RNA–Protein interactions for RNA: ENST00000490207.5

SMC4-222, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 821 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-222ENST00000490207 METTL1Q9UBP6 276 aaKnown RBP15.43■□□□□ 0.06
SMC4-222ENST00000490207 FBXO7Q9Y3I1 522 aa15.43■□□□□ 0.06
SMC4-222ENST00000490207 RBM7Q9Y580 266 aaKnown RBP15.43■□□□□ 0.06
SMC4-222ENST00000490207 TMEM235A6NFC5 223 aa15.42■□□□□ 0.06
SMC4-222ENST00000490207 CRIP2P52943 208 aaPredicted RBP15.42■□□□□ 0.06
SMC4-222ENST00000490207 SCAND1P57086 179 aa15.42■□□□□ 0.06
SMC4-222ENST00000490207 RPS16P62249 146 aaKnown RBP15.42■□□□□ 0.06
SMC4-222ENST00000490207 PSG5Q15238 335 aa15.42■□□□□ 0.06
SMC4-222ENST00000490207 TMEM65Q6PI78 240 aa15.42■□□□□ 0.06
SMC4-222ENST00000490207 H1FOOQ8IZA3 346 aaPredicted RBP15.42■□□□□ 0.06
SMC4-222ENST00000490207 NUDCD2Q8WVJ2 157 aa15.42■□□□□ 0.06
SMC4-222ENST00000490207 C5orf30Q96GV9 206 aa15.42■□□□□ 0.06
SMC4-222ENST00000490207 GAB2Q9UQC2 676 aa15.42■□□□□ 0.06
SMC4-222ENST00000490207 FCN1O00602 326 aa15.41■□□□□ 0.06
SMC4-222ENST00000490207 IGLV1-40P01703 118 aa15.41■□□□□ 0.06
SMC4-222ENST00000490207 GNG2P59768 71 aa15.41■□□□□ 0.06
SMC4-222ENST00000490207 CX3CL1P78423 397 aa15.41■□□□□ 0.06
SMC4-222ENST00000490207 PITPNAQ00169 270 aa15.41■□□□□ 0.06
SMC4-222ENST00000490207 IDNKQ5T6J7 187 aa15.41■□□□□ 0.06
SMC4-222ENST00000490207 FLYWCH2Q96CP2 140 aaKnown RBP15.41■□□□□ 0.06
SMC4-222ENST00000490207 CLCC1Q96S66 551 aa15.41■□□□□ 0.06
SMC4-222ENST00000490207 KLK15Q9H2R5 256 aa15.41■□□□□ 0.06
SMC4-222ENST00000490207 ETV7Q9Y603 341 aa15.41■□□□□ 0.06
SMC4-222ENST00000490207 A3GALT2U3KPV4 340 aa15.41■□□□□ 0.06
SMC4-222ENST00000490207 A0A1W2PN81 502 aa15.4■□□□□ 0.06
SMC4-222ENST00000490207 CA2P00918 260 aa15.4■□□□□ 0.06
SMC4-222ENST00000490207 HOXD3P31249 432 aaPredicted RBP15.4■□□□□ 0.06
SMC4-222ENST00000490207 CHRNA7P36544 502 aa15.4■□□□□ 0.06
SMC4-222ENST00000490207 TIMM50Q3ZCQ8 353 aa15.4■□□□□ 0.06
SMC4-222ENST00000490207 ZNF260Q3ZCT1 412 aa15.4■□□□□ 0.06
SMC4-222ENST00000490207 C19orf54Q5BKX5 351 aa15.4■□□□□ 0.06
SMC4-222ENST00000490207 TCTEX1D1Q8N7M0 179 aa15.4■□□□□ 0.06
SMC4-222ENST00000490207 MINDY2Q8NBR6 621 aa15.4■□□□□ 0.06
SMC4-222ENST00000490207 OR5H6Q8NGV6 325 aa15.4■□□□□ 0.06
SMC4-222ENST00000490207 SLC25A38Q96DW6 304 aa15.4■□□□□ 0.06
SMC4-222ENST00000490207 UBE2E2Q96LR5 201 aa15.4■□□□□ 0.06
SMC4-222ENST00000490207 ST6GALNAC5Q9BVH7 336 aa15.4■□□□□ 0.06
SMC4-222ENST00000490207 DCSTAMPQ9H295 470 aa15.4■□□□□ 0.06
SMC4-222ENST00000490207 VCX3AQ9NNX9 186 aa15.4■□□□□ 0.06
SMC4-222ENST00000490207 SLC25A17O43808 307 aa15.39■□□□□ 0.05
SMC4-222ENST00000490207 TNFAIP8O95379 198 aa15.39■□□□□ 0.05
SMC4-222ENST00000490207 KRTAP10-11P60412 298 aa15.39■□□□□ 0.05
SMC4-222ENST00000490207 EGFEM1PQ0D2K5 195 aa15.39■□□□□ 0.05
SMC4-222ENST00000490207 CBX3Q13185 183 aa15.39■□□□□ 0.05
SMC4-222ENST00000490207 ZNF491Q8N8L2 437 aa15.39■□□□□ 0.05
SMC4-222ENST00000490207 OR5M8Q8NGP6 311 aa15.39■□□□□ 0.05
SMC4-222ENST00000490207 HARBI1Q96MB7 349 aa15.39■□□□□ 0.05
SMC4-222ENST00000490207 FAM103A1Q9BTL3 118 aaKnown RBP15.39■□□□□ 0.05
SMC4-222ENST00000490207 GNB4Q9HAV0 340 aa15.39■□□□□ 0.05
SMC4-222ENST00000490207 TPSG1Q9NRR2 321 aa15.39■□□□□ 0.05
SMC4-222ENST00000490207 FOXA2Q9Y261 457 aaPredicted RBP15.39■□□□□ 0.05
SMC4-222ENST00000490207 VSIG4Q9Y279 399 aa15.39■□□□□ 0.05
SMC4-222ENST00000490207 A0A087WXM4 84 aa15.38■□□□□ 0.05
SMC4-222ENST00000490207 RAB9AP51151 201 aa15.38■□□□□ 0.05
SMC4-222ENST00000490207 TAGLNQ01995 201 aaKnown RBP15.38■□□□□ 0.05
SMC4-222ENST00000490207 TMEM267Q0VDI3 215 aaPredicted RBP15.38■□□□□ 0.05
SMC4-222ENST00000490207 FHL3Q13643 280 aa15.38■□□□□ 0.05
SMC4-222ENST00000490207 RTL8BQ17RB0 113 aa15.38■□□□□ 0.05
SMC4-222ENST00000490207 PPP1R27Q86WC6 154 aa15.38■□□□□ 0.05
SMC4-222ENST00000490207 TSPAN14Q8NG11 270 aa15.38■□□□□ 0.05
SMC4-222ENST00000490207 SSX5O60225 188 aa15.37■□□□□ 0.05
SMC4-222ENST00000490207 SOX15O60248 233 aa15.37■□□□□ 0.05
SMC4-222ENST00000490207 CTXN2P0C2S0 81 aa15.37■□□□□ 0.05
SMC4-222ENST00000490207 EGR2P11161 476 aaPredicted RBP15.37■□□□□ 0.05
SMC4-222ENST00000490207 KIAA0141Q14154 515 aaPredicted RBP15.37■□□□□ 0.05
SMC4-222ENST00000490207 UNQ5815/PRO19632Q6UWF5 114 aa15.37■□□□□ 0.05
SMC4-222ENST00000490207 ZNF562Q6V9R5 426 aa15.37■□□□□ 0.05
SMC4-222ENST00000490207 BVESQ8NE79 360 aa15.37■□□□□ 0.05
SMC4-222ENST00000490207 OR11H1Q8NG94 326 aa15.37■□□□□ 0.05
SMC4-222ENST00000490207 ARPC1AQ92747 370 aa15.37■□□□□ 0.05
SMC4-222ENST00000490207 ADTRPQ96IZ2 230 aa15.37■□□□□ 0.05
SMC4-222ENST00000490207 NUBP2Q9Y5Y2 271 aa15.37■□□□□ 0.05
SMC4-222ENST00000490207 I3L521 148 aa15.36■□□□□ 0.05
SMC4-222ENST00000490207 K7EIL1 84 aa15.36■□□□□ 0.05
SMC4-222ENST00000490207 SHOXO15266 292 aa15.36■□□□□ 0.05
SMC4-222ENST00000490207 AIREO43918 545 aa15.36■□□□□ 0.05
SMC4-222ENST00000490207 IGLV2-23P01705 113 aa15.36■□□□□ 0.05
SMC4-222ENST00000490207 RRASP10301 218 aa15.36■□□□□ 0.05
SMC4-222ENST00000490207 NFYAP23511 347 aaPredicted RBP15.36■□□□□ 0.05
SMC4-222ENST00000490207 DUTP33316 252 aaKnown RBP15.36■□□□□ 0.05
SMC4-222ENST00000490207 TGFBR1P36897 503 aa15.36■□□□□ 0.05
SMC4-222ENST00000490207 RUNX1Q01196 453 aa15.36■□□□□ 0.05
SMC4-222ENST00000490207 TMEM177Q53S58 311 aa15.36■□□□□ 0.05
SMC4-222ENST00000490207 ACTBL2Q562R1 376 aa15.36■□□□□ 0.05
SMC4-222ENST00000490207 CNIH2Q6PI25 160 aa15.36■□□□□ 0.05
SMC4-222ENST00000490207 ZNF645Q8N7E2 425 aa15.36■□□□□ 0.05
SMC4-222ENST00000490207 YIPF6Q96EC8 236 aa15.36■□□□□ 0.05
SMC4-222ENST00000490207 OR5B12Q96R08 314 aa15.36■□□□□ 0.05
SMC4-222ENST00000490207 OR2W1Q9Y3N9 320 aa15.36■□□□□ 0.05
SMC4-222ENST00000490207 TRAV18A0A075B6X5 111 aa15.35■□□□□ 0.05
SMC4-222ENST00000490207 A0A0A6YYH2 397 aa15.35■□□□□ 0.05
SMC4-222ENST00000490207 A6NJ64 397 aa15.35■□□□□ 0.05
SMC4-222ENST00000490207 J3QRK9 145 aa15.35■□□□□ 0.05
SMC4-222ENST00000490207 TMEM127O75204 238 aa15.35■□□□□ 0.05
SMC4-222ENST00000490207 LGALS7P47929 136 aa15.35■□□□□ 0.05
SMC4-222ENST00000490207 LUMP51884 338 aaPredicted RBP15.35■□□□□ 0.05
SMC4-222ENST00000490207 GNB1P62873 340 aa15.35■□□□□ 0.05
SMC4-222ENST00000490207 PYHIN1Q6K0P9 492 aa15.35■□□□□ 0.05
SMC4-222ENST00000490207 LFNGQ8NES3 379 aa15.35■□□□□ 0.05
SMC4-222ENST00000490207 GRPEL2Q8TAA5 225 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms