RNA–Protein interactions for RNA: ENST00000488175.5

GCOM1-210, Transcript of GRINL1A complex locus 1, humanhuman

TSL 1 (best)

Gene GCOM1, Length 2,601 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCOM1-210ENST00000488175 FAM78BQ5VT40 261 aa13.74□□□□□ -0.21
GCOM1-210ENST00000488175 MRPL41Q8IXM3 137 aaKnown RBP13.74□□□□□ -0.21
GCOM1-210ENST00000488175 TMEM251Q8N6I4 163 aa13.74□□□□□ -0.21
GCOM1-210ENST00000488175 ZNF645Q8N7E2 425 aa13.74□□□□□ -0.21
GCOM1-210ENST00000488175 ZNF709Q8N972 641 aa13.74□□□□□ -0.21
GCOM1-210ENST00000488175 NEIL1Q96FI4 390 aaPredicted RBP13.74□□□□□ -0.21
GCOM1-210ENST00000488175 ACY3Q96HD9 319 aa13.74□□□□□ -0.21
GCOM1-210ENST00000488175 OR6C3Q9NZP0 311 aa13.74□□□□□ -0.21
GCOM1-210ENST00000488175 WIPI2Q9Y4P8 454 aa13.74□□□□□ -0.21
GCOM1-210ENST00000488175 A0A1B0GUS0 222 aa13.73□□□□□ -0.21
GCOM1-210ENST00000488175 PGPEP1LA6NFU8 196 aa13.73□□□□□ -0.21
GCOM1-210ENST00000488175 C12orf77C9JDV5 145 aa13.73□□□□□ -0.21
GCOM1-210ENST00000488175 SH2D1BO14796 132 aa13.73□□□□□ -0.21
GCOM1-210ENST00000488175 MPLP40238 635 aa13.73□□□□□ -0.21
GCOM1-210ENST00000488175 PLGLB1Q02325 96 aa13.73□□□□□ -0.21
GCOM1-210ENST00000488175 AESQ08117 197 aa13.73□□□□□ -0.21
GCOM1-210ENST00000488175 OR1C1Q15619 314 aa13.73□□□□□ -0.21
GCOM1-210ENST00000488175 ABHD17BQ5VST6 288 aa13.73□□□□□ -0.21
GCOM1-210ENST00000488175 ANAPC16Q96DE5 110 aa13.73□□□□□ -0.21
GCOM1-210ENST00000488175 DERL1Q9BUN8 251 aa13.73□□□□□ -0.21
GCOM1-210ENST00000488175 MANBALQ9NQG1 85 aa13.73□□□□□ -0.21
GCOM1-210ENST00000488175 LOXL2Q9Y4K0 774 aa13.73□□□□□ -0.21
GCOM1-210ENST00000488175 USF3Q68DE3 2245 aa13.73□□□□□ -0.21
GCOM1-210ENST00000488175 WNT9BO14905 357 aa13.73□□□□□ -0.21
GCOM1-210ENST00000488175 MBP02144 154 aa13.73□□□□□ -0.21
GCOM1-210ENST00000488175 TGIF2LXQ8IUE1 241 aa13.73□□□□□ -0.21
GCOM1-210ENST00000488175 GALMQ96C23 342 aa13.73□□□□□ -0.21
GCOM1-210ENST00000488175 KCNIP1Q9NZI2 227 aa13.73□□□□□ -0.21
GCOM1-210ENST00000488175 TNRC6BQ9UPQ9 1833 aaKnown RBP13.72□□□□□ -0.21
GCOM1-210ENST00000488175 TRAV38-1A0A0B4J264 116 aa13.72□□□□□ -0.21
GCOM1-210ENST00000488175 B4E171 279 aa13.72□□□□□ -0.21
GCOM1-210ENST00000488175 GGCTO75223 188 aaKnown RBP13.72□□□□□ -0.21
GCOM1-210ENST00000488175 P0C879 139 aa13.72□□□□□ -0.21
GCOM1-210ENST00000488175 RAC2P15153 192 aa13.72□□□□□ -0.21
GCOM1-210ENST00000488175 TSPAN7P41732 249 aa13.72□□□□□ -0.21
GCOM1-210ENST00000488175 PDLIM4P50479 330 aa13.72□□□□□ -0.21
GCOM1-210ENST00000488175 ATP6V1FQ16864 119 aa13.72□□□□□ -0.21
GCOM1-210ENST00000488175 CST9LP1Q5W188 147 aa13.72□□□□□ -0.21
GCOM1-210ENST00000488175 ZNF826PQ6ZT77 177 aa13.72□□□□□ -0.21
GCOM1-210ENST00000488175 TPRX1Q8N7U7 411 aa13.72□□□□□ -0.21
GCOM1-210ENST00000488175 C2orf88Q9BSF0 95 aa13.72□□□□□ -0.21
GCOM1-210ENST00000488175 GP6Q9HCN6 339 aa13.72□□□□□ -0.21
GCOM1-210ENST00000488175 POLDIP2Q9Y2S7 368 aa13.72□□□□□ -0.21
GCOM1-210ENST00000488175 GTF3C1Q12789 2109 aa13.72□□□□□ -0.21
GCOM1-210ENST00000488175 HAND1O96004 215 aa13.72□□□□□ -0.21
GCOM1-210ENST00000488175 GCGP01275 180 aa13.72□□□□□ -0.21
GCOM1-210ENST00000488175 ATP5G3P48201 142 aa13.72□□□□□ -0.21
GCOM1-210ENST00000488175 Q3ZCU0 254 aa13.72□□□□□ -0.21
GCOM1-210ENST00000488175 NDUFAF3Q9BU61 184 aa13.72□□□□□ -0.21
GCOM1-210ENST00000488175 IGHV3-43A0A0B4J1X8 118 aa13.71□□□□□ -0.21
GCOM1-210ENST00000488175 ST8SIA5O15466 376 aa13.71□□□□□ -0.21
GCOM1-210ENST00000488175 IGHV3-43DP0DP04 118 aa13.71□□□□□ -0.21
GCOM1-210ENST00000488175 ZNF146Q15072 292 aa13.71□□□□□ -0.21
GCOM1-210ENST00000488175 TMPRSS7Q7RTY8 843 aa13.71□□□□□ -0.21
GCOM1-210ENST00000488175 MRGPRDQ8TDS7 321 aa13.71□□□□□ -0.21
GCOM1-210ENST00000488175 TMEM18Q96B42 140 aa13.71□□□□□ -0.21
GCOM1-210ENST00000488175 NOL4LQ96MY1 436 aaPredicted RBP13.71□□□□□ -0.21
GCOM1-210ENST00000488175 DDA1Q9BW61 102 aa13.71□□□□□ -0.21
GCOM1-210ENST00000488175 COL6A3P12111 3177 aa13.71□□□□□ -0.21
GCOM1-210ENST00000488175 A0A0U1RQK1 487 aa13.71□□□□□ -0.22
GCOM1-210ENST00000488175 ZNF320A2RRD8 509 aa13.71□□□□□ -0.22
GCOM1-210ENST00000488175 DEFB108AA8MXU0 73 aa13.71□□□□□ -0.22
GCOM1-210ENST00000488175 NDUFB4O95168 129 aa13.71□□□□□ -0.22
GCOM1-210ENST00000488175 HBZP02008 142 aa13.71□□□□□ -0.22
GCOM1-210ENST00000488175 IL3RAP26951 378 aa13.71□□□□□ -0.22
GCOM1-210ENST00000488175 CDC34P49427 236 aaPredicted RBP13.71□□□□□ -0.22
GCOM1-210ENST00000488175 GNB1P62873 340 aa13.71□□□□□ -0.22
GCOM1-210ENST00000488175 H2BFWTQ7Z2G1 175 aa13.71□□□□□ -0.22
GCOM1-210ENST00000488175 RFESDQ8TAC1 157 aa13.71□□□□□ -0.22
GCOM1-210ENST00000488175 BCL2L2Q92843 193 aaPredicted RBP13.71□□□□□ -0.22
GCOM1-210ENST00000488175 PDGFBP01127 241 aaPredicted RBP13.7□□□□□ -0.22
GCOM1-210ENST00000488175 C1QTNF9P0C862 333 aa13.7□□□□□ -0.22
GCOM1-210ENST00000488175 PAX5Q02548 391 aa13.7□□□□□ -0.22
GCOM1-210ENST00000488175 LINC01551Q86U37 167 aa13.7□□□□□ -0.22
GCOM1-210ENST00000488175 Q8IYB0 196 aa13.7□□□□□ -0.22
GCOM1-210ENST00000488175 CISD2Q8N5K1 135 aaKnown RBP13.7□□□□□ -0.22
GCOM1-210ENST00000488175 ZNF114Q8NC26 417 aa13.7□□□□□ -0.22
GCOM1-210ENST00000488175 LURAP1Q96LR2 239 aa13.7□□□□□ -0.22
GCOM1-210ENST00000488175 TMEM204Q9BSN7 226 aa13.7□□□□□ -0.22
GCOM1-210ENST00000488175 EREGO14944 169 aa13.7□□□□□ -0.22
GCOM1-210ENST00000488175 SRP14P37108 136 aaKnown RBP13.7□□□□□ -0.22
GCOM1-210ENST00000488175 CNN1P51911 297 aaKnown RBP13.7□□□□□ -0.22
GCOM1-210ENST00000488175 EDDM3BP56851 147 aa13.7□□□□□ -0.22
GCOM1-210ENST00000488175 PPP1CBP62140 327 aa13.7□□□□□ -0.22
GCOM1-210ENST00000488175 SLC10A1Q14973 349 aa13.7□□□□□ -0.22
GCOM1-210ENST00000488175 ACOT6Q3I5F7 207 aaPredicted RBP13.7□□□□□ -0.22
GCOM1-210ENST00000488175 KCNIP4Q6PIL6 250 aa13.7□□□□□ -0.22
GCOM1-210ENST00000488175 TMEM256Q8N2U0 113 aa13.7□□□□□ -0.22
GCOM1-210ENST00000488175 PLPPR2Q96GM1 343 aa13.7□□□□□ -0.22
GCOM1-210ENST00000488175 ATG101Q9BSB4 218 aa13.7□□□□□ -0.22
GCOM1-210ENST00000488175 LINC00473A8K010 186 aa13.69□□□□□ -0.22
GCOM1-210ENST00000488175 LPAL2Q16609 132 aa13.69□□□□□ -0.22
GCOM1-210ENST00000488175 Q6ZR03 302 aa13.69□□□□□ -0.22
GCOM1-210ENST00000488175 PATZ1Q9HBE1 687 aaKnown RBP13.69□□□□□ -0.22
GCOM1-210ENST00000488175 TMEM30CPA0ZSE6 113 aa13.69□□□□□ -0.22
GCOM1-210ENST00000488175 NUPR1O60356 82 aa13.69□□□□□ -0.22
GCOM1-210ENST00000488175 VENTXO95231 258 aa13.69□□□□□ -0.22
GCOM1-210ENST00000488175 SCGB1D1O95968 90 aa13.69□□□□□ -0.22
GCOM1-210ENST00000488175 SSTR5P35346 364 aa13.69□□□□□ -0.22
GCOM1-210ENST00000488175 GABRA2P47869 451 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms