RNA–Protein interactions for RNA: ENST00000488864.5

CHD1L-208, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 2

Gene CHD1L, Length 2,415 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-208ENST00000488864 MSL2Q9HCI7 577 aa11.15□□□□□ -0.63
CHD1L-208ENST00000488864 A0A1B0GU03 582 aa11.14□□□□□ -0.63
CHD1L-208ENST00000488864 ZFP92A6NM28 416 aa11.14□□□□□ -0.63
CHD1L-208ENST00000488864 ANKRD30BLA7E2S9 258 aa11.14□□□□□ -0.63
CHD1L-208ENST00000488864 TNFSF12O43508 249 aa11.14□□□□□ -0.63
CHD1L-208ENST00000488864 IFNA10P01566 189 aa11.14□□□□□ -0.63
CHD1L-208ENST00000488864 PAX1P15863 534 aa11.14□□□□□ -0.63
CHD1L-208ENST00000488864 TAS2R30P59541 319 aa11.14□□□□□ -0.63
CHD1L-208ENST00000488864 ID3Q02535 119 aa11.14□□□□□ -0.63
CHD1L-208ENST00000488864 TMEM42Q69YG0 159 aa11.14□□□□□ -0.63
CHD1L-208ENST00000488864 ZNF818PQ6ZRF7 136 aa11.14□□□□□ -0.63
CHD1L-208ENST00000488864 SSX8Q7RTT4 187 aa11.14□□□□□ -0.63
CHD1L-208ENST00000488864 VSIRQ9H7M9 311 aa11.14□□□□□ -0.63
CHD1L-208ENST00000488864 SMCO3A2RU48 225 aa11.14□□□□□ -0.63
CHD1L-208ENST00000488864 B4DEV8 164 aa11.14□□□□□ -0.63
CHD1L-208ENST00000488864 SHISA9B4DS77 424 aa11.14□□□□□ -0.63
CHD1L-208ENST00000488864 CLDN34H7C241 214 aa11.14□□□□□ -0.63
CHD1L-208ENST00000488864 PDCD6O75340 191 aa11.14□□□□□ -0.63
CHD1L-208ENST00000488864 SNRPCP09234 159 aaKnown RBP11.14□□□□□ -0.63
CHD1L-208ENST00000488864 CNN3Q15417 329 aaKnown RBP11.14□□□□□ -0.63
CHD1L-208ENST00000488864 ATP5SQ99766 215 aa11.14□□□□□ -0.63
CHD1L-208ENST00000488864 MRPL37Q9BZE1 423 aaKnown RBP11.14□□□□□ -0.63
CHD1L-208ENST00000488864 FGF23Q9GZV9 251 aaPredicted RBP11.14□□□□□ -0.63
CHD1L-208ENST00000488864 ZNF442Q9H7R0 627 aa11.14□□□□□ -0.63
CHD1L-208ENST00000488864 ZNF665Q9H7R5 613 aa11.14□□□□□ -0.63
CHD1L-208ENST00000488864 IGKV1D-13A0A0B4J2D9 117 aa11.13□□□□□ -0.63
CHD1L-208ENST00000488864 DEFB108AA8MXU0 73 aa11.13□□□□□ -0.63
CHD1L-208ENST00000488864 H3BP45 60 aa11.13□□□□□ -0.63
CHD1L-208ENST00000488864 HBE1P02100 147 aa11.13□□□□□ -0.63
CHD1L-208ENST00000488864 CD3EP07766 207 aa11.13□□□□□ -0.63
CHD1L-208ENST00000488864 IGKV1-13P0DP09 117 aa11.13□□□□□ -0.63
CHD1L-208ENST00000488864 SELEP16581 610 aa11.13□□□□□ -0.63
CHD1L-208ENST00000488864 GPM6AP51674 278 aa11.13□□□□□ -0.63
CHD1L-208ENST00000488864 FGF8P55075 233 aaPredicted RBP11.13□□□□□ -0.63
CHD1L-208ENST00000488864 CD81P60033 236 aa11.13□□□□□ -0.63
CHD1L-208ENST00000488864 SRPXP78539 464 aa11.13□□□□□ -0.63
CHD1L-208ENST00000488864 ZNF124Q15973 351 aa11.13□□□□□ -0.63
CHD1L-208ENST00000488864 NMSQ5H8A3 153 aa11.13□□□□□ -0.63
CHD1L-208ENST00000488864 ZDHHC23Q8IYP9 409 aa11.13□□□□□ -0.63
CHD1L-208ENST00000488864 GAPTQ8N292 157 aa11.13□□□□□ -0.63
CHD1L-208ENST00000488864 OR4X1Q8NH49 305 aa11.13□□□□□ -0.63
CHD1L-208ENST00000488864 IQCF6A8MYZ5 107 aa11.13□□□□□ -0.63
CHD1L-208ENST00000488864 CYB5R3P00387 301 aaPredicted RBP11.13□□□□□ -0.63
CHD1L-208ENST00000488864 NPBWR2P48146 333 aa11.13□□□□□ -0.63
CHD1L-208ENST00000488864 MBNL2Q5VZF2 373 aaKnown RBP11.13□□□□□ -0.63
CHD1L-208ENST00000488864 LHFPL2Q6ZUX7 228 aa11.13□□□□□ -0.63
CHD1L-208ENST00000488864 SSX7Q7RTT5 188 aa11.13□□□□□ -0.63
CHD1L-208ENST00000488864 OR10G4Q8NGN3 311 aa11.13□□□□□ -0.63
CHD1L-208ENST00000488864 OR5R1Q8NH85 324 aa11.13□□□□□ -0.63
CHD1L-208ENST00000488864 SPIN2AQ99865 258 aa11.13□□□□□ -0.63
CHD1L-208ENST00000488864 SPIN2BQ9BPZ2 258 aa11.13□□□□□ -0.63
CHD1L-208ENST00000488864 RSG1Q9BU20 258 aa11.13□□□□□ -0.63
CHD1L-208ENST00000488864 HELZ2Q9BYK8 2649 aaKnown RBP11.12□□□□□ -0.63
CHD1L-208ENST00000488864 CD55P08174 381 aa11.12□□□□□ -0.63
CHD1L-208ENST00000488864 SCTP09683 121 aa11.12□□□□□ -0.63
CHD1L-208ENST00000488864 OR4A8P0C604 315 aa11.12□□□□□ -0.63
CHD1L-208ENST00000488864 GZMBP10144 247 aa11.12□□□□□ -0.63
CHD1L-208ENST00000488864 MMP9P14780 707 aa11.12□□□□□ -0.63
CHD1L-208ENST00000488864 KLF3P57682 345 aaPredicted RBP11.12□□□□□ -0.63
CHD1L-208ENST00000488864 BAXQ07812 192 aa11.12□□□□□ -0.63
CHD1L-208ENST00000488864 TMEM267Q0VDI3 215 aaPredicted RBP11.12□□□□□ -0.63
CHD1L-208ENST00000488864 ZNF726P1Q15940 193 aa11.12□□□□□ -0.63
CHD1L-208ENST00000488864 LCN15Q6UWW0 184 aa11.12□□□□□ -0.63
CHD1L-208ENST00000488864 Q6ZR03 302 aa11.12□□□□□ -0.63
CHD1L-208ENST00000488864 ZNF295-AS1Q8N0V1 137 aa11.12□□□□□ -0.63
CHD1L-208ENST00000488864 SDF2L1Q9HCN8 221 aa11.12□□□□□ -0.63
CHD1L-208ENST00000488864 RPRMQ9NS64 109 aa11.12□□□□□ -0.63
CHD1L-208ENST00000488864 CISD1Q9NZ45 108 aaKnown RBP11.12□□□□□ -0.63
CHD1L-208ENST00000488864 TAAR3PQ9P1P4 343 aa11.12□□□□□ -0.63
CHD1L-208ENST00000488864 RNF115Q9Y4L5 304 aa11.12□□□□□ -0.63
CHD1L-208ENST00000488864 A0A0G2JRQ6 117 aa11.11□□□□□ -0.63
CHD1L-208ENST00000488864 E7EQL1 145 aa11.11□□□□□ -0.63
CHD1L-208ENST00000488864 OR7C1O76099 320 aaPredicted RBP11.11□□□□□ -0.63
CHD1L-208ENST00000488864 RBM11P57052 281 aaKnown RBP11.11□□□□□ -0.63
CHD1L-208ENST00000488864 ADIPOQQ15848 244 aa11.11□□□□□ -0.63
CHD1L-208ENST00000488864 DPPA3Q6W0C5 159 aa11.11□□□□□ -0.63
CHD1L-208ENST00000488864 CALHM1Q8IU99 346 aa11.11□□□□□ -0.63
CHD1L-208ENST00000488864 FAM185AQ8N0U4 392 aa11.11□□□□□ -0.63
CHD1L-208ENST00000488864 ZNF664Q8N3J9 261 aa11.11□□□□□ -0.63
CHD1L-208ENST00000488864 NUP37Q8NFH4 326 aa11.11□□□□□ -0.63
CHD1L-208ENST00000488864 C2orf88Q9BSF0 95 aa11.11□□□□□ -0.63
CHD1L-208ENST00000488864 CABLES2Q9BTV7 478 aa11.11□□□□□ -0.63
CHD1L-208ENST00000488864 HIPK2Q9H2X6 1198 aa11.11□□□□□ -0.63
CHD1L-208ENST00000488864 CCL28Q9NRJ3 127 aa11.11□□□□□ -0.63
CHD1L-208ENST00000488864 TENM4Q6N022 2769 aa11.11□□□□□ -0.63
CHD1L-208ENST00000488864 CACNA1DQ01668 2161 aa11.11□□□□□ -0.63
CHD1L-208ENST00000488864 TRAV1-1A0A0B4J248 108 aa11.11□□□□□ -0.63
CHD1L-208ENST00000488864 A1L4Q6 167 aa11.11□□□□□ -0.63
CHD1L-208ENST00000488864 CLEC18AA5D8T8 446 aa11.11□□□□□ -0.63
CHD1L-208ENST00000488864 MLNRO43193 412 aa11.11□□□□□ -0.63
CHD1L-208ENST00000488864 AMBPP02760 352 aa11.11□□□□□ -0.63
CHD1L-208ENST00000488864 BCL2P10415 239 aa11.11□□□□□ -0.63
CHD1L-208ENST00000488864 KITLGP21583 273 aa11.11□□□□□ -0.63
CHD1L-208ENST00000488864 IL24Q13007 206 aa11.11□□□□□ -0.63
CHD1L-208ENST00000488864 JOSD1Q15040 202 aaPredicted RBP11.11□□□□□ -0.63
CHD1L-208ENST00000488864 SSX2Q16385 188 aa11.11□□□□□ -0.63
CHD1L-208ENST00000488864 IZUMO4Q1ZYL8 232 aa11.11□□□□□ -0.63
CHD1L-208ENST00000488864 CLEC18CQ8NCF0 446 aa11.11□□□□□ -0.63
CHD1L-208ENST00000488864 RNASE11Q8TAA1 199 aaKnown RBP11.11□□□□□ -0.63
CHD1L-208ENST00000488864 HIST1H2AAQ96QV6 131 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms