RNA–Protein interactions for RNA: ENST00000493177.1

MSH6-208, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 813 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-208ENST00000493177 TGIF2LXQ8IUE1 241 aa10.84□□□□□ -0.67
MSH6-208ENST00000493177 PIP4P2Q8N4L2 257 aa10.84□□□□□ -0.67
MSH6-208ENST00000493177 CCDC71LQ8N9Z2 235 aa10.84□□□□□ -0.67
MSH6-208ENST00000493177 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.84□□□□□ -0.67
MSH6-208ENST00000493177 ZBTB34Q8NCN2 500 aa10.84□□□□□ -0.67
MSH6-208ENST00000493177 C5orf30Q96GV9 206 aa10.84□□□□□ -0.67
MSH6-208ENST00000493177 C20orf85Q9H1P6 137 aa10.84□□□□□ -0.67
MSH6-208ENST00000493177 GPR132Q9UNW8 380 aa10.84□□□□□ -0.67
MSH6-208ENST00000493177 FLVCR2Q9UPI3 526 aa10.84□□□□□ -0.67
MSH6-208ENST00000493177 GAB2Q9UQC2 676 aa10.84□□□□□ -0.67
MSH6-208ENST00000493177 NUBP2Q9Y5Y2 271 aa10.84□□□□□ -0.67
MSH6-208ENST00000493177 DNHD1Q96M86 4753 aa10.84□□□□□ -0.67
MSH6-208ENST00000493177 A0A0U1RQK1 487 aa10.83□□□□□ -0.68
MSH6-208ENST00000493177 GAPDHP04406 335 aaKnown RBP10.83□□□□□ -0.68
MSH6-208ENST00000493177 FBP1P09467 338 aa10.83□□□□□ -0.68
MSH6-208ENST00000493177 H2AFB2P0C5Z0 115 aa10.83□□□□□ -0.68
MSH6-208ENST00000493177 SPNP16150 400 aa10.83□□□□□ -0.68
MSH6-208ENST00000493177 PIGPP57054 158 aa10.83□□□□□ -0.68
MSH6-208ENST00000493177 FAM71F2Q6NXP2 309 aa10.83□□□□□ -0.68
MSH6-208ENST00000493177 PLET1Q6UQ28 207 aa10.83□□□□□ -0.68
MSH6-208ENST00000493177 Q6YL49 198 aa10.83□□□□□ -0.68
MSH6-208ENST00000493177 MOB3BQ86TA1 216 aa10.83□□□□□ -0.68
MSH6-208ENST00000493177 DRAXINQ8NBI3 349 aaPredicted RBP10.83□□□□□ -0.68
MSH6-208ENST00000493177 BVESQ8NE79 360 aa10.83□□□□□ -0.68
MSH6-208ENST00000493177 C17orf50Q8WW18 174 aa10.83□□□□□ -0.68
MSH6-208ENST00000493177 SSMEM1Q8WWF3 244 aa10.83□□□□□ -0.68
MSH6-208ENST00000493177 ZNF486Q96H40 463 aaPredicted RBP10.83□□□□□ -0.68
MSH6-208ENST00000493177 GPHA2Q96T91 129 aa10.83□□□□□ -0.68
MSH6-208ENST00000493177 MRPL20Q9BYC9 149 aaKnown RBP10.83□□□□□ -0.68
MSH6-208ENST00000493177 C5orf66Q9H5L9 145 aa10.83□□□□□ -0.68
MSH6-208ENST00000493177 TEX13DA0A0J9YY54 714 aaPredicted RBP10.82□□□□□ -0.68
MSH6-208ENST00000493177 LY6LH3BQJ8 138 aa10.82□□□□□ -0.68
MSH6-208ENST00000493177 TXNL1O43396 289 aa10.82□□□□□ -0.68
MSH6-208ENST00000493177 IGLV2-14P01704 120 aa10.82□□□□□ -0.68
MSH6-208ENST00000493177 AKR1C4P17516 323 aa10.82□□□□□ -0.68
MSH6-208ENST00000493177 PAX6P26367 422 aa10.82□□□□□ -0.68
MSH6-208ENST00000493177 THBS3P49746 956 aa10.82□□□□□ -0.68
MSH6-208ENST00000493177 ARHGDIBP52566 201 aa10.82□□□□□ -0.68
MSH6-208ENST00000493177 ZNF137PP52743 207 aa10.82□□□□□ -0.68
MSH6-208ENST00000493177 RAB25P57735 213 aa10.82□□□□□ -0.68
MSH6-208ENST00000493177 ZNF816Q0VGE8 651 aaPredicted RBP10.82□□□□□ -0.68
MSH6-208ENST00000493177 CATR1Q13166 79 aa10.82□□□□□ -0.68
MSH6-208ENST00000493177 MSMO1Q15800 293 aa10.82□□□□□ -0.68
MSH6-208ENST00000493177 TRIM16LQ309B1 348 aa10.82□□□□□ -0.68
MSH6-208ENST00000493177 LDLRAD2Q5SZI1 272 aa10.82□□□□□ -0.68
MSH6-208ENST00000493177 CCDC144NLQ6NUI1 221 aa10.82□□□□□ -0.68
MSH6-208ENST00000493177 GLDNQ6ZMI3 551 aaPredicted RBP10.82□□□□□ -0.68
MSH6-208ENST00000493177 TBC1D26Q86UD7 250 aa10.82□□□□□ -0.68
MSH6-208ENST00000493177 CENPSQ8N2Z9 138 aa10.82□□□□□ -0.68
MSH6-208ENST00000493177 ADAD2Q8NCV1 583 aaKnown RBP10.82□□□□□ -0.68
MSH6-208ENST00000493177 OR51H1Q8NH63 302 aa10.82□□□□□ -0.68
MSH6-208ENST00000493177 TCTEX1D2Q8WW35 142 aa10.82□□□□□ -0.68
MSH6-208ENST00000493177 RTN4IP1Q8WWV3 396 aaPredicted RBP10.82□□□□□ -0.68
MSH6-208ENST00000493177 ST6GALNAC6Q969X2 333 aa10.82□□□□□ -0.68
MSH6-208ENST00000493177 MALSU1Q96EH3 234 aa10.82□□□□□ -0.68
MSH6-208ENST00000493177 HSD17B10Q99714 261 aaKnown RBP10.82□□□□□ -0.68
MSH6-208ENST00000493177 ZNF251Q9BRH9 671 aa10.82□□□□□ -0.68
MSH6-208ENST00000493177 RTBDNQ9BSG5 229 aaPredicted RBP10.82□□□□□ -0.68
MSH6-208ENST00000493177 BEX1Q9HBH7 125 aa10.82□□□□□ -0.68
MSH6-208ENST00000493177 SLC2A9Q9NRM0 540 aa10.82□□□□□ -0.68
MSH6-208ENST00000493177 NUDT15Q9NV35 164 aa10.82□□□□□ -0.68
MSH6-208ENST00000493177 POMT1Q9Y6A1 747 aa10.82□□□□□ -0.68
MSH6-208ENST00000493177 IGHV1-3A0A0C4DH29 117 aa10.81□□□□□ -0.68
MSH6-208ENST00000493177 FAM181BA6NEQ2 426 aa10.81□□□□□ -0.68
MSH6-208ENST00000493177 OOSP1A8MZH6 123 aa10.81□□□□□ -0.68
MSH6-208ENST00000493177 PGLYRP1O75594 196 aaPredicted RBP10.81□□□□□ -0.68
MSH6-208ENST00000493177 ANXA7P20073 488 aaKnown RBP10.81□□□□□ -0.68
MSH6-208ENST00000493177 DUTP33316 252 aaKnown RBP10.81□□□□□ -0.68
MSH6-208ENST00000493177 LINC00205P59089 165 aa10.81□□□□□ -0.68
MSH6-208ENST00000493177 TAS2R31P59538 309 aa10.81□□□□□ -0.68
MSH6-208ENST00000493177 TUSC1Q2TAM9 212 aa10.81□□□□□ -0.68
MSH6-208ENST00000493177 OR2B11Q5JQS5 317 aa10.81□□□□□ -0.68
MSH6-208ENST00000493177 C11orf88Q6PI97 169 aa10.81□□□□□ -0.68
MSH6-208ENST00000493177 CCBE1Q6UXH8 406 aaPredicted RBP10.81□□□□□ -0.68
MSH6-208ENST00000493177 ZNF66Q6ZN08 573 aa10.81□□□□□ -0.68
MSH6-208ENST00000493177 KCTD9Q7L273 389 aa10.81□□□□□ -0.68
MSH6-208ENST00000493177 SGPP2Q8IWX5 399 aa10.81□□□□□ -0.68
MSH6-208ENST00000493177 TMEM86BQ8N661 226 aa10.81□□□□□ -0.68
MSH6-208ENST00000493177 DUSP18Q8NEJ0 188 aa10.81□□□□□ -0.68
MSH6-208ENST00000493177 ADTRPQ96IZ2 230 aa10.81□□□□□ -0.68
MSH6-208ENST00000493177 NABP2Q9BQ15 211 aa10.81□□□□□ -0.68
MSH6-208ENST00000493177 IGHV3-72A0A0B4J1Y9 119 aa10.8□□□□□ -0.68
MSH6-208ENST00000493177 INMT-MINDY4F8WBC2 141 aa10.8□□□□□ -0.68
MSH6-208ENST00000493177 MPPED1O15442 326 aa10.8□□□□□ -0.68
MSH6-208ENST00000493177 PROP1O75360 226 aa10.8□□□□□ -0.68
MSH6-208ENST00000493177 APOA2P02652 100 aa10.8□□□□□ -0.68
MSH6-208ENST00000493177 CT45A6P0DMU7 189 aa10.8□□□□□ -0.68
MSH6-208ENST00000493177 CT45A5P0DMU8 189 aa10.8□□□□□ -0.68
MSH6-208ENST00000493177 CT45A7P0DMV0 189 aa10.8□□□□□ -0.68
MSH6-208ENST00000493177 RND3P61587 244 aa10.8□□□□□ -0.68
MSH6-208ENST00000493177 RPL30P62888 115 aaKnown RBP10.8□□□□□ -0.68
MSH6-208ENST00000493177 OR8H3Q8N146 312 aa10.8□□□□□ -0.68
MSH6-208ENST00000493177 DYNAPQ8N1N2 210 aa10.8□□□□□ -0.68
MSH6-208ENST00000493177 TAF15Q92804 592 aaKnown RBP eCLIP10.8□□□□□ -0.68
MSH6-208ENST00000493177 CHIAQ9BZP6 476 aa10.8□□□□□ -0.68
MSH6-208ENST00000493177 PRDM13Q9H4Q3 707 aa10.8□□□□□ -0.68
MSH6-208ENST00000493177 NAA60Q9H7X0 242 aa10.8□□□□□ -0.68
MSH6-208ENST00000493177 PRELID3BQ9Y3B1 194 aa10.8□□□□□ -0.68
MSH6-208ENST00000493177 A0A1W2PPI3 338 aa10.79□□□□□ -0.68
MSH6-208ENST00000493177 LINC00473A8K010 186 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms