RNA–Protein interactions for RNA: ENST00000493886.5

VCP-207, Transcript of valosin containing protein, humanhuman

TSL 2

Gene VCP, Length 2,942 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-207ENST00000493886 HMGN3Q15651 99 aa11.57□□□□□ -0.56
VCP-207ENST00000493886 TIMM23BQ5SRD1 257 aa11.57□□□□□ -0.56
VCP-207ENST00000493886 ACP7Q6ZNF0 438 aa11.57□□□□□ -0.56
VCP-207ENST00000493886 OR5D13Q8NGL4 314 aa11.57□□□□□ -0.56
VCP-207ENST00000493886 MKRN2OSH3BPM6 223 aa11.56□□□□□ -0.56
VCP-207ENST00000493886 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.56□□□□□ -0.56
VCP-207ENST00000493886 SLC25A17O43808 307 aa11.56□□□□□ -0.56
VCP-207ENST00000493886 FOLR2P14207 255 aa11.56□□□□□ -0.56
VCP-207ENST00000493886 LMO1P25800 156 aa11.56□□□□□ -0.56
VCP-207ENST00000493886 RAB5CP51148 216 aa11.56□□□□□ -0.56
VCP-207ENST00000493886 TESK1Q15569 626 aa11.56□□□□□ -0.56
VCP-207ENST00000493886 KRTCAP3Q53RY4 240 aa11.56□□□□□ -0.56
VCP-207ENST00000493886 NUDT11Q96G61 164 aa11.56□□□□□ -0.56
VCP-207ENST00000493886 STRAPQ9Y3F4 350 aaKnown RBP11.56□□□□□ -0.56
VCP-207ENST00000493886 VDAC1P21796 283 aa11.56□□□□□ -0.56
VCP-207ENST00000493886 HNF4GQ14541 408 aa11.56□□□□□ -0.56
VCP-207ENST00000493886 NMSQ5H8A3 153 aa11.56□□□□□ -0.56
VCP-207ENST00000493886 ZNF343Q6P1L6 599 aa11.56□□□□□ -0.56
VCP-207ENST00000493886 IL22RA2Q969J5 263 aa11.56□□□□□ -0.56
VCP-207ENST00000493886 PACRGQ96M98 296 aaPredicted RBP11.56□□□□□ -0.56
VCP-207ENST00000493886 M0R1B8 84 aa11.56□□□□□ -0.56
VCP-207ENST00000493886 CHST1O43916 411 aa11.56□□□□□ -0.56
VCP-207ENST00000493886 RPS23P62266 143 aaKnown RBP11.56□□□□□ -0.56
VCP-207ENST00000493886 TMEM267Q0VDI3 215 aaPredicted RBP11.56□□□□□ -0.56
VCP-207ENST00000493886 ZNF266Q14584 549 aa11.56□□□□□ -0.56
VCP-207ENST00000493886 FAM57AQ8TBR7 257 aa11.56□□□□□ -0.56
VCP-207ENST00000493886 NDUFAF3Q9BU61 184 aa11.56□□□□□ -0.56
VCP-207ENST00000493886 EGLN1Q9GZT9 426 aa11.56□□□□□ -0.56
VCP-207ENST00000493886 A0A0G2JRQ6 117 aa11.55□□□□□ -0.56
VCP-207ENST00000493886 TMEM30CPA0ZSE6 113 aa11.55□□□□□ -0.56
VCP-207ENST00000493886 IFITM10A6NMD0 228 aa11.55□□□□□ -0.56
VCP-207ENST00000493886 PHOX2AO14813 284 aa11.55□□□□□ -0.56
VCP-207ENST00000493886 OR2C1O95371 312 aa11.55□□□□□ -0.56
VCP-207ENST00000493886 AGAP20933 346 aa11.55□□□□□ -0.56
VCP-207ENST00000493886 GAGE1Q13065 139 aa11.55□□□□□ -0.56
VCP-207ENST00000493886 MSMPQ1L6U9 139 aa11.55□□□□□ -0.56
VCP-207ENST00000493886 ODF3L1Q8IXM7 274 aa11.55□□□□□ -0.56
VCP-207ENST00000493886 COMMD1Q8N668 190 aa11.55□□□□□ -0.56
VCP-207ENST00000493886 RAB24Q969Q5 203 aa11.55□□□□□ -0.56
VCP-207ENST00000493886 LYRM2Q9NU23 88 aaPredicted RBP11.55□□□□□ -0.56
VCP-207ENST00000493886 BOD1L1Q8NFC6 3051 aa11.55□□□□□ -0.56
VCP-207ENST00000493886 CLEC18AA5D8T8 446 aa11.55□□□□□ -0.56
VCP-207ENST00000493886 RBFOX3A6NFN3 312 aa11.55□□□□□ -0.56
VCP-207ENST00000493886 TGOLN2O43493 480 aa11.55□□□□□ -0.56
VCP-207ENST00000493886 IGLV2-14P01704 120 aa11.55□□□□□ -0.56
VCP-207ENST00000493886 RPS10P46783 165 aaKnown RBP11.55□□□□□ -0.56
VCP-207ENST00000493886 SPSB3Q6PJ21 355 aa11.55□□□□□ -0.56
VCP-207ENST00000493886 CLEC18CQ8NCF0 446 aa11.55□□□□□ -0.56
VCP-207ENST00000493886 SFXN3Q9BWM7 321 aa11.55□□□□□ -0.56
VCP-207ENST00000493886 C11orf1Q9H5F2 150 aa11.55□□□□□ -0.56
VCP-207ENST00000493886 RBM7Q9Y580 266 aaKnown RBP11.55□□□□□ -0.56
VCP-207ENST00000493886 MGAQ8IWI9 3026 aa11.54□□□□□ -0.56
VCP-207ENST00000493886 OPN1MWP04001 364 aa11.54□□□□□ -0.56
VCP-207ENST00000493886 OPN1MW2P0DN77 364 aa11.54□□□□□ -0.56
VCP-207ENST00000493886 OPN1MW3P0DN78 364 aa11.54□□□□□ -0.56
VCP-207ENST00000493886 TLE1Q04724 770 aa11.54□□□□□ -0.56
VCP-207ENST00000493886 MZT1Q08AG7 82 aa11.54□□□□□ -0.56
VCP-207ENST00000493886 LRP11Q86VZ4 500 aa11.54□□□□□ -0.56
VCP-207ENST00000493886 CYB561D1Q8N8Q1 229 aa11.54□□□□□ -0.56
VCP-207ENST00000493886 PRR7Q8TB68 274 aa11.54□□□□□ -0.56
VCP-207ENST00000493886 MUCL1Q96DR8 90 aa11.54□□□□□ -0.56
VCP-207ENST00000493886 ABHD17AQ96GS6 310 aa11.54□□□□□ -0.56
VCP-207ENST00000493886 PLEKHF2Q9H8W4 249 aa11.54□□□□□ -0.56
VCP-207ENST00000493886 KCNIP1Q9NZI2 227 aa11.54□□□□□ -0.56
VCP-207ENST00000493886 DUSP13Q9UII6 198 aa11.54□□□□□ -0.56
VCP-207ENST00000493886 A8MWP6 167 aa11.54□□□□□ -0.56
VCP-207ENST00000493886 SIAH2O43255 324 aa11.54□□□□□ -0.56
VCP-207ENST00000493886 PITX3O75364 302 aa11.54□□□□□ -0.56
VCP-207ENST00000493886 PTBP3O95758 552 aaKnown RBP11.54□□□□□ -0.56
VCP-207ENST00000493886 TFF1P04155 84 aa11.54□□□□□ -0.56
VCP-207ENST00000493886 CEACAM6P40199 344 aa11.54□□□□□ -0.56
VCP-207ENST00000493886 SMIM21Q3B7S5 101 aa11.54□□□□□ -0.56
VCP-207ENST00000493886 PDZD11Q5EBL8 140 aa11.54□□□□□ -0.56
VCP-207ENST00000493886 SLC35E4Q6ICL7 350 aa11.54□□□□□ -0.56
VCP-207ENST00000493886 OR2Z1Q8NG97 314 aa11.54□□□□□ -0.56
VCP-207ENST00000493886 GAR1Q9NY12 217 aaKnown RBP11.54□□□□□ -0.56
VCP-207ENST00000493886 RP1L1Q8IWN7 2480 aaPredicted RBP11.54□□□□□ -0.56
VCP-207ENST00000493886 H3BQ15 152 aa11.53□□□□□ -0.56
VCP-207ENST00000493886 SERPINE2P07093 398 aa11.53□□□□□ -0.56
VCP-207ENST00000493886 WNT2P09544 360 aa11.53□□□□□ -0.56
VCP-207ENST00000493886 PSG2P11465 335 aa11.53□□□□□ -0.56
VCP-207ENST00000493886 PLA2G5P39877 138 aa11.53□□□□□ -0.56
VCP-207ENST00000493886 AESQ08117 197 aa11.53□□□□□ -0.56
VCP-207ENST00000493886 FOXC1Q12948 553 aa11.53□□□□□ -0.56
VCP-207ENST00000493886 RAB39BQ96DA2 213 aa11.53□□□□□ -0.56
VCP-207ENST00000493886 ABHD14BQ96IU4 210 aa11.53□□□□□ -0.56
VCP-207ENST00000493886 GSX1Q9H4S2 264 aaPredicted RBP11.53□□□□□ -0.56
VCP-207ENST00000493886 KCNS2Q9ULS6 477 aa11.53□□□□□ -0.56
VCP-207ENST00000493886 PPP1R3CQ9UQK1 317 aa11.53□□□□□ -0.56
VCP-207ENST00000493886 CADP27708 2225 aa11.53□□□□□ -0.56
VCP-207ENST00000493886 SPTBN2O15020 2390 aa11.53□□□□□ -0.56
VCP-207ENST00000493886 CRYAAP02489 173 aa11.53□□□□□ -0.56
VCP-207ENST00000493886 OR3A1P47881 315 aa11.53□□□□□ -0.56
VCP-207ENST00000493886 FGF8P55075 233 aaPredicted RBP11.53□□□□□ -0.56
VCP-207ENST00000493886 OR1L1Q8NH94 360 aa11.53□□□□□ -0.56
VCP-207ENST00000493886 LRRC29Q8WV35 223 aa11.53□□□□□ -0.56
VCP-207ENST00000493886 COQ2Q96H96 371 aa11.53□□□□□ -0.56
VCP-207ENST00000493886 IFNL4K9M1U5 179 aa11.53□□□□□ -0.56
VCP-207ENST00000493886 IAPPP10997 89 aa11.53□□□□□ -0.56
VCP-207ENST00000493886 COL10A1Q03692 680 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms