OXLD1Q5BKU9 147 aa17.71■□□□□ 0.43
SNIP1-203ENST00000493916 C8orf86Q6ZUL3 223 aa17.71■□□□□ 0.43
SNIP1-203ENST00000493916 LINC00482Q8N8I6 264 aa17.71■□□□□ 0.43
SNIP1-203ENST00000493916 KCTD12Q96CX2 325 aaKnown RBP17.71■□□□□ 0.43
SNIP1-203ENST00000493916 ADTRPQ96IZ2 230 aa17.71■□□□□ 0.43
SNIP1-203ENST00000493916 METTL1Q9UBP6 276 aaKnown RBP17.71■□□□□ 0.43
SNIP1-203ENST00000493916 OR2W1Q9Y3N9 320 aa17.71■□□□□ 0.43
SNIP1-203ENST00000493916 TRAV41A0A0B4J266 112 aa17.7■□□□□ 0.42
SNIP1-203ENST00000493916 G3V318 75 aa17.7■□□□□ 0.42
SNIP1-203ENST00000493916 XRCC3O43542 346 aa17.7■□□□□ 0.42
SNIP1-203ENST00000493916 HLA-DQB1P01920 261 aa17.7■□□□□ 0.42
SNIP1-203ENST00000493916 NFYAP23511 347 aaPredicted RBP17.7■□□□□ 0.42
SNIP1-203ENST00000493916 NCS1P62166 190 aa17.7■□□□□ 0.42
SNIP1-203ENST00000493916 CX3CL1P78423 397 aa17.7■□□□□ 0.42
SNIP1-203ENST00000493916 C19orf54Q5BKX5 351 aa17.7■□□□□ 0.42
SNIP1-203ENST00000493916 LCNL1Q6ZST4 164 aa17.7■□□□□ 0.42
SNIP1-203ENST00000493916 HOGA1Q86XE5 327 aa17.7■□□□□ 0.42
SNIP1-203ENST00000493916 ZNF645Q8N7E2 425 aa17.7■□□□□ 0.42
SNIP1-203ENST00000493916 MYOZ3Q8TDC0 251 aa17.7■□□□□ 0.42
SNIP1-203ENST00000493916 S100A16Q96FQ6 103 aaKnown RBP17.7■□□□□ 0.42
SNIP1-203ENST00000493916 WSB1Q9Y6I7 421 aa17.7■□□□□ 0.42
SNIP1-203ENST00000493916 FCN1O00602 326 aa17.69■□□□□ 0.42
SNIP1-203ENST00000493916 IGLV1-40P01703 118 aa17.69■□□□□ 0.42
SNIP1-203ENST00000493916 RRASP10301 218 aa17.69■□□□□ 0.42
SNIP1-203ENST00000493916 DUTP33316 252 aaKnown RBP17.69■□□□□ 0.42
SNIP1-203ENST00000493916 MYCNOSP40205 109 aa17.69■□□□□ 0.42
SNIP1-203ENST00000493916 LGALS7P47929 136 aa17.69■□□□□ 0.42
SNIP1-203ENST00000493916 LUMP51884 338 aaPredicted RBP17.69■□□□□ 0.42
SNIP1-203ENST00000493916 CBX3Q13185 183 aa17.69■□□□□ 0.42
SNIP1-203ENST00000493916 RTL8BQ17RB0 113 aa17.69■□□□□ 0.42
SNIP1-203ENST00000493916 MRPL41Q8IXM3 137 aaKnown RBP17.69■□□□□ 0.42
SNIP1-203ENST00000493916 MINDY2Q8NBR6 621 aa17.69■□□□□ 0.42
SNIP1-203ENST00000493916 BEST4Q8NFU0 473 aa17.69■□□□□ 0.42
SNIP1-203ENST00000493916 DDB2Q92466 427 aa17.69■□□□□ 0.42
SNIP1-203ENST00000493916 RCC1LQ96I51 464 aaKnown RBP17.69■□□□□ 0.42
SNIP1-203ENST00000493916 FBXO7Q9Y3I1 522 aa17.69■□□□□ 0.42
SNIP1-203ENST00000493916 TUSC2O75896 110 aa17.68■□□□□ 0.42
SNIP1-203ENST00000493916 SLC22A5O76082 557 aa17.68■□□□□ 0.42
SNIP1-203ENST00000493916 IGLL1P15814 213 aa17.68■□□□□ 0.42
SNIP1-203ENST00000493916 CBX5P45973 191 aa17.68■□□□□ 0.42
SNIP1-203ENST00000493916 VBP1P61758 197 aa17.68■□□□□ 0.42
SNIP1-203ENST00000493916 TMEM177Q53S58 311 aa17.68■□□□□ 0.42
SNIP1-203ENST00000493916 ZNF562Q6V9R5 426 aa17.68■□□□□ 0.42
SNIP1-203ENST00000493916 GVQW1Q8N7I0 195 aa17.68■□□□□ 0.42
SNIP1-203ENST00000493916 TCTEX1D1Q8N7M0 179 aa17.68■□□□□ 0.42
SNIP1-203ENST00000493916 SAMD12Q8N8I0 201 aa17.68■□□□□ 0.42
SNIP1-203ENST00000493916 P2RX4Q99571 388 aa17.68■□□□□ 0.42
SNIP1-203ENST00000493916 DNAH3Q8TD57 4116 aa17.67■□□□□ 0.42
SNIP1-203ENST00000493916 PRKDCP78527 4128 aaKnown RBP17.67■□□□□ 0.42
SNIP1-203ENST00000493916 SLC25A17O43808 307 aa17.67■□□□□ 0.42
SNIP1-203ENST00000493916 DUS4LO95620 317 aaKnown RBP17.67■□□□□ 0.42
SNIP1-203ENST00000493916 IGLV2-23P01705 113 aa17.67■□□□□ 0.42
SNIP1-203ENST00000493916 EGR2P11161 476 aaPredicted RBP17.67■□□□□ 0.42
SNIP1-203ENST00000493916 ARPC4P59998 168 aa17.67■□□□□ 0.42
SNIP1-203ENST00000493916 BVESQ8NE79 360 aa17.67■□□□□ 0.42
SNIP1-203ENST00000493916 C4orf3Q8WVX3 66 aa17.67■□□□□ 0.42
SNIP1-203ENST00000493916 HARBI1Q96MB7 349 aa17.67■□□□□ 0.42
SNIP1-203ENST00000493916 TPSG1Q9NRR2 321 aa17.67■□□□□ 0.42
SNIP1-203ENST00000493916 IGKV1D-13A0A0B4J2D9 117 aa17.66■□□□□ 0.42
SNIP1-203ENST00000493916 LINC00473A8K010 186 aa17.66■□□□□ 0.42
SNIP1-203ENST00000493916 GABARAPO95166 117 aa17.66■□□□□ 0.42
SNIP1-203ENST00000493916 CA2P00918 260 aa17.66■□□□□ 0.42
SNIP1-203ENST00000493916 IGKV1-13P0DP09 117 aa17.66■□□□□ 0.42
SNIP1-203ENST00000493916 ECSCRQ19T08 205 aa17.66■□□□□ 0.42
SNIP1-203ENST00000493916 TMEM69Q5SWH9 247 aa17.66■□□□□ 0.42
SNIP1-203ENST00000493916 ANKRD13BQ86YJ7 626 aa17.66■□□□□ 0.42
SNIP1-203ENST00000493916 RAX2Q96IS3 184 aa17.66■□□□□ 0.42
SNIP1-203ENST00000493916 CLCC1Q96S66 551 aa17.66■□□□□ 0.42
SNIP1-203ENST00000493916 MRPS26Q9BYN8 205 aaKnown RBP17.66■□□□□ 0.42
SNIP1-203ENST00000493916 RBMX2Q9Y388 322 aaKnown RBP17.66■□□□□ 0.42
SNIP1-203ENST00000493916 NUBP2Q9Y5Y2 271 aa17.66■□□□□ 0.42
SNIP1-203ENST00000493916 IGLV2-14P01704 120 aa17.65■□□□□ 0.42
SNIP1-203ENST00000493916 CRYGBP07316 175 aa17.65■□□□□ 0.42
SNIP1-203ENST00000493916 PTHLHP12272 177 aa17.65■□□□□ 0.42
SNIP1-203ENST00000493916 TMEM267Q0VDI3 215 aaPredicted RBP17.65■□□□□ 0.42
SNIP1-203ENST00000493916 KIAA0141Q14154 515 aaPredicted RBP17.65■□□□□ 0.42
SNIP1-203ENST00000493916 TMEM65Q6PI78 240 aa17.65■□□□□ 0.42
SNIP1-203ENST00000493916 PPP1R27Q86WC6 154 aa17.65■□□□□ 0.42
SNIP1-203ENST00000493916 SNAPC3Q92966 411 aa17.65■□□□□ 0.42
SNIP1-203ENST00000493916 CMTM3Q96MX0 182 aa17.65■□□□□ 0.42
SNIP1-203ENST00000493916 KLK15Q9H2R5 256 aa17.65■□□□□ 0.42
SNIP1-203ENST00000493916 NECAP2Q9NVZ3 263 aa17.65■□□□□ 0.42
SNIP1-203ENST00000493916 FOXA2Q9Y261 457 aaPredicted RBP17.65■□□□□ 0.42
SNIP1-203ENST00000493916 J3QRK9 145 aa17.64■□□□□ 0.41
SNIP1-203ENST00000493916 CCL24O00175 119 aa17.64■□□□□ 0.41
SNIP1-203ENST00000493916 SHOXO15266 292 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms