RNA–Protein interactions for RNA: ENST00000488427.1

ITGB1-214, Transcript of integrin subunit beta 1, humanhuman

TSL 1 (best)

Gene ITGB1, Length 861 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-214ENST00000488427 SDHAF3Q9NRP4 125 aa2.04□□□□□ -2.08
ITGB1-214ENST00000488427 LYARQ9NX58 379 aaKnown RBP2.04□□□□□ -2.08
ITGB1-214ENST00000488427 EMC3Q9P0I2 261 aa2.04□□□□□ -2.08
ITGB1-214ENST00000488427 NOSIPQ9Y314 301 aaKnown RBP2.04□□□□□ -2.08
ITGB1-214ENST00000488427 DSPPQ9NZW4 1301 aa2.03□□□□□ -2.08
ITGB1-214ENST00000488427 IQCF5A8MTL0 148 aa2.03□□□□□ -2.08
ITGB1-214ENST00000488427 H3BSH0 61 aa2.03□□□□□ -2.08
ITGB1-214ENST00000488427 MFNGO00587 321 aa2.03□□□□□ -2.08
ITGB1-214ENST00000488427 ACOX3O15254 700 aa2.03□□□□□ -2.08
ITGB1-214ENST00000488427 OR1I1O60431 355 aa2.03□□□□□ -2.08
ITGB1-214ENST00000488427 MRPL33O75394 65 aaKnown RBP2.03□□□□□ -2.08
ITGB1-214ENST00000488427 HBE1P02100 147 aa2.03□□□□□ -2.08
ITGB1-214ENST00000488427 CLPSP04118 112 aa2.03□□□□□ -2.08
ITGB1-214ENST00000488427 IGLV7-43P04211 117 aa2.03□□□□□ -2.08
ITGB1-214ENST00000488427 CALB1P05937 261 aa2.03□□□□□ -2.08
ITGB1-214ENST00000488427 SERPINA6P08185 405 aa2.03□□□□□ -2.08
ITGB1-214ENST00000488427 HIST1H1TP22492 207 aaPredicted RBP2.03□□□□□ -2.08
ITGB1-214ENST00000488427 IL12BP29460 328 aa2.03□□□□□ -2.08
ITGB1-214ENST00000488427 MIPP30301 263 aa2.03□□□□□ -2.08
ITGB1-214ENST00000488427 HMOX2P30519 316 aa2.03□□□□□ -2.08
ITGB1-214ENST00000488427 PFN2P35080 140 aa2.03□□□□□ -2.08
ITGB1-214ENST00000488427 GLRXP35754 106 aa2.03□□□□□ -2.08
ITGB1-214ENST00000488427 SYKP43405 635 aa2.03□□□□□ -2.08
ITGB1-214ENST00000488427 TBPL1P62380 186 aa2.03□□□□□ -2.08
ITGB1-214ENST00000488427 RBX1P62877 108 aa2.03□□□□□ -2.08
ITGB1-214ENST00000488427 LIPEQ05469 1076 aa2.03□□□□□ -2.08
ITGB1-214ENST00000488427 ZNF266Q14584 549 aa2.03□□□□□ -2.08
ITGB1-214ENST00000488427 LRRC75BQ2VPJ9 315 aa2.03□□□□□ -2.08
ITGB1-214ENST00000488427 MAJINQ3KP22 176 aa2.03□□□□□ -2.08
ITGB1-214ENST00000488427 CCDC183Q5T5S1 534 aa2.03□□□□□ -2.08
ITGB1-214ENST00000488427 C1orf134Q5TEV5 83 aa2.03□□□□□ -2.08
ITGB1-214ENST00000488427 LRRC28Q86X40 367 aaPredicted RBP2.03□□□□□ -2.08
ITGB1-214ENST00000488427 KRT222Q8N1A0 295 aa2.03□□□□□ -2.08
ITGB1-214ENST00000488427 ZNF664Q8N3J9 261 aa2.03□□□□□ -2.08
ITGB1-214ENST00000488427 OR2Z1Q8NG97 314 aa2.03□□□□□ -2.08
ITGB1-214ENST00000488427 OR8B3Q8NGG8 313 aa2.03□□□□□ -2.08
ITGB1-214ENST00000488427 OR52E4Q8NGH9 312 aa2.03□□□□□ -2.08
ITGB1-214ENST00000488427 OR9G4Q8NGQ1 327 aa2.03□□□□□ -2.08
ITGB1-214ENST00000488427 ANKRD7Q92527 254 aa2.03□□□□□ -2.08
ITGB1-214ENST00000488427 WDR34Q96EX3 536 aa2.03□□□□□ -2.08
ITGB1-214ENST00000488427 RNF145Q96MT1 663 aa2.03□□□□□ -2.08
ITGB1-214ENST00000488427 OR8B2Q96RD0 313 aa2.03□□□□□ -2.08
ITGB1-214ENST00000488427 TEAD3Q99594 435 aa2.03□□□□□ -2.08
ITGB1-214ENST00000488427 AICDAQ9GZX7 198 aa2.03□□□□□ -2.08
ITGB1-214ENST00000488427 TUBA4BQ9H853 241 aa2.03□□□□□ -2.08
ITGB1-214ENST00000488427 CRLF2Q9HC73 371 aa2.03□□□□□ -2.08
ITGB1-214ENST00000488427 TAAR3PQ9P1P4 343 aa2.03□□□□□ -2.08
ITGB1-214ENST00000488427 CLN8Q9UBY8 286 aa2.03□□□□□ -2.08
ITGB1-214ENST00000488427 NCBP2LA6PVI3 153 aaKnown RBP2.02□□□□□ -2.09
ITGB1-214ENST00000488427 VGLL3A8MV65 326 aa2.02□□□□□ -2.09
ITGB1-214ENST00000488427 PLPP1O14494 284 aa2.02□□□□□ -2.09
ITGB1-214ENST00000488427 PHYHO14832 338 aa2.02□□□□□ -2.09
ITGB1-214ENST00000488427 NPFFO15130 113 aa2.02□□□□□ -2.09
ITGB1-214ENST00000488427 TGOLN2O43493 480 aa2.02□□□□□ -2.09
ITGB1-214ENST00000488427 OR7C2O60412 319 aa2.02□□□□□ -2.09
ITGB1-214ENST00000488427 PSIP1O75475 530 aaKnown RBP2.02□□□□□ -2.09
ITGB1-214ENST00000488427 IMPA1P29218 277 aa2.02□□□□□ -2.09
ITGB1-214ENST00000488427 EVI2BP34910 448 aa2.02□□□□□ -2.09
ITGB1-214ENST00000488427 CRATP43155 626 aa2.02□□□□□ -2.09
ITGB1-214ENST00000488427 RAB13P51153 203 aa2.02□□□□□ -2.09
ITGB1-214ENST00000488427 KLF3P57682 345 aaPredicted RBP2.02□□□□□ -2.09
ITGB1-214ENST00000488427 PAFAH1B3Q15102 231 aaKnown RBP2.02□□□□□ -2.09
ITGB1-214ENST00000488427 STEAP4Q687X5 459 aa2.02□□□□□ -2.09
ITGB1-214ENST00000488427 NCBP2-AS2Q69YL0 99 aa2.02□□□□□ -2.09
ITGB1-214ENST00000488427 OR2W3Q7Z3T1 314 aa2.02□□□□□ -2.09
ITGB1-214ENST00000488427 JAGN1Q8N5M9 183 aa2.02□□□□□ -2.09
ITGB1-214ENST00000488427 SLC26A10Q8NG04 563 aa2.02□□□□□ -2.09
ITGB1-214ENST00000488427 OR1L1Q8NH94 360 aa2.02□□□□□ -2.09
ITGB1-214ENST00000488427 FAM81AQ8TBF8 368 aa2.02□□□□□ -2.09
ITGB1-214ENST00000488427 ZNF75CPQ92670 426 aaPredicted RBP2.02□□□□□ -2.09
ITGB1-214ENST00000488427 TMBIM1Q969X1 311 aa2.02□□□□□ -2.09
ITGB1-214ENST00000488427 PRRC1Q96M27 445 aa2.02□□□□□ -2.09
ITGB1-214ENST00000488427 GPR82Q96P67 336 aa2.02□□□□□ -2.09
ITGB1-214ENST00000488427 TMEM243Q9BU79 118 aa2.02□□□□□ -2.09
ITGB1-214ENST00000488427 SAMD10Q9BYL1 202 aa2.02□□□□□ -2.09
ITGB1-214ENST00000488427 ACTR3CQ9C0K3 210 aaPredicted RBP2.02□□□□□ -2.09
ITGB1-214ENST00000488427 SLIRPQ9GZT3 109 aaKnown RBP2.02□□□□□ -2.09
ITGB1-214ENST00000488427 PIGUQ9H490 435 aa2.02□□□□□ -2.09
ITGB1-214ENST00000488427 TMEM38AQ9H6F2 299 aa2.02□□□□□ -2.09
ITGB1-214ENST00000488427 LYRM4Q9HD34 91 aa2.02□□□□□ -2.09
ITGB1-214ENST00000488427 CLN6Q9NWW5 311 aa2.02□□□□□ -2.09
ITGB1-214ENST00000488427 DCAF16Q9NXF7 216 aa2.02□□□□□ -2.09
ITGB1-214ENST00000488427 TAS2R1Q9NYW7 299 aa2.02□□□□□ -2.09
ITGB1-214ENST00000488427 ZNF230Q9UIE0 474 aaPredicted RBP2.02□□□□□ -2.09
ITGB1-214ENST00000488427 CFL2Q9Y281 166 aa2.02□□□□□ -2.09
ITGB1-214ENST00000488427 CARHSP1Q9Y2V2 147 aaKnown RBP2.02□□□□□ -2.09
ITGB1-214ENST00000488427 SMIM26A0A096LP01 95 aa2.01□□□□□ -2.09
ITGB1-214ENST00000488427 ARPC4-TTLL3A0A0A6YYG9 625 aa2.01□□□□□ -2.09
ITGB1-214ENST00000488427 A0A1W2PRD5 423 aa2.01□□□□□ -2.09
ITGB1-214ENST00000488427 A0A1W2PRF3 423 aa2.01□□□□□ -2.09
ITGB1-214ENST00000488427 A0A1W2PRM7 423 aa2.01□□□□□ -2.09
ITGB1-214ENST00000488427 K7EMT4 169 aa2.01□□□□□ -2.09
ITGB1-214ENST00000488427 M0R3G1 203 aa2.01□□□□□ -2.09
ITGB1-214ENST00000488427 GPR171O14626 319 aa2.01□□□□□ -2.09
ITGB1-214ENST00000488427 P0C880 135 aa2.01□□□□□ -2.09
ITGB1-214ENST00000488427 OR8G3PP0DMU2 310 aa2.01□□□□□ -2.09
ITGB1-214ENST00000488427 RAB4AP20338 218 aa2.01□□□□□ -2.09
ITGB1-214ENST00000488427 CPN2P22792 545 aa2.01□□□□□ -2.09
ITGB1-214ENST00000488427 MSNP26038 577 aaKnown RBP2.01□□□□□ -2.09
ITGB1-214ENST00000488427 RPL22P35268 128 aaKnown RBP2.01□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms