RNA–Protein interactions for RNA: ENST00000487222.5

EPHB4-206, Transcript of EPH receptor B4, humanhuman

TSL 1 (best)

Gene EPHB4, Length 5,058 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4-206ENST00000487222 C5orf52A6NGY3 159 aa12.63□□□□□ -0.39
EPHB4-206ENST00000487222 CLDN18P56856 261 aa12.63□□□□□ -0.39
EPHB4-206ENST00000487222 RPL8P62917 257 aaKnown RBP12.63□□□□□ -0.39
EPHB4-206ENST00000487222 SLC35B1P78383 322 aa12.63□□□□□ -0.39
EPHB4-206ENST00000487222 SRSF9Q13242 221 aaKnown RBP eCLIP12.63□□□□□ -0.39
EPHB4-206ENST00000487222 MIC13Q5XKP0 118 aa12.63□□□□□ -0.39
EPHB4-206ENST00000487222 ABLIM2Q6H8Q1 611 aa12.63□□□□□ -0.39
EPHB4-206ENST00000487222 OR8G5Q8NG78 346 aa12.63□□□□□ -0.39
EPHB4-206ENST00000487222 SBF2Q86WG5 1849 aa12.63□□□□□ -0.39
EPHB4-206ENST00000487222 ODAMA1E959 279 aa12.63□□□□□ -0.39
EPHB4-206ENST00000487222 PRR33A8MZF0 331 aa12.63□□□□□ -0.39
EPHB4-206ENST00000487222 AHRRA9YTQ3 701 aa12.63□□□□□ -0.39
EPHB4-206ENST00000487222 HOXD4P09016 255 aaPredicted RBP12.63□□□□□ -0.39
EPHB4-206ENST00000487222 HOXA4Q00056 320 aaPredicted RBP12.63□□□□□ -0.39
EPHB4-206ENST00000487222 C10orf128Q5T292 105 aa12.63□□□□□ -0.39
EPHB4-206ENST00000487222 GDF15Q99988 308 aa12.63□□□□□ -0.39
EPHB4-206ENST00000487222 OR51M1Q9H341 326 aa12.63□□□□□ -0.39
EPHB4-206ENST00000487222 CASP8AP2Q9UKL3 1982 aa12.63□□□□□ -0.39
EPHB4-206ENST00000487222 STAG3L2P0CL84 134 aa12.63□□□□□ -0.39
EPHB4-206ENST00000487222 ZNF708P17019 499 aa12.63□□□□□ -0.39
EPHB4-206ENST00000487222 C1orf185Q5T7R7 199 aa12.63□□□□□ -0.39
EPHB4-206ENST00000487222 RBPMS2Q6ZRY4 209 aaKnown RBP12.63□□□□□ -0.39
EPHB4-206ENST00000487222 CALHM1Q8IU99 346 aa12.63□□□□□ -0.39
EPHB4-206ENST00000487222 RARRES2Q99969 163 aa12.63□□□□□ -0.39
EPHB4-206ENST00000487222 DDA1Q9BW61 102 aa12.63□□□□□ -0.39
EPHB4-206ENST00000487222 AP5S1Q9NUS5 200 aa12.63□□□□□ -0.39
EPHB4-206ENST00000487222 ALPK2Q86TB3 2170 aa12.63□□□□□ -0.39
EPHB4-206ENST00000487222 TMEM140Q9NV12 185 aa12.63□□□□□ -0.39
EPHB4-206ENST00000487222 PILRBQ9UKJ0 227 aa12.63□□□□□ -0.39
EPHB4-206ENST00000487222 A0A0G2JK05 382 aa12.62□□□□□ -0.39
EPHB4-206ENST00000487222 DLL1O00548 723 aa12.62□□□□□ -0.39
EPHB4-206ENST00000487222 ZNF207O43670 478 aaKnown RBP12.62□□□□□ -0.39
EPHB4-206ENST00000487222 NAT2P11245 290 aa12.62□□□□□ -0.39
EPHB4-206ENST00000487222 ERVFRD-1P60508 538 aa12.62□□□□□ -0.39
EPHB4-206ENST00000487222 HSPE1P61604 102 aaKnown RBP12.62□□□□□ -0.39
EPHB4-206ENST00000487222 SMIM8Q96KF7 97 aa12.62□□□□□ -0.39
EPHB4-206ENST00000487222 WNT5BQ9H1J7 359 aa12.62□□□□□ -0.39
EPHB4-206ENST00000487222 TGIF2-C20orf24A0A0A6YYL0 155 aa12.62□□□□□ -0.39
EPHB4-206ENST00000487222 KLF7O75840 302 aaPredicted RBP12.62□□□□□ -0.39
EPHB4-206ENST00000487222 FAM209BQ5JX69 171 aa12.62□□□□□ -0.39
EPHB4-206ENST00000487222 ZNF385CQ66K41 422 aaPredicted RBP12.62□□□□□ -0.39
EPHB4-206ENST00000487222 MMD2Q8IY49 270 aa12.62□□□□□ -0.39
EPHB4-206ENST00000487222 OR4B1Q8NGF8 309 aa12.62□□□□□ -0.39
EPHB4-206ENST00000487222 ITLN1Q8WWA0 313 aa12.62□□□□□ -0.39
EPHB4-206ENST00000487222 SH3BGRL3Q9H299 93 aa12.62□□□□□ -0.39
EPHB4-206ENST00000487222 GREB1LQ9C091 1923 aaPredicted RBP12.62□□□□□ -0.39
EPHB4-206ENST00000487222 GPHA2Q96T91 129 aa12.62□□□□□ -0.39
EPHB4-206ENST00000487222 J3KRW8 73 aa12.62□□□□□ -0.39
EPHB4-206ENST00000487222 RECKO95980 971 aa12.62□□□□□ -0.39
EPHB4-206ENST00000487222 ID4P47928 161 aa12.62□□□□□ -0.39
EPHB4-206ENST00000487222 STPG1Q5TH74 334 aa12.62□□□□□ -0.39
EPHB4-206ENST00000487222 SPANXN1Q5VSR9 72 aa12.62□□□□□ -0.39
EPHB4-206ENST00000487222 TMEM45BQ96B21 275 aa12.62□□□□□ -0.39
EPHB4-206ENST00000487222 WNK3Q9BYP7 1800 aa12.62□□□□□ -0.39
EPHB4-206ENST00000487222 MARCH11A6NNE9 402 aa12.61□□□□□ -0.39
EPHB4-206ENST00000487222 AGAP20933 346 aa12.61□□□□□ -0.39
EPHB4-206ENST00000487222 CDX1P47902 265 aaPredicted RBP12.61□□□□□ -0.39
EPHB4-206ENST00000487222 ZP1P60852 638 aa12.61□□□□□ -0.39
EPHB4-206ENST00000487222 ZNF658BQ4V348 819 aaPredicted RBP12.61□□□□□ -0.39
EPHB4-206ENST00000487222 CHRNA10Q9GZZ6 450 aa12.61□□□□□ -0.39
EPHB4-206ENST00000487222 ZNF430Q9H8G1 570 aaPredicted RBP12.61□□□□□ -0.39
EPHB4-206ENST00000487222 DLX1P56177 255 aa12.61□□□□□ -0.39
EPHB4-206ENST00000487222 PMCHL1Q16048 86 aa12.61□□□□□ -0.39
EPHB4-206ENST00000487222 ZNF818PQ6ZRF7 136 aa12.61□□□□□ -0.39
EPHB4-206ENST00000487222 HIST1H2BAQ96A08 127 aa12.61□□□□□ -0.39
EPHB4-206ENST00000487222 CALYQ9NYX4 217 aa12.61□□□□□ -0.39
EPHB4-206ENST00000487222 A0A1W2PR77 199 aa12.61□□□□□ -0.39
EPHB4-206ENST00000487222 MGPP08493 103 aa12.61□□□□□ -0.39
EPHB4-206ENST00000487222 KCNMB1Q16558 191 aa12.61□□□□□ -0.39
EPHB4-206ENST00000487222 ECSCRQ19T08 205 aa12.61□□□□□ -0.39
EPHB4-206ENST00000487222 OPN3Q9H1Y3 402 aaPredicted RBP12.61□□□□□ -0.39
EPHB4-206ENST00000487222 COL25A1Q9BXS0 654 aaPredicted RBP12.61□□□□□ -0.39
EPHB4-206ENST00000487222 GPR61Q9BZJ8 451 aa12.61□□□□□ -0.39
EPHB4-206ENST00000487222 TMEM189A5PLL7 270 aa12.6□□□□□ -0.39
EPHB4-206ENST00000487222 ZNHIT1O43257 154 aa12.6□□□□□ -0.39
EPHB4-206ENST00000487222 ZG16O60844 167 aa12.6□□□□□ -0.39
EPHB4-206ENST00000487222 COX6A1P12074 109 aa12.6□□□□□ -0.39
EPHB4-206ENST00000487222 KIR2DL2P43627 348 aaPredicted RBP12.6□□□□□ -0.39
EPHB4-206ENST00000487222 JPT1Q9UK76 154 aa12.6□□□□□ -0.39
EPHB4-206ENST00000487222 KCNMB2Q9Y691 235 aa12.6□□□□□ -0.39
EPHB4-206ENST00000487222 IGKV3-7A0A075B6H7 116 aa12.6□□□□□ -0.39
EPHB4-206ENST00000487222 PTGDSP41222 190 aa12.6□□□□□ -0.39
EPHB4-206ENST00000487222 PCOLCEQ15113 449 aa12.6□□□□□ -0.39
EPHB4-206ENST00000487222 PSMG3Q9BT73 122 aaPredicted RBP12.6□□□□□ -0.39
EPHB4-206ENST00000487222 SRXN1Q9BYN0 137 aa12.6□□□□□ -0.39
EPHB4-206ENST00000487222 PGPA6NDG6 321 aa12.6□□□□□ -0.39
EPHB4-206ENST00000487222 WDR25Q64LD2 544 aaPredicted RBP12.6□□□□□ -0.39
EPHB4-206ENST00000487222 TMEM54Q969K7 222 aa12.6□□□□□ -0.39
EPHB4-206ENST00000487222 SPSB2Q99619 263 aa12.6□□□□□ -0.39
EPHB4-206ENST00000487222 MRPL18Q9H0U6 180 aaKnown RBP12.6□□□□□ -0.39
EPHB4-206ENST00000487222 NPIPB9F8W1W9 429 aa12.6□□□□□ -0.39
EPHB4-206ENST00000487222 SNRPCP09234 159 aaKnown RBP12.6□□□□□ -0.39
EPHB4-206ENST00000487222 FTH1P19P0C7X4 201 aa12.6□□□□□ -0.39
EPHB4-206ENST00000487222 GLIPR1P48060 266 aa12.6□□□□□ -0.39
EPHB4-206ENST00000487222 NPBWR2P48146 333 aa12.6□□□□□ -0.39
EPHB4-206ENST00000487222 RBBP6Q7Z6E9 1792 aaKnown RBP12.59□□□□□ -0.39
EPHB4-206ENST00000487222 A0A1W2PQM1 296 aa12.59□□□□□ -0.39
EPHB4-206ENST00000487222 C8orf88P0DMB2 117 aa12.59□□□□□ -0.39
EPHB4-206ENST00000487222 CEBPDP49716 269 aaPredicted RBP12.59□□□□□ -0.39
EPHB4-206ENST00000487222 FHITP49789 147 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms