RNA–Protein interactions for RNA: ENST00000493468.6

PRPF40A-211, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 1 (best)

Gene PRPF40A, Length 1,043 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-211ENST00000493468 TRBV9A0A0B4J1U6 114 aa10.62□□□□□ -0.71
PRPF40A-211ENST00000493468 SPRY2O43597 315 aa10.62□□□□□ -0.71
PRPF40A-211ENST00000493468 TUSC2O75896 110 aa10.62□□□□□ -0.71
PRPF40A-211ENST00000493468 NAPSAO96009 420 aa10.62□□□□□ -0.71
PRPF40A-211ENST00000493468 ALPLP05186 524 aa10.62□□□□□ -0.71
PRPF40A-211ENST00000493468 RHOGP84095 191 aa10.62□□□□□ -0.71
PRPF40A-211ENST00000493468 ANKRD55Q3KP44 614 aa10.62□□□□□ -0.71
PRPF40A-211ENST00000493468 Q499Y3 187 aa10.62□□□□□ -0.71
PRPF40A-211ENST00000493468 TMEM61Q8N0U2 210 aa10.62□□□□□ -0.71
PRPF40A-211ENST00000493468 CCDC197Q8NCU1 140 aa10.62□□□□□ -0.71
PRPF40A-211ENST00000493468 OR52B4Q8NGK2 314 aa10.62□□□□□ -0.71
PRPF40A-211ENST00000493468 OR52I1Q8NGK6 324 aa10.62□□□□□ -0.71
PRPF40A-211ENST00000493468 KCNG3Q8TAE7 436 aa10.62□□□□□ -0.71
PRPF40A-211ENST00000493468 PHLDA1Q8WV24 401 aaPredicted RBP10.62□□□□□ -0.71
PRPF40A-211ENST00000493468 THRSPQ92748 146 aa10.62□□□□□ -0.71
PRPF40A-211ENST00000493468 FAM46BQ96A09 425 aa10.62□□□□□ -0.71
PRPF40A-211ENST00000493468 Q96MT0 163 aa10.62□□□□□ -0.71
PRPF40A-211ENST00000493468 C11orf54Q9H0W9 315 aaPredicted RBP10.62□□□□□ -0.71
PRPF40A-211ENST00000493468 AKIP1Q9NQ31 210 aa10.62□□□□□ -0.71
PRPF40A-211ENST00000493468 ORC6Q9Y5N6 252 aa10.62□□□□□ -0.71
PRPF40A-211ENST00000493468 UBE2CO00762 179 aa10.61□□□□□ -0.71
PRPF40A-211ENST00000493468 OGG1O15527 345 aa10.61□□□□□ -0.71
PRPF40A-211ENST00000493468 MED14OSP0DP75 135 aa10.61□□□□□ -0.71
PRPF40A-211ENST00000493468 MAP2K4P45985 399 aa10.61□□□□□ -0.71
PRPF40A-211ENST00000493468 APOC4P55056 127 aa10.61□□□□□ -0.71
PRPF40A-211ENST00000493468 OR13C5Q8NGS8 318 aa10.61□□□□□ -0.71
PRPF40A-211ENST00000493468 SLC7A6OSQ96CW6 309 aaPredicted RBP10.61□□□□□ -0.71
PRPF40A-211ENST00000493468 NEDD4LQ96PU5 975 aa10.61□□□□□ -0.71
PRPF40A-211ENST00000493468 GHRLQ9UBU3 117 aa10.61□□□□□ -0.71
PRPF40A-211ENST00000493468 AASSQ9UDR5 926 aa10.61□□□□□ -0.71
PRPF40A-211ENST00000493468 TRBV5-7A0A0A0MS05 114 aa10.6□□□□□ -0.71
PRPF40A-211ENST00000493468 TRBV6-6A0A0A6YYG2 114 aa10.6□□□□□ -0.71
PRPF40A-211ENST00000493468 ATP8B1O43520 1251 aa10.6□□□□□ -0.71
PRPF40A-211ENST00000493468 EDN2P20800 178 aa10.6□□□□□ -0.71
PRPF40A-211ENST00000493468 CBLN1P23435 193 aa10.6□□□□□ -0.71
PRPF40A-211ENST00000493468 ZBTB25P24278 435 aa10.6□□□□□ -0.71
PRPF40A-211ENST00000493468 RPS11P62280 158 aaKnown RBP eCLIP10.6□□□□□ -0.71
PRPF40A-211ENST00000493468 ATP5G2Q06055 141 aa10.6□□□□□ -0.71
PRPF40A-211ENST00000493468 YIF1BQ5BJH7 314 aa10.6□□□□□ -0.71
PRPF40A-211ENST00000493468 ZNF57Q68EA5 555 aaPredicted RBP10.6□□□□□ -0.71
PRPF40A-211ENST00000493468 NKAIN3Q8N8D7 197 aa10.6□□□□□ -0.71
PRPF40A-211ENST00000493468 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.6□□□□□ -0.71
PRPF40A-211ENST00000493468 PHB2Q99623 299 aa10.6□□□□□ -0.71
PRPF40A-211ENST00000493468 UQCC2Q9BRT2 126 aa10.6□□□□□ -0.71
PRPF40A-211ENST00000493468 AMBNQ9NP70 447 aa10.6□□□□□ -0.71
PRPF40A-211ENST00000493468 SLC35D1Q9NTN3 355 aa10.6□□□□□ -0.71
PRPF40A-211ENST00000493468 ZNF221Q9UK13 617 aa10.6□□□□□ -0.71
PRPF40A-211ENST00000493468 RPL36Q9Y3U8 105 aaKnown RBP10.6□□□□□ -0.71
PRPF40A-211ENST00000493468 DMRT1Q9Y5R6 373 aa10.6□□□□□ -0.71
PRPF40A-211ENST00000493468 DNAH2Q9P225 4427 aa10.59□□□□□ -0.71
PRPF40A-211ENST00000493468 SAC3D1A6NKF1 404 aa10.59□□□□□ -0.71
PRPF40A-211ENST00000493468 A8MWP6 167 aa10.59□□□□□ -0.71
PRPF40A-211ENST00000493468 GGCTO75223 188 aaKnown RBP10.59□□□□□ -0.71
PRPF40A-211ENST00000493468 CEACAM6P40199 344 aa10.59□□□□□ -0.71
PRPF40A-211ENST00000493468 LINC00205P59089 165 aa10.59□□□□□ -0.71
PRPF40A-211ENST00000493468 PRR20EP86478 221 aa10.59□□□□□ -0.71
PRPF40A-211ENST00000493468 PRR20CP86479 221 aa10.59□□□□□ -0.71
PRPF40A-211ENST00000493468 PRR20DP86480 221 aa10.59□□□□□ -0.71
PRPF40A-211ENST00000493468 PRR20BP86481 221 aa10.59□□□□□ -0.71
PRPF40A-211ENST00000493468 PRR20AP86496 221 aa10.59□□□□□ -0.71
PRPF40A-211ENST00000493468 ZNF45Q02386 682 aa10.59□□□□□ -0.71
PRPF40A-211ENST00000493468 MRGPRG-AS1Q2M3A8 158 aa10.59□□□□□ -0.71
PRPF40A-211ENST00000493468 DEFB135Q30KP9 77 aa10.59□□□□□ -0.71
PRPF40A-211ENST00000493468 GLT8D1Q68CQ7 371 aa10.59□□□□□ -0.71
PRPF40A-211ENST00000493468 TMPRSS11AQ6ZMR5 421 aa10.59□□□□□ -0.71
PRPF40A-211ENST00000493468 LINC00336Q6ZUF6 198 aa10.59□□□□□ -0.71
PRPF40A-211ENST00000493468 GPHB5Q86YW7 130 aa10.59□□□□□ -0.71
PRPF40A-211ENST00000493468 NECAP1Q8NC96 275 aa10.59□□□□□ -0.71
PRPF40A-211ENST00000493468 RHOXF1Q8NHV9 184 aa10.59□□□□□ -0.71
PRPF40A-211ENST00000493468 RNF183Q96D59 192 aa10.59□□□□□ -0.71
PRPF40A-211ENST00000493468 HARBI1Q96MB7 349 aa10.59□□□□□ -0.71
PRPF40A-211ENST00000493468 FAAP24Q9BTP7 215 aa10.59□□□□□ -0.71
PRPF40A-211ENST00000493468 RIMS4Q9H426 269 aaPredicted RBP10.59□□□□□ -0.71
PRPF40A-211ENST00000493468 FGF20Q9NP95 211 aaPredicted RBP10.59□□□□□ -0.71
PRPF40A-211ENST00000493468 OR1A1Q9P1Q5 309 aa10.59□□□□□ -0.71
PRPF40A-211ENST00000493468 MGAT4AQ9UM21 535 aa10.59□□□□□ -0.71
PRPF40A-211ENST00000493468 DYNC1H1Q14204 4646 aaKnown RBP10.59□□□□□ -0.71
PRPF40A-211ENST00000493468 KIR2DL5BA0A0G2JN68 375 aa10.58□□□□□ -0.72
PRPF40A-211ENST00000493468 KIR2DL5BA0A0G2JPC4 375 aa10.58□□□□□ -0.72
PRPF40A-211ENST00000493468 UBBP0CG47 229 aa10.58□□□□□ -0.72
PRPF40A-211ENST00000493468 TCTAP57738 103 aa10.58□□□□□ -0.72
PRPF40A-211ENST00000493468 HLA-DRB3P79483 266 aa10.58□□□□□ -0.72
PRPF40A-211ENST00000493468 TAGLNQ01995 201 aaKnown RBP10.58□□□□□ -0.72
PRPF40A-211ENST00000493468 TMEM177Q53S58 311 aa10.58□□□□□ -0.72
PRPF40A-211ENST00000493468 C6orf201Q7Z4U5 140 aa10.58□□□□□ -0.72
PRPF40A-211ENST00000493468 KIR2DL5AQ8N109 375 aa10.58□□□□□ -0.72
PRPF40A-211ENST00000493468 KIR2DL5BQ8NHK3 375 aa10.58□□□□□ -0.72
PRPF40A-211ENST00000493468 SRSF12Q8WXF0 261 aaKnown RBP10.58□□□□□ -0.72
PRPF40A-211ENST00000493468 CHMP1AQ9HD42 196 aaPredicted RBP10.58□□□□□ -0.72
PRPF40A-211ENST00000493468 MLXQ9UH92 298 aa10.58□□□□□ -0.72
PRPF40A-211ENST00000493468 DNAH17Q9UFH2 4485 aa10.58□□□□□ -0.72
PRPF40A-211ENST00000493468 DNAH11Q96DT5 4516 aa10.57□□□□□ -0.72
PRPF40A-211ENST00000493468 TRAV25A0A0B4J276 109 aa10.57□□□□□ -0.72
PRPF40A-211ENST00000493468 TMEM213A2RRL7 107 aa10.57□□□□□ -0.72
PRPF40A-211ENST00000493468 PPP5D1E7EU14 171 aa10.57□□□□□ -0.72
PRPF40A-211ENST00000493468 M0R1X1 148 aa10.57□□□□□ -0.72
PRPF40A-211ENST00000493468 EI24O14681 340 aa10.57□□□□□ -0.72
PRPF40A-211ENST00000493468 APELAP0DMC3 54 aa10.57□□□□□ -0.72
PRPF40A-211ENST00000493468 CBX3Q13185 183 aa10.57□□□□□ -0.72
PRPF40A-211ENST00000493468 TM4SF20Q53R12 229 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 147.2 ms