RNA–Protein interactions for RNA: ENST00000493795.5

BRCA1-221, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 5,732 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-221ENST00000493795 GLIPR1P48060 266 aa6.79□□□□□ -1.32
BRCA1-221ENST00000493795 CEACAM21Q3KPI0 293 aa6.79□□□□□ -1.32
BRCA1-221ENST00000493795 RASL10BQ96S79 203 aa6.79□□□□□ -1.32
BRCA1-221ENST00000493795 SIGMAR1Q99720 223 aa6.79□□□□□ -1.32
BRCA1-221ENST00000493795 GGACTQ9BVM4 153 aa6.79□□□□□ -1.32
BRCA1-221ENST00000493795 LOXHD1Q8IVV2 1947 aa6.79□□□□□ -1.32
BRCA1-221ENST00000493795 TMEM229AB2RXF0 380 aa6.79□□□□□ -1.32
BRCA1-221ENST00000493795 EDIL3O43854 480 aa6.79□□□□□ -1.32
BRCA1-221ENST00000493795 NDUFA3O95167 84 aa6.79□□□□□ -1.32
BRCA1-221ENST00000493795 IGLV3-25P01717 112 aa6.79□□□□□ -1.32
BRCA1-221ENST00000493795 TMEM240Q5SV17 173 aa6.79□□□□□ -1.32
BRCA1-221ENST00000493795 CYB5R2Q6BCY4 276 aa6.79□□□□□ -1.32
BRCA1-221ENST00000493795 C16orf47Q6ZP98 133 aaPredicted RBP6.79□□□□□ -1.32
BRCA1-221ENST00000493795 CENPVQ7Z7K6 275 aaPredicted RBP6.79□□□□□ -1.32
BRCA1-221ENST00000493795 FER1L4A9Z1Z3 1794 aa6.79□□□□□ -1.32
BRCA1-221ENST00000493795 TRAV24A0A0B4J272 114 aa6.79□□□□□ -1.32
BRCA1-221ENST00000493795 A0A1B0GTL3 188 aa6.79□□□□□ -1.32
BRCA1-221ENST00000493795 A0A1B0GW15 77 aa6.79□□□□□ -1.32
BRCA1-221ENST00000493795 NPIPB4C9JG80 1138 aa6.79□□□□□ -1.32
BRCA1-221ENST00000493795 NPIPB11E5RHQ5 1161 aa6.79□□□□□ -1.32
BRCA1-221ENST00000493795 HOXA3O43365 443 aaPredicted RBP6.79□□□□□ -1.32
BRCA1-221ENST00000493795 LINC00614P0C842 121 aa6.79□□□□□ -1.32
BRCA1-221ENST00000493795 SAA1P0DJI8 122 aaPredicted RBP6.79□□□□□ -1.32
BRCA1-221ENST00000493795 CHODLQ9H9P2 273 aa6.79□□□□□ -1.32
BRCA1-221ENST00000493795 NDUFA2O43678 99 aa6.78□□□□□ -1.32
BRCA1-221ENST00000493795 IGKV3-20P01619 116 aa6.78□□□□□ -1.32
BRCA1-221ENST00000493795 CXCL2P19875 107 aa6.78□□□□□ -1.32
BRCA1-221ENST00000493795 FGF12P61328 243 aa6.78□□□□□ -1.32
BRCA1-221ENST00000493795 HSPE1P61604 102 aaKnown RBP6.78□□□□□ -1.32
BRCA1-221ENST00000493795 MARVELD3Q96A59 401 aa6.78□□□□□ -1.32
BRCA1-221ENST00000493795 ZNF488Q96MN9 340 aa6.78□□□□□ -1.32
BRCA1-221ENST00000493795 CALYQ9NYX4 217 aa6.78□□□□□ -1.32
BRCA1-221ENST00000493795 SEMA5BQ9P283 1151 aa6.78□□□□□ -1.32
BRCA1-221ENST00000493795 NAV1Q8NEY1 1877 aa6.78□□□□□ -1.32
BRCA1-221ENST00000493795 PGPEP1LA6NFU8 196 aa6.78□□□□□ -1.32
BRCA1-221ENST00000493795 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.78□□□□□ -1.32
BRCA1-221ENST00000493795 M0R381 172 aa6.78□□□□□ -1.32
BRCA1-221ENST00000493795 CRPP02741 224 aa6.78□□□□□ -1.32
BRCA1-221ENST00000493795 CT62P0C5K7 136 aa6.78□□□□□ -1.32
BRCA1-221ENST00000493795 MPV17P39210 176 aa6.78□□□□□ -1.32
BRCA1-221ENST00000493795 TDGF1P3P51864 188 aa6.78□□□□□ -1.32
BRCA1-221ENST00000493795 PRSS41Q7RTY9 318 aa6.78□□□□□ -1.32
BRCA1-221ENST00000493795 ST6GALNAC3Q8NDV1 305 aa6.78□□□□□ -1.32
BRCA1-221ENST00000493795 CLDND2Q8NHS1 167 aa6.78□□□□□ -1.32
BRCA1-221ENST00000493795 HIST1H2BAQ96A08 127 aa6.78□□□□□ -1.32
BRCA1-221ENST00000493795 MRPL20Q9BYC9 149 aaKnown RBP6.78□□□□□ -1.32
BRCA1-221ENST00000493795 H3BUT2 72 aa6.78□□□□□ -1.32
BRCA1-221ENST00000493795 BGLAPP02818 100 aa6.78□□□□□ -1.32
BRCA1-221ENST00000493795 ZFP36L2P47974 494 aaKnown RBP6.78□□□□□ -1.32
BRCA1-221ENST00000493795 RPL34P49207 117 aaKnown RBP6.78□□□□□ -1.32
BRCA1-221ENST00000493795 ISXQ2M1V0 245 aa6.78□□□□□ -1.32
BRCA1-221ENST00000493795 RSPO2Q6UXX9 243 aaPredicted RBP6.78□□□□□ -1.32
BRCA1-221ENST00000493795 SELENOHQ8IZQ5 122 aaKnown RBP6.78□□□□□ -1.32
BRCA1-221ENST00000493795 LINC00518Q8N0U6 118 aa6.78□□□□□ -1.32
BRCA1-221ENST00000493795 C14orf144Q96I85 54 aa6.78□□□□□ -1.32
BRCA1-221ENST00000493795 WNT10AQ9GZT5 417 aa6.78□□□□□ -1.32
BRCA1-221ENST00000493795 LOC101059915A0A1B0GWI6 518 aaPredicted RBP6.78□□□□□ -1.32
BRCA1-221ENST00000493795 SNAI2O43623 268 aa6.78□□□□□ -1.32
BRCA1-221ENST00000493795 OR2H2O95918 312 aa6.78□□□□□ -1.32
BRCA1-221ENST00000493795 FHITP49789 147 aa6.78□□□□□ -1.32
BRCA1-221ENST00000493795 CCL8P80075 99 aa6.78□□□□□ -1.32
BRCA1-221ENST00000493795 ATXN8Q156A1 80 aa6.78□□□□□ -1.32
BRCA1-221ENST00000493795 PMS2CLQ68D20 193 aa6.78□□□□□ -1.32
BRCA1-221ENST00000493795 PKIBQ9C010 78 aa6.78□□□□□ -1.32
BRCA1-221ENST00000493795 MEGF9Q9H1U4 602 aa6.78□□□□□ -1.32
BRCA1-221ENST00000493795 G6PC2Q9NQR9 355 aa6.78□□□□□ -1.32
BRCA1-221ENST00000493795 ELOVL5Q9NYP7 299 aa6.78□□□□□ -1.32
BRCA1-221ENST00000493795 COL14A1Q05707 1796 aaKnown RBP6.78□□□□□ -1.32
BRCA1-221ENST00000493795 PEX7O00628 323 aa6.77□□□□□ -1.32
BRCA1-221ENST00000493795 PGLYRP1O75594 196 aaPredicted RBP6.77□□□□□ -1.32
BRCA1-221ENST00000493795 VSIG10L2P0DP72 767 aa6.77□□□□□ -1.32
BRCA1-221ENST00000493795 CD69Q07108 199 aa6.77□□□□□ -1.32
BRCA1-221ENST00000493795 LY6EQ16553 131 aa6.77□□□□□ -1.32
BRCA1-221ENST00000493795 GAGE2EQ4V326 116 aa6.77□□□□□ -1.32
BRCA1-221ENST00000493795 CENPWQ5EE01 88 aa6.77□□□□□ -1.32
BRCA1-221ENST00000493795 DNM1P46Q6ZS02 220 aa6.77□□□□□ -1.32
BRCA1-221ENST00000493795 Q6ZS52 159 aa6.77□□□□□ -1.32
BRCA1-221ENST00000493795 RNF182Q8N6D2 247 aa6.77□□□□□ -1.32
BRCA1-221ENST00000493795 SSC4DQ8WTU2 575 aa6.77□□□□□ -1.32
BRCA1-221ENST00000493795 SSBP3Q9BWW4 388 aaPredicted RBP6.77□□□□□ -1.32
BRCA1-221ENST00000493795 MS4A6AQ9H2W1 248 aa6.77□□□□□ -1.32
BRCA1-221ENST00000493795 GAGE2DQ9UEU5 116 aa6.77□□□□□ -1.32
BRCA1-221ENST00000493795 SIGLEC5O15389 551 aa6.77□□□□□ -1.33
BRCA1-221ENST00000493795 PAX1P15863 534 aa6.77□□□□□ -1.33
BRCA1-221ENST00000493795 RND3P61587 244 aa6.77□□□□□ -1.33
BRCA1-221ENST00000493795 CD300CQ08708 224 aa6.77□□□□□ -1.33
BRCA1-221ENST00000493795 TMEM42Q69YG0 159 aa6.77□□□□□ -1.33
BRCA1-221ENST00000493795 TLNRD1Q9H1K6 362 aa6.77□□□□□ -1.33
BRCA1-221ENST00000493795 SDF2L1Q9HCN8 221 aa6.77□□□□□ -1.33
BRCA1-221ENST00000493795 LOC390937A0A1W2PQ73 354 aa6.77□□□□□ -1.33
BRCA1-221ENST00000493795 H3BTX0 84 aa6.77□□□□□ -1.33
BRCA1-221ENST00000493795 CD8AP01732 235 aa6.77□□□□□ -1.33
BRCA1-221ENST00000493795 HOXD4P09016 255 aaPredicted RBP6.77□□□□□ -1.33
BRCA1-221ENST00000493795 GCHFRP30047 84 aa6.77□□□□□ -1.33
BRCA1-221ENST00000493795 TMEM30BQ3MIR4 351 aa6.77□□□□□ -1.33
BRCA1-221ENST00000493795 TPRX1Q8N7U7 411 aa6.77□□□□□ -1.33
BRCA1-221ENST00000493795 GPR146Q96CH1 333 aa6.77□□□□□ -1.33
BRCA1-221ENST00000493795 FAM90A10PA6NDY2 464 aa6.77□□□□□ -1.33
BRCA1-221ENST00000493795 FAM90A18PA6NE21 464 aa6.77□□□□□ -1.33
BRCA1-221ENST00000493795 FAM90A16PA6NEW6 464 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms