RNA–Protein interactions for RNA: ENST00000492455.1

HMGB1P30-201, Transcript of high mobility group box 1 pseudogene 30, humanhuman

BASIC

Gene HMGB1P30, Length 606 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P30-201ENST00000492455 IGHV3-15A0A0B4J1V0 119 aa1.14□□□□□ -2.23
HMGB1P30-201ENST00000492455 GRIFINA4D1Z8 144 aa1.14□□□□□ -2.23
HMGB1P30-201ENST00000492455 VPS37CA5D8V6 355 aaPredicted RBP1.14□□□□□ -2.23
HMGB1P30-201ENST00000492455 KNCNA6PVL3 124 aa1.14□□□□□ -2.23
HMGB1P30-201ENST00000492455 H0Y980 276 aa1.14□□□□□ -2.23
HMGB1P30-201ENST00000492455 H3BPC8 53 aa1.14□□□□□ -2.23
HMGB1P30-201ENST00000492455 CXCR6O00574 342 aa1.14□□□□□ -2.23
HMGB1P30-201ENST00000492455 SLC16A4O15374 487 aa1.14□□□□□ -2.23
HMGB1P30-201ENST00000492455 GZMBP10144 247 aa1.14□□□□□ -2.23
HMGB1P30-201ENST00000492455 CD36P16671 472 aa1.14□□□□□ -2.23
HMGB1P30-201ENST00000492455 CTBP2P56545 445 aa1.14□□□□□ -2.23
HMGB1P30-201ENST00000492455 PPP1R1AQ13522 171 aa1.14□□□□□ -2.23
HMGB1P30-201ENST00000492455 SS18Q15532 418 aa1.14□□□□□ -2.23
HMGB1P30-201ENST00000492455 N4BP2L1Q5TBK1 243 aaPredicted RBP1.14□□□□□ -2.23
HMGB1P30-201ENST00000492455 TNFAIP8L2Q6P589 184 aaPredicted RBP1.14□□□□□ -2.23
HMGB1P30-201ENST00000492455 AMTNQ6UX39 209 aa1.14□□□□□ -2.23
HMGB1P30-201ENST00000492455 CCDC121Q6ZUS5 278 aa1.14□□□□□ -2.23
HMGB1P30-201ENST00000492455 LRRC34Q8IZ02 419 aa1.14□□□□□ -2.23
HMGB1P30-201ENST00000492455 PHOSPHO2Q8TCD6 241 aa1.14□□□□□ -2.23
HMGB1P30-201ENST00000492455 EEF1AKMT1Q8WVE0 214 aa1.14□□□□□ -2.23
HMGB1P30-201ENST00000492455 OR52B2Q96RD2 323 aa1.14□□□□□ -2.23
HMGB1P30-201ENST00000492455 TMEM109Q9BVC6 243 aa1.14□□□□□ -2.23
HMGB1P30-201ENST00000492455 ZNF471Q9BX82 626 aaPredicted RBP1.14□□□□□ -2.23
HMGB1P30-201ENST00000492455 DKKL1Q9UK85 242 aa1.14□□□□□ -2.23
HMGB1P30-201ENST00000492455 CHD2O14647 1828 aaKnown RBP1.13□□□□□ -2.23
HMGB1P30-201ENST00000492455 ITGB4P16144 1822 aa1.13□□□□□ -2.23
HMGB1P30-201ENST00000492455 ATAD5Q96QE3 1844 aa1.13□□□□□ -2.23
HMGB1P30-201ENST00000492455 ABCC11Q96J66 1382 aa1.13□□□□□ -2.23
HMGB1P30-201ENST00000492455 TRGV4A0A0C4DH28 118 aa1.13□□□□□ -2.23
HMGB1P30-201ENST00000492455 MUC21A0A0G2JKD1 596 aa1.13□□□□□ -2.23
HMGB1P30-201ENST00000492455 MUC21A0A140T8X8 626 aa1.13□□□□□ -2.23
HMGB1P30-201ENST00000492455 OR6C6A6NF89 314 aa1.13□□□□□ -2.23
HMGB1P30-201ENST00000492455 OR5K4A6NMS3 321 aa1.13□□□□□ -2.23
HMGB1P30-201ENST00000492455 OR11H12B2RN74 326 aa1.13□□□□□ -2.23
HMGB1P30-201ENST00000492455 M0QZ92 97 aa1.13□□□□□ -2.23
HMGB1P30-201ENST00000492455 UBFD1O14562 309 aaKnown RBP1.13□□□□□ -2.23
HMGB1P30-201ENST00000492455 IGHV1-69P01742 117 aa1.13□□□□□ -2.23
HMGB1P30-201ENST00000492455 APOEP02649 317 aa1.13□□□□□ -2.23
HMGB1P30-201ENST00000492455 REG1AP05451 166 aa1.13□□□□□ -2.23
HMGB1P30-201ENST00000492455 CSRP1P21291 193 aaKnown RBP1.13□□□□□ -2.23
HMGB1P30-201ENST00000492455 DDTP30046 118 aa1.13□□□□□ -2.23
HMGB1P30-201ENST00000492455 RPL12P30050 165 aaKnown RBP1.13□□□□□ -2.23
HMGB1P30-201ENST00000492455 PSMD8P48556 350 aa1.13□□□□□ -2.23
HMGB1P30-201ENST00000492455 HOXC5Q00444 222 aa1.13□□□□□ -2.23
HMGB1P30-201ENST00000492455 TMEM31Q5JXX7 168 aa1.13□□□□□ -2.23
HMGB1P30-201ENST00000492455 CHCHD2P9Q5T1J5 151 aaPredicted RBP1.13□□□□□ -2.23
HMGB1P30-201ENST00000492455 LGALS9CQ6DKI2 356 aa1.13□□□□□ -2.23
HMGB1P30-201ENST00000492455 LRRN1Q6UXK5 716 aa1.13□□□□□ -2.23
HMGB1P30-201ENST00000492455 C2orf91Q6ZV80 131 aa1.13□□□□□ -2.23
HMGB1P30-201ENST00000492455 BAP18Q8IXM2 172 aa1.13□□□□□ -2.23
HMGB1P30-201ENST00000492455 DAND5Q8N907 189 aa1.13□□□□□ -2.23
HMGB1P30-201ENST00000492455 TMEM161BQ8NDZ6 487 aa1.13□□□□□ -2.23
HMGB1P30-201ENST00000492455 OR11H2Q8NH07 326 aa1.13□□□□□ -2.23
HMGB1P30-201ENST00000492455 PIGXQ8TBF5 258 aa1.13□□□□□ -2.23
HMGB1P30-201ENST00000492455 RNASE6Q93091 150 aaKnown RBP1.13□□□□□ -2.23
HMGB1P30-201ENST00000492455 ARL5BQ96KC2 179 aa1.13□□□□□ -2.23
HMGB1P30-201ENST00000492455 FGFR1OP2Q9NVK5 253 aa1.13□□□□□ -2.23
HMGB1P30-201ENST00000492455 POLR1DQ9Y2S0 133 aa1.13□□□□□ -2.23
HMGB1P30-201ENST00000492455 KLK5Q9Y337 293 aaPredicted RBP1.13□□□□□ -2.23
HMGB1P30-201ENST00000492455 MMACHCQ9Y4U1 282 aa1.13□□□□□ -2.23
HMGB1P30-201ENST00000492455 OTOGLQ3ZCN5 2332 aa1.13□□□□□ -2.23
HMGB1P30-201ENST00000492455 DSCAMO60469 2012 aa1.12□□□□□ -2.23
HMGB1P30-201ENST00000492455 ADGRB3O60242 1522 aa1.12□□□□□ -2.23
HMGB1P30-201ENST00000492455 MDFIC2A0A1B0GVS7 189 aa1.12□□□□□ -2.23
HMGB1P30-201ENST00000492455 C21orf140B9A014 251 aa1.12□□□□□ -2.23
HMGB1P30-201ENST00000492455 LRRN3E7EW58 273 aa1.12□□□□□ -2.23
HMGB1P30-201ENST00000492455 TRAPPC3O43617 180 aa1.12□□□□□ -2.23
HMGB1P30-201ENST00000492455 NIPSNAP2O75323 286 aa1.12□□□□□ -2.23
HMGB1P30-201ENST00000492455 NDUFB2O95178 105 aa1.12□□□□□ -2.23
HMGB1P30-201ENST00000492455 HLA-DQB2P05538 268 aa1.12□□□□□ -2.23
HMGB1P30-201ENST00000492455 CDK9P50750 372 aaKnown RBP1.12□□□□□ -2.23
HMGB1P30-201ENST00000492455 KRTAP12-1P59990 96 aa1.12□□□□□ -2.23
HMGB1P30-201ENST00000492455 BTN3A2P78410 334 aa1.12□□□□□ -2.23
HMGB1P30-201ENST00000492455 HES1Q14469 280 aa1.12□□□□□ -2.23
HMGB1P30-201ENST00000492455 PLPPR5Q32ZL2 321 aa1.12□□□□□ -2.23
HMGB1P30-201ENST00000492455 LGALS9BQ3B8N2 356 aa1.12□□□□□ -2.23
HMGB1P30-201ENST00000492455 SBSNQ6UWP8 590 aa1.12□□□□□ -2.23
HMGB1P30-201ENST00000492455 SPATA12Q7Z6I5 190 aa1.12□□□□□ -2.23
HMGB1P30-201ENST00000492455 COMMD7Q86VX2 200 aa1.12□□□□□ -2.23
HMGB1P30-201ENST00000492455 GPHB5Q86YW7 130 aa1.12□□□□□ -2.23
HMGB1P30-201ENST00000492455 PACRGLQ8N7B6 248 aa1.12□□□□□ -2.23
HMGB1P30-201ENST00000492455 CNEP1R1Q8N9A8 125 aa1.12□□□□□ -2.23
HMGB1P30-201ENST00000492455 CLDND2Q8NHS1 167 aa1.12□□□□□ -2.23
HMGB1P30-201ENST00000492455 JOSD2Q8TAC2 188 aa1.12□□□□□ -2.23
HMGB1P30-201ENST00000492455 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP1.12□□□□□ -2.23
HMGB1P30-201ENST00000492455 RAB8BQ92930 207 aa1.12□□□□□ -2.23
HMGB1P30-201ENST00000492455 SFRP2Q96HF1 295 aa1.12□□□□□ -2.23
HMGB1P30-201ENST00000492455 ANKRD36BP1Q96IX9 119 aa1.12□□□□□ -2.23
HMGB1P30-201ENST00000492455 DNAJC30Q96LL9 226 aa1.12□□□□□ -2.23
HMGB1P30-201ENST00000492455 PECRQ9BY49 303 aa1.12□□□□□ -2.23
HMGB1P30-201ENST00000492455 BABAM2Q9NXR7 383 aa1.12□□□□□ -2.23
HMGB1P30-201ENST00000492455 FAM215AQ9Y5M1 114 aa1.12□□□□□ -2.23
HMGB1P30-201ENST00000492455 KIF15Q9NS87 1388 aa1.11□□□□□ -2.23
HMGB1P30-201ENST00000492455 ADAMTS7Q9UKP4 1686 aa1.11□□□□□ -2.23
HMGB1P30-201ENST00000492455 COL11A1P12107 1806 aaPredicted RBP1.11□□□□□ -2.23
HMGB1P30-201ENST00000492455 A0A1W2PQD3 144 aa1.11□□□□□ -2.23
HMGB1P30-201ENST00000492455 A0A1W2PQL4 384 aaPredicted RBP1.11□□□□□ -2.23
HMGB1P30-201ENST00000492455 TMEM235A6NFC5 223 aa1.11□□□□□ -2.23
HMGB1P30-201ENST00000492455 C11orf86A6NJI1 115 aa1.11□□□□□ -2.23
HMGB1P30-201ENST00000492455 C9JCJ5 164 aa1.11□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms