RNA–Protein interactions for RNA: ENST00000491659.5

USP39-217, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 648 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-217ENST00000491659 G3V318 75 aa11.8□□□□□ -0.52
USP39-217ENST00000491659 CCL24O00175 119 aa11.8□□□□□ -0.52
USP39-217ENST00000491659 PROP1O75360 226 aa11.8□□□□□ -0.52
USP39-217ENST00000491659 RAB25P57735 213 aa11.8□□□□□ -0.52
USP39-217ENST00000491659 NDPQ00604 133 aa11.8□□□□□ -0.52
USP39-217ENST00000491659 DEFB136Q30KP8 78 aa11.8□□□□□ -0.52
USP39-217ENST00000491659 NUDCD2Q8WVJ2 157 aa11.8□□□□□ -0.52
USP39-217ENST00000491659 C4orf3Q8WVX3 66 aa11.8□□□□□ -0.52
USP39-217ENST00000491659 FLYWCH2Q96CP2 140 aaKnown RBP11.8□□□□□ -0.52
USP39-217ENST00000491659 RAX2Q96IS3 184 aa11.8□□□□□ -0.52
USP39-217ENST00000491659 DUX3Q96PT4 197 aa11.8□□□□□ -0.52
USP39-217ENST00000491659 DCSTAMPQ9H295 470 aa11.8□□□□□ -0.52
USP39-217ENST00000491659 ELF5Q9UKW6 265 aaPredicted RBP11.8□□□□□ -0.52
USP39-217ENST00000491659 GAB2Q9UQC2 676 aa11.8□□□□□ -0.52
USP39-217ENST00000491659 IGKV1D-8A0A087WSZ0 117 aa11.79□□□□□ -0.52
USP39-217ENST00000491659 IGKV1-16P04430 117 aa11.79□□□□□ -0.52
USP39-217ENST00000491659 CTXN2P0C2S0 81 aa11.79□□□□□ -0.52
USP39-217ENST00000491659 PPIFP30405 207 aaKnown RBP11.79□□□□□ -0.52
USP39-217ENST00000491659 LINC00205P59089 165 aa11.79□□□□□ -0.52
USP39-217ENST00000491659 CX3CL1P78423 397 aa11.79□□□□□ -0.52
USP39-217ENST00000491659 TAGLNQ01995 201 aaKnown RBP11.79□□□□□ -0.52
USP39-217ENST00000491659 PSG5Q15238 335 aa11.79□□□□□ -0.52
USP39-217ENST00000491659 ZNF260Q3ZCT1 412 aa11.79□□□□□ -0.52
USP39-217ENST00000491659 H1FOOQ8IZA3 346 aaPredicted RBP11.79□□□□□ -0.52
USP39-217ENST00000491659 TCTEX1D1Q8N7M0 179 aa11.79□□□□□ -0.52
USP39-217ENST00000491659 TSPAN14Q8NG11 270 aa11.79□□□□□ -0.52
USP39-217ENST00000491659 CLCC1Q96S66 551 aa11.79□□□□□ -0.52
USP39-217ENST00000491659 ST6GALNAC5Q9BVH7 336 aa11.79□□□□□ -0.52
USP39-217ENST00000491659 MRPS26Q9BYN8 205 aaKnown RBP11.79□□□□□ -0.52
USP39-217ENST00000491659 NDUFA13Q9P0J0 144 aa11.79□□□□□ -0.52
USP39-217ENST00000491659 A3GALT2U3KPV4 340 aa11.79□□□□□ -0.52
USP39-217ENST00000491659 PRKDCP78527 4128 aaKnown RBP11.78□□□□□ -0.52
USP39-217ENST00000491659 A0A1W2PN81 502 aa11.78□□□□□ -0.52
USP39-217ENST00000491659 TMEM127O75204 238 aa11.78□□□□□ -0.52
USP39-217ENST00000491659 CA2P00918 260 aa11.78□□□□□ -0.52
USP39-217ENST00000491659 IGLV1-40P01703 118 aa11.78□□□□□ -0.52
USP39-217ENST00000491659 CHRNA7P36544 502 aa11.78□□□□□ -0.52
USP39-217ENST00000491659 CRIP2P52943 208 aaPredicted RBP11.78□□□□□ -0.52
USP39-217ENST00000491659 TMEM267Q0VDI3 215 aaPredicted RBP11.78□□□□□ -0.52
USP39-217ENST00000491659 RTL8BQ17RB0 113 aa11.78□□□□□ -0.52
USP39-217ENST00000491659 CROCCP3Q8IVE0 287 aa11.78□□□□□ -0.52
USP39-217ENST00000491659 OR5M8Q8NGP6 311 aa11.78□□□□□ -0.52
USP39-217ENST00000491659 OR5H6Q8NGV6 325 aa11.78□□□□□ -0.52
USP39-217ENST00000491659 MYOZ3Q8TDC0 251 aa11.78□□□□□ -0.52
USP39-217ENST00000491659 UBE2E2Q96LR5 201 aa11.78□□□□□ -0.52
USP39-217ENST00000491659 HARBI1Q96MB7 349 aa11.78□□□□□ -0.52
USP39-217ENST00000491659 FOXA2Q9Y261 457 aaPredicted RBP11.78□□□□□ -0.52
USP39-217ENST00000491659 VSIG4Q9Y279 399 aa11.78□□□□□ -0.52
USP39-217ENST00000491659 FBXO7Q9Y3I1 522 aa11.78□□□□□ -0.52
USP39-217ENST00000491659 TGP01266 2768 aa11.78□□□□□ -0.52
USP39-217ENST00000491659 A0A0A6YYH2 397 aa11.77□□□□□ -0.53
USP39-217ENST00000491659 DPPA5A6NC42 116 aa11.77□□□□□ -0.53
USP39-217ENST00000491659 A6NJ64 397 aa11.77□□□□□ -0.53
USP39-217ENST00000491659 FCN1O00602 326 aa11.77□□□□□ -0.53
USP39-217ENST00000491659 SLC25A17O43808 307 aa11.77□□□□□ -0.53
USP39-217ENST00000491659 AIREO43918 545 aa11.77□□□□□ -0.53
USP39-217ENST00000491659 RRASP10301 218 aa11.77□□□□□ -0.53
USP39-217ENST00000491659 CNIH2Q6PI25 160 aa11.77□□□□□ -0.53
USP39-217ENST00000491659 PPP1R27Q86WC6 154 aa11.77□□□□□ -0.53
USP39-217ENST00000491659 MINDY2Q8NBR6 621 aa11.77□□□□□ -0.53
USP39-217ENST00000491659 ARPC1AQ92747 370 aa11.77□□□□□ -0.53
USP39-217ENST00000491659 SLC25A38Q96DW6 304 aa11.77□□□□□ -0.53
USP39-217ENST00000491659 C5orf30Q96GV9 206 aa11.77□□□□□ -0.53
USP39-217ENST00000491659 ADTRPQ96IZ2 230 aa11.77□□□□□ -0.53
USP39-217ENST00000491659 TRAV18A0A075B6X5 111 aa11.76□□□□□ -0.53
USP39-217ENST00000491659 SHOXO15266 292 aa11.76□□□□□ -0.53
USP39-217ENST00000491659 HOXD3P31249 432 aaPredicted RBP11.76□□□□□ -0.53
USP39-217ENST00000491659 LGALS7P47929 136 aa11.76□□□□□ -0.53
USP39-217ENST00000491659 RAB9AP51151 201 aa11.76□□□□□ -0.53
USP39-217ENST00000491659 LUMP51884 338 aaPredicted RBP11.76□□□□□ -0.53
USP39-217ENST00000491659 C19orf54Q5BKX5 351 aa11.76□□□□□ -0.53
USP39-217ENST00000491659 PYHIN1Q6K0P9 492 aa11.76□□□□□ -0.53
USP39-217ENST00000491659 UNQ5815/PRO19632Q6UWF5 114 aa11.76□□□□□ -0.53
USP39-217ENST00000491659 ZNF562Q6V9R5 426 aa11.76□□□□□ -0.53
USP39-217ENST00000491659 ZNF645Q8N7E2 425 aa11.76□□□□□ -0.53
USP39-217ENST00000491659 ZNF491Q8N8L2 437 aa11.76□□□□□ -0.53
USP39-217ENST00000491659 BVESQ8NE79 360 aa11.76□□□□□ -0.53
USP39-217ENST00000491659 YIPF6Q96EC8 236 aa11.76□□□□□ -0.53
USP39-217ENST00000491659 FAM103A1Q9BTL3 118 aaKnown RBP11.76□□□□□ -0.53
USP39-217ENST00000491659 KLK15Q9H2R5 256 aa11.76□□□□□ -0.53
USP39-217ENST00000491659 GNB4Q9HAV0 340 aa11.76□□□□□ -0.53
USP39-217ENST00000491659 DIABLOQ9NR28 239 aa11.76□□□□□ -0.53
USP39-217ENST00000491659 TPSG1Q9NRR2 321 aa11.76□□□□□ -0.53
USP39-217ENST00000491659 ANXA10Q9UJ72 324 aa11.76□□□□□ -0.53
USP39-217ENST00000491659 SPATA2Q9UM82 520 aa11.76□□□□□ -0.53
USP39-217ENST00000491659 J3QRK9 145 aa11.75□□□□□ -0.53
USP39-217ENST00000491659 SSX5O60225 188 aa11.75□□□□□ -0.53
USP39-217ENST00000491659 NFYAP23511 347 aaPredicted RBP11.75□□□□□ -0.53
USP39-217ENST00000491659 CD40LGP29965 261 aa11.75□□□□□ -0.53
USP39-217ENST00000491659 DUTP33316 252 aaKnown RBP11.75□□□□□ -0.53
USP39-217ENST00000491659 RPL5P46777 297 aaKnown RBP11.75□□□□□ -0.53
USP39-217ENST00000491659 ARPC4P59998 168 aa11.75□□□□□ -0.53
USP39-217ENST00000491659 EGFEM1PQ0D2K5 195 aa11.75□□□□□ -0.53
USP39-217ENST00000491659 TMEM177Q53S58 311 aa11.75□□□□□ -0.53
USP39-217ENST00000491659 ACTBL2Q562R1 376 aa11.75□□□□□ -0.53
USP39-217ENST00000491659 OR11H1Q8NG94 326 aa11.75□□□□□ -0.53
USP39-217ENST00000491659 GRPEL2Q8TAA5 225 aa11.75□□□□□ -0.53
USP39-217ENST00000491659 ZMAT5Q9UDW3 170 aaKnown RBP11.75□□□□□ -0.53
USP39-217ENST00000491659 OR2W1Q9Y3N9 320 aa11.75□□□□□ -0.53
USP39-217ENST00000491659 NUBP2Q9Y5Y2 271 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms