RNA–Protein interactions for RNA: ENST00000489892.1

TRIM40-208, Transcript of tripartite motif containing 40, humanhuman

TSL 3

Gene TRIM40, Length 941 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-208ENST00000489892 FAM74A1Q5RGS3 127 aa9.64□□□□□ -0.87
TRIM40-208ENST00000489892 C10orf91Q5T1B1 145 aa9.64□□□□□ -0.87
TRIM40-208ENST00000489892 GGNBP1Q5YKI7 109 aa9.64□□□□□ -0.87
TRIM40-208ENST00000489892 LYPD2Q6UXB3 125 aa9.64□□□□□ -0.87
TRIM40-208ENST00000489892 TPRX1Q8N7U7 411 aa9.64□□□□□ -0.87
TRIM40-208ENST00000489892 OR1S2Q8NGQ3 325 aa9.64□□□□□ -0.87
TRIM40-208ENST00000489892 OR1L1Q8NH94 360 aa9.64□□□□□ -0.87
TRIM40-208ENST00000489892 C8orf46Q8TAG6 207 aa9.64□□□□□ -0.87
TRIM40-208ENST00000489892 OR10C1Q96KK4 312 aa9.64□□□□□ -0.87
TRIM40-208ENST00000489892 DCTN5Q9BTE1 182 aa9.64□□□□□ -0.87
TRIM40-208ENST00000489892 RSRP1Q9BUV0 290 aa9.64□□□□□ -0.87
TRIM40-208ENST00000489892 SSBP3Q9BWW4 388 aaPredicted RBP9.64□□□□□ -0.87
TRIM40-208ENST00000489892 PARP11Q9NR21 331 aa9.64□□□□□ -0.87
TRIM40-208ENST00000489892 IDI2-AS1Q9NZ38 188 aa9.64□□□□□ -0.87
TRIM40-208ENST00000489892 OR5AC2Q9NZP5 309 aa9.64□□□□□ -0.87
TRIM40-208ENST00000489892 CTSZQ9UBR2 303 aa9.64□□□□□ -0.87
TRIM40-208ENST00000489892 TRAV39A0A0B4J263 110 aa9.63□□□□□ -0.87
TRIM40-208ENST00000489892 TMEM218A2RU14 115 aa9.63□□□□□ -0.87
TRIM40-208ENST00000489892 GPR137BO60478 399 aa9.63□□□□□ -0.87
TRIM40-208ENST00000489892 LY6HO94772 140 aa9.63□□□□□ -0.87
TRIM40-208ENST00000489892 ATG12O94817 140 aa9.63□□□□□ -0.87
TRIM40-208ENST00000489892 LIPFP07098 398 aa9.63□□□□□ -0.87
TRIM40-208ENST00000489892 CGB3P0DN86 165 aa9.63□□□□□ -0.87
TRIM40-208ENST00000489892 CGB7P0DN87 165 aa9.63□□□□□ -0.87
TRIM40-208ENST00000489892 HKR1P10072 659 aa9.63□□□□□ -0.87
TRIM40-208ENST00000489892 RPL12P30050 165 aaKnown RBP9.63□□□□□ -0.87
TRIM40-208ENST00000489892 P2RY1P47900 373 aa9.63□□□□□ -0.87
TRIM40-208ENST00000489892 WDR25Q64LD2 544 aaPredicted RBP9.63□□□□□ -0.87
TRIM40-208ENST00000489892 FAM122CQ6P4D5 195 aa9.63□□□□□ -0.87
TRIM40-208ENST00000489892 DUX4L9Q6RFH8 374 aaPredicted RBP9.63□□□□□ -0.87
TRIM40-208ENST00000489892 HEPN1Q6WQI6 88 aa9.63□□□□□ -0.87
TRIM40-208ENST00000489892 LRRC75A-AS1Q8N1F1 130 aa9.63□□□□□ -0.87
TRIM40-208ENST00000489892 UBAC2Q8NBM4 344 aa9.63□□□□□ -0.87
TRIM40-208ENST00000489892 ZNF436-AS1Q8NC38 126 aaPredicted RBP9.63□□□□□ -0.87
TRIM40-208ENST00000489892 BPIFCQ8NFQ6 507 aa9.63□□□□□ -0.87
TRIM40-208ENST00000489892 SECTM1Q8WVN6 248 aa9.63□□□□□ -0.87
TRIM40-208ENST00000489892 RTN4IP1Q8WWV3 396 aaPredicted RBP9.63□□□□□ -0.87
TRIM40-208ENST00000489892 CYYR1Q96J86 154 aa9.63□□□□□ -0.87
TRIM40-208ENST00000489892 SEC11CQ9BY50 192 aa9.63□□□□□ -0.87
TRIM40-208ENST00000489892 SLC2A9Q9NRM0 540 aa9.63□□□□□ -0.87
TRIM40-208ENST00000489892 GFOD1Q9NXC2 390 aa9.63□□□□□ -0.87
TRIM40-208ENST00000489892 ARID1AO14497 2285 aa9.62□□□□□ -0.87
TRIM40-208ENST00000489892 DSCAML1Q8TD84 2053 aa9.62□□□□□ -0.87
TRIM40-208ENST00000489892 ENSAO43768 121 aaKnown RBP9.62□□□□□ -0.87
TRIM40-208ENST00000489892 FOXH1O75593 365 aa9.62□□□□□ -0.87
TRIM40-208ENST00000489892 SNAPINO95295 136 aa9.62□□□□□ -0.87
TRIM40-208ENST00000489892 SEC11BP0C7V7 166 aa9.62□□□□□ -0.87
TRIM40-208ENST00000489892 MMP9P14780 707 aa9.62□□□□□ -0.87
TRIM40-208ENST00000489892 SLC25A16P16260 332 aa9.62□□□□□ -0.87
TRIM40-208ENST00000489892 PI3P19957 117 aa9.62□□□□□ -0.87
TRIM40-208ENST00000489892 F2RL1P55085 397 aa9.62□□□□□ -0.87
TRIM40-208ENST00000489892 CATR1Q13166 79 aa9.62□□□□□ -0.87
TRIM40-208ENST00000489892 BTN1A1Q13410 526 aa9.62□□□□□ -0.87
TRIM40-208ENST00000489892 TMEM268Q5VZI3 342 aa9.62□□□□□ -0.87
TRIM40-208ENST00000489892 TMEM200BQ69YZ2 307 aa9.62□□□□□ -0.87
TRIM40-208ENST00000489892 ZNF841Q6ZN19 808 aa9.62□□□□□ -0.87
TRIM40-208ENST00000489892 ZNF525Q8N782 197 aa9.62□□□□□ -0.87
TRIM40-208ENST00000489892 ZNF645Q8N7E2 425 aa9.62□□□□□ -0.87
TRIM40-208ENST00000489892 TCTEX1D1Q8N7M0 179 aa9.62□□□□□ -0.87
TRIM40-208ENST00000489892 C8orf31Q8N9H6 132 aa9.62□□□□□ -0.87
TRIM40-208ENST00000489892 RFESDQ8TAC1 157 aa9.62□□□□□ -0.87
TRIM40-208ENST00000489892 IL22RA2Q969J5 263 aa9.62□□□□□ -0.87
TRIM40-208ENST00000489892 RRNAD1Q96FB5 475 aaKnown RBP9.62□□□□□ -0.87
TRIM40-208ENST00000489892 C18orf12Q96KH6 178 aa9.62□□□□□ -0.87
TRIM40-208ENST00000489892 TSNAXQ99598 290 aaKnown RBP9.62□□□□□ -0.87
TRIM40-208ENST00000489892 ARV1Q9H2C2 271 aa9.62□□□□□ -0.87
TRIM40-208ENST00000489892 C19orf12Q9NSK7 152 aa9.62□□□□□ -0.87
TRIM40-208ENST00000489892 OR1A1Q9P1Q5 309 aa9.62□□□□□ -0.87
TRIM40-208ENST00000489892 RPUSD1Q9UJJ7 312 aaKnown RBP9.62□□□□□ -0.87
TRIM40-208ENST00000489892 KCNS2Q9ULS6 477 aa9.62□□□□□ -0.87
TRIM40-208ENST00000489892 STRAPQ9Y3F4 350 aaKnown RBP9.62□□□□□ -0.87
TRIM40-208ENST00000489892 DOCK11Q5JSL3 2073 aa9.62□□□□□ -0.87
TRIM40-208ENST00000489892 LOC105371242A0A075B767 164 aa9.61□□□□□ -0.87
TRIM40-208ENST00000489892 MSGN1A6NI15 193 aa9.61□□□□□ -0.87
TRIM40-208ENST00000489892 ZNF705EA8MWA4 302 aaPredicted RBP9.61□□□□□ -0.87
TRIM40-208ENST00000489892 M0R1W7 72 aa9.61□□□□□ -0.87
TRIM40-208ENST00000489892 ST8SIA3O43173 380 aa9.61□□□□□ -0.87
TRIM40-208ENST00000489892 NDUFS7O75251 213 aa9.61□□□□□ -0.87
TRIM40-208ENST00000489892 IGHV2-5P01817 119 aa9.61□□□□□ -0.87
TRIM40-208ENST00000489892 FAM157CP0CG43 387 aa9.61□□□□□ -0.87
TRIM40-208ENST00000489892 PVALBP20472 110 aaPredicted RBP9.61□□□□□ -0.87
TRIM40-208ENST00000489892 LOXL3P58215 753 aa9.61□□□□□ -0.87
TRIM40-208ENST00000489892 C17orf58Q2M2W7 97 aa9.61□□□□□ -0.87
TRIM40-208ENST00000489892 MORN2Q502X0 79 aa9.61□□□□□ -0.87
TRIM40-208ENST00000489892 KIR3DL3Q8N743 410 aa9.61□□□□□ -0.87
TRIM40-208ENST00000489892 CLRN3Q8NCR9 226 aa9.61□□□□□ -0.87
TRIM40-208ENST00000489892 OR52L2PQ8NGH6 319 aa9.61□□□□□ -0.87
TRIM40-208ENST00000489892 TMED6Q8WW62 240 aa9.61□□□□□ -0.87
TRIM40-208ENST00000489892 TNFRSF14Q92956 283 aa9.61□□□□□ -0.87
TRIM40-208ENST00000489892 MBD6Q96DN6 1003 aa9.61□□□□□ -0.87
TRIM40-208ENST00000489892 NARS2Q96I59 477 aaKnown RBP9.61□□□□□ -0.87
TRIM40-208ENST00000489892 ABHD14AQ9BUJ0 271 aa9.61□□□□□ -0.87
TRIM40-208ENST00000489892 BPESC1Q9GZL8 116 aa9.61□□□□□ -0.87
TRIM40-208ENST00000489892 LIME1Q9H400 295 aa9.61□□□□□ -0.87
TRIM40-208ENST00000489892 FAM212BQ9NTI7 297 aaPredicted RBP9.61□□□□□ -0.87
TRIM40-208ENST00000489892 LIN7CQ9NUP9 197 aaKnown RBP9.61□□□□□ -0.87
TRIM40-208ENST00000489892 GSKIPQ9P0R6 139 aa9.61□□□□□ -0.87
TRIM40-208ENST00000489892 GAB2Q9UQC2 676 aa9.61□□□□□ -0.87
TRIM40-208ENST00000489892 MALRD1Q5VYJ5 2156 aa9.61□□□□□ -0.87
TRIM40-208ENST00000489892 FLNAP21333 2647 aaKnown RBP9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms