RNA–Protein interactions for RNA: ENST00000493695.1

SMC4-223, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 457 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-223ENST00000493695 DICER1Q9UPY3 1922 aaKnown RBP1.12□□□□□ -2.23
SMC4-223ENST00000493695 WDR90Q96KV7 1748 aa1.12□□□□□ -2.23
SMC4-223ENST00000493695 DENND4BO75064 1496 aaPredicted RBP1.12□□□□□ -2.23
SMC4-223ENST00000493695 DISP1Q96F81 1524 aa1.11□□□□□ -2.23
SMC4-223ENST00000493695 CHD5Q8TDI0 1954 aa1.11□□□□□ -2.23
SMC4-223ENST00000493695 TRAV8-1A0A0A6YYK1 113 aa1.11□□□□□ -2.23
SMC4-223ENST00000493695 MDFIC2A0A1B0GVS7 189 aa1.11□□□□□ -2.23
SMC4-223ENST00000493695 ARRDC5A6NEK1 342 aa1.11□□□□□ -2.23
SMC4-223ENST00000493695 GOLGA6L10A6NI86 522 aa1.11□□□□□ -2.23
SMC4-223ENST00000493695 C2orf74A8MZ97 194 aa1.11□□□□□ -2.23
SMC4-223ENST00000493695 AZIN1O14977 448 aa1.11□□□□□ -2.23
SMC4-223ENST00000493695 GSTZ1O43708 216 aaPredicted RBP1.11□□□□□ -2.23
SMC4-223ENST00000493695 ADAP1O75689 374 aa1.11□□□□□ -2.23
SMC4-223ENST00000493695 ALOX5APP20292 161 aa1.11□□□□□ -2.23
SMC4-223ENST00000493695 RPL14P50914 215 aaKnown RBP1.11□□□□□ -2.23
SMC4-223ENST00000493695 ZNF90Q03938 601 aa1.11□□□□□ -2.23
SMC4-223ENST00000493695 EBPQ15125 230 aaKnown RBP1.11□□□□□ -2.23
SMC4-223ENST00000493695 C1orf174Q8IYL3 243 aa1.11□□□□□ -2.23
SMC4-223ENST00000493695 SLC35F6Q8N357 371 aa1.11□□□□□ -2.23
SMC4-223ENST00000493695 SLC37A2Q8TED4 501 aa1.11□□□□□ -2.23
SMC4-223ENST00000493695 Q8WTZ3 238 aa1.11□□□□□ -2.23
SMC4-223ENST00000493695 ASB13Q8WXK3 278 aa1.11□□□□□ -2.23
SMC4-223ENST00000493695 RNASE6Q93091 150 aaKnown RBP1.11□□□□□ -2.23
SMC4-223ENST00000493695 SLC35G5Q96KT7 338 aa1.11□□□□□ -2.23
SMC4-223ENST00000493695 TIMM21Q9BVV7 248 aa1.11□□□□□ -2.23
SMC4-223ENST00000493695 IMP3Q9NV31 184 aaKnown RBP1.11□□□□□ -2.23
SMC4-223ENST00000493695 EURLQ9NYK6 297 aa1.11□□□□□ -2.23
SMC4-223ENST00000493695 CR1P17927 2039 aa1.11□□□□□ -2.23
SMC4-223ENST00000493695 DOCK10Q96BY6 2186 aa1.11□□□□□ -2.23
SMC4-223ENST00000493695 ZNF532Q9HCE3 1301 aa1.11□□□□□ -2.23
SMC4-223ENST00000493695 ZFHX2Q9C0A1 2572 aaPredicted RBP1.1□□□□□ -2.23
SMC4-223ENST00000493695 TEX50A0A1B0GTY4 177 aa1.1□□□□□ -2.23
SMC4-223ENST00000493695 M0R381 172 aa1.1□□□□□ -2.23
SMC4-223ENST00000493695 STX10O60499 249 aa1.1□□□□□ -2.23
SMC4-223ENST00000493695 MT-CO2P00403 227 aa1.1□□□□□ -2.23
SMC4-223ENST00000493695 CXCL2P19875 107 aa1.1□□□□□ -2.23
SMC4-223ENST00000493695 RPS24P62847 133 aaKnown RBP1.1□□□□□ -2.23
SMC4-223ENST00000493695 HPCAP84074 193 aa1.1□□□□□ -2.23
SMC4-223ENST00000493695 SPATA12Q7Z6I5 190 aa1.1□□□□□ -2.23
SMC4-223ENST00000493695 MRPS24Q96EL2 167 aaKnown RBP1.1□□□□□ -2.23
SMC4-223ENST00000493695 CFAP53Q96M91 514 aa1.1□□□□□ -2.23
SMC4-223ENST00000493695 MIEN1Q9BRT3 115 aa1.1□□□□□ -2.23
SMC4-223ENST00000493695 MS4A6AQ9H2W1 248 aa1.1□□□□□ -2.23
SMC4-223ENST00000493695 SLC2A9Q9NRM0 540 aa1.1□□□□□ -2.23
SMC4-223ENST00000493695 SCN9AQ15858 1988 aa1.1□□□□□ -2.23
SMC4-223ENST00000493695 ABCC12Q96J65 1359 aa1.09□□□□□ -2.23
SMC4-223ENST00000493695 TRGV5A0A0B4J1U4 118 aa1.09□□□□□ -2.23
SMC4-223ENST00000493695 TINCRA0A1B0GVN0 87 aa1.09□□□□□ -2.23
SMC4-223ENST00000493695 A0A1W2PQD3 144 aa1.09□□□□□ -2.23
SMC4-223ENST00000493695 OR6C6A6NF89 314 aa1.09□□□□□ -2.23
SMC4-223ENST00000493695 FABP12A6NFH5 140 aa1.09□□□□□ -2.23
SMC4-223ENST00000493695 CALUO43852 315 aaPredicted RBP1.09□□□□□ -2.23
SMC4-223ENST00000493695 HPGDSO60760 199 aa1.09□□□□□ -2.23
SMC4-223ENST00000493695 NPYP01303 97 aa1.09□□□□□ -2.23
SMC4-223ENST00000493695 CXCL3P19876 107 aa1.09□□□□□ -2.23
SMC4-223ENST00000493695 BTN3A2P78410 334 aa1.09□□□□□ -2.23
SMC4-223ENST00000493695 DNAL1Q4LDG9 190 aa1.09□□□□□ -2.23
SMC4-223ENST00000493695 PABPC1L2AQ5JQF8 200 aa1.09□□□□□ -2.23
SMC4-223ENST00000493695 TMEM31Q5JXX7 168 aa1.09□□□□□ -2.23
SMC4-223ENST00000493695 LRRC34Q8IZ02 419 aa1.09□□□□□ -2.23
SMC4-223ENST00000493695 OR4X2Q8NGF9 303 aa1.09□□□□□ -2.23
SMC4-223ENST00000493695 LHFPL5Q8TAF8 219 aa1.09□□□□□ -2.23
SMC4-223ENST00000493695 RPS4Y2Q8TD47 263 aa1.09□□□□□ -2.23
SMC4-223ENST00000493695 DNAJB3Q8WWF6 145 aa1.09□□□□□ -2.23
SMC4-223ENST00000493695 CYGBQ8WWM9 190 aa1.09□□□□□ -2.23
SMC4-223ENST00000493695 SMIM19Q96E16 107 aa1.09□□□□□ -2.23
SMC4-223ENST00000493695 ZNF514Q96K75 400 aaPredicted RBP1.09□□□□□ -2.23
SMC4-223ENST00000493695 NSRP1Q9H0G5 558 aaKnown RBP1.09□□□□□ -2.23
SMC4-223ENST00000493695 HDGFL3Q9Y3E1 203 aa1.09□□□□□ -2.23
SMC4-223ENST00000493695 PCYT1BQ9Y5K3 369 aaPredicted RBP1.09□□□□□ -2.23
SMC4-223ENST00000493695 A0A087WUU8 490 aa1.08□□□□□ -2.24
SMC4-223ENST00000493695 ZNF705FA8MVS1 300 aaPredicted RBP1.08□□□□□ -2.24
SMC4-223ENST00000493695 ITGB1BP1O14713 200 aa1.08□□□□□ -2.24
SMC4-223ENST00000493695 BIRC5O15392 142 aa1.08□□□□□ -2.24
SMC4-223ENST00000493695 ATP8B1O43520 1251 aa1.08□□□□□ -2.24
SMC4-223ENST00000493695 ATP6V1G2O95670 118 aa1.08□□□□□ -2.24
SMC4-223ENST00000493695 UCHL1P09936 223 aa1.08□□□□□ -2.24
SMC4-223ENST00000493695 PET100P0DJ07 73 aa1.08□□□□□ -2.24
SMC4-223ENST00000493695 PEBP1P30086 187 aaKnown RBP1.08□□□□□ -2.24
SMC4-223ENST00000493695 CD151P48509 253 aa1.08□□□□□ -2.24
SMC4-223ENST00000493695 IDH3GP51553 393 aaPredicted RBP1.08□□□□□ -2.24
SMC4-223ENST00000493695 TAS2R30P59541 319 aa1.08□□□□□ -2.24
SMC4-223ENST00000493695 FKBP1AP62942 108 aaKnown RBP1.08□□□□□ -2.24
SMC4-223ENST00000493695 HOXC5Q00444 222 aa1.08□□□□□ -2.24
SMC4-223ENST00000493695 GNA13Q14344 377 aa1.08□□□□□ -2.24
SMC4-223ENST00000493695 FAM201AQ5SY85 155 aa1.08□□□□□ -2.24
SMC4-223ENST00000493695 LHFPL1Q86WI0 220 aa1.08□□□□□ -2.24
SMC4-223ENST00000493695 ZNF563Q8TA94 476 aa1.08□□□□□ -2.24
SMC4-223ENST00000493695 FGF13Q92913 245 aa1.08□□□□□ -2.24
SMC4-223ENST00000493695 PACRGQ96M98 296 aaPredicted RBP1.08□□□□□ -2.24
SMC4-223ENST00000493695 NDEL1Q9GZM8 345 aa1.08□□□□□ -2.24
SMC4-223ENST00000493695 TMEM222Q9H0R3 208 aa1.08□□□□□ -2.24
SMC4-223ENST00000493695 SPANXB1Q9NS25 103 aaPredicted RBP1.08□□□□□ -2.24
SMC4-223ENST00000493695 NAV1Q8NEY1 1877 aa1.07□□□□□ -2.24
SMC4-223ENST00000493695 RGS12O14924 1447 aa1.07□□□□□ -2.24
SMC4-223ENST00000493695 LINC00854A0A1B0GVQ3 168 aa1.07□□□□□ -2.24
SMC4-223ENST00000493695 BHLHE40O14503 412 aa1.07□□□□□ -2.24
SMC4-223ENST00000493695 KRT75O95678 551 aa1.07□□□□□ -2.24
SMC4-223ENST00000493695 OCMP0CE72 109 aaPredicted RBP1.07□□□□□ -2.24
SMC4-223ENST00000493695 TMEM33P57088 247 aa1.07□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms