RNA–Protein interactions for RNA: ENST00000487010.1

COL3A1-206, Transcript of collagen type III alpha 1 chain, humanhuman

TSL 2

Gene COL3A1, Length 2,054 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-206ENST00000487010 LINC01551Q86U37 167 aa10.24□□□□□ -0.77
COL3A1-206ENST00000487010 ZNF808Q8N4W9 903 aaPredicted RBP10.24□□□□□ -0.77
COL3A1-206ENST00000487010 OR5T1Q8NG75 326 aa10.24□□□□□ -0.77
COL3A1-206ENST00000487010 GALMQ96C23 342 aa10.24□□□□□ -0.77
COL3A1-206ENST00000487010 HES7Q9BYE0 225 aa10.24□□□□□ -0.77
COL3A1-206ENST00000487010 C17orf98A8MV24 154 aa10.23□□□□□ -0.77
COL3A1-206ENST00000487010 CDIPTO14735 213 aa10.23□□□□□ -0.77
COL3A1-206ENST00000487010 RAB29O14966 203 aa10.23□□□□□ -0.77
COL3A1-206ENST00000487010 CLDN14O95500 239 aa10.23□□□□□ -0.77
COL3A1-206ENST00000487010 DEFA4P12838 97 aa10.23□□□□□ -0.77
COL3A1-206ENST00000487010 MPLP40238 635 aa10.23□□□□□ -0.77
COL3A1-206ENST00000487010 OR3A1P47881 315 aa10.23□□□□□ -0.77
COL3A1-206ENST00000487010 RAB4BP61018 213 aa10.23□□□□□ -0.77
COL3A1-206ENST00000487010 RPL15P61313 204 aaKnown RBP10.23□□□□□ -0.77
COL3A1-206ENST00000487010 CATR1Q13166 79 aa10.23□□□□□ -0.77
COL3A1-206ENST00000487010 ZNF124Q15973 351 aa10.23□□□□□ -0.77
COL3A1-206ENST00000487010 C6orf15Q6UXA7 325 aaPredicted RBP10.23□□□□□ -0.77
COL3A1-206ENST00000487010 TIPARPQ7Z3E1 657 aaKnown RBP10.23□□□□□ -0.77
COL3A1-206ENST00000487010 MDP1Q86V88 176 aa10.23□□□□□ -0.77
COL3A1-206ENST00000487010 DIRC2Q96SL1 478 aa10.23□□□□□ -0.77
COL3A1-206ENST00000487010 NEU1Q99519 415 aa10.23□□□□□ -0.77
COL3A1-206ENST00000487010 PLA2G3Q9NZ20 509 aa10.23□□□□□ -0.77
COL3A1-206ENST00000487010 DIDO1Q9BTC0 2240 aaKnown RBP10.23□□□□□ -0.77
COL3A1-206ENST00000487010 TMEM30CPA0ZSE6 113 aa10.22□□□□□ -0.77
COL3A1-206ENST00000487010 C12orf77C9JDV5 145 aa10.22□□□□□ -0.77
COL3A1-206ENST00000487010 TCAPO15273 167 aa10.22□□□□□ -0.77
COL3A1-206ENST00000487010 TMPRSS2O15393 492 aa10.22□□□□□ -0.77
COL3A1-206ENST00000487010 PDE6DO43924 150 aa10.22□□□□□ -0.77
COL3A1-206ENST00000487010 NUTF2P61970 127 aaKnown RBP10.22□□□□□ -0.77
COL3A1-206ENST00000487010 GNB1P62873 340 aa10.22□□□□□ -0.77
COL3A1-206ENST00000487010 FAM53AQ6NSI3 398 aaPredicted RBP10.22□□□□□ -0.77
COL3A1-206ENST00000487010 TMEM144Q7Z5S9 345 aa10.22□□□□□ -0.77
COL3A1-206ENST00000487010 MCEMP1Q8IX19 187 aa10.22□□□□□ -0.77
COL3A1-206ENST00000487010 OR52L2PQ8NGH6 319 aa10.22□□□□□ -0.77
COL3A1-206ENST00000487010 MAFAQ8NHW3 353 aaPredicted RBP10.22□□□□□ -0.77
COL3A1-206ENST00000487010 BCL2L2Q92843 193 aaPredicted RBP10.22□□□□□ -0.77
COL3A1-206ENST00000487010 IMMP2LQ96T52 175 aa10.22□□□□□ -0.77
COL3A1-206ENST00000487010 TTTY12Q9BZ98 90 aa10.22□□□□□ -0.77
COL3A1-206ENST00000487010 TRAPPC1Q9Y5R8 145 aa10.22□□□□□ -0.77
COL3A1-206ENST00000487010 A0A0U1RQK1 487 aa10.22□□□□□ -0.77
COL3A1-206ENST00000487010 ZNF320A2RRD8 509 aa10.22□□□□□ -0.77
COL3A1-206ENST00000487010 EREGO14944 169 aa10.22□□□□□ -0.77
COL3A1-206ENST00000487010 PSPNO60542 156 aa10.22□□□□□ -0.77
COL3A1-206ENST00000487010 HAND1O96004 215 aa10.22□□□□□ -0.77
COL3A1-206ENST00000487010 PDGFBP01127 241 aaPredicted RBP10.22□□□□□ -0.77
COL3A1-206ENST00000487010 CRYAAP02489 173 aa10.22□□□□□ -0.77
COL3A1-206ENST00000487010 CEBPDP49716 269 aaPredicted RBP10.22□□□□□ -0.77
COL3A1-206ENST00000487010 PPP1CBP62140 327 aa10.22□□□□□ -0.77
COL3A1-206ENST00000487010 TMEM249Q2WGJ8 235 aa10.22□□□□□ -0.77
COL3A1-206ENST00000487010 H2BFWTQ7Z2G1 175 aa10.22□□□□□ -0.77
COL3A1-206ENST00000487010 Q8N7P7 452 aa10.22□□□□□ -0.77
COL3A1-206ENST00000487010 HLA-CQ95604 372 aa10.22□□□□□ -0.77
COL3A1-206ENST00000487010 WDYHV1Q96HA8 205 aa10.22□□□□□ -0.77
COL3A1-206ENST00000487010 BTF3L4Q96K17 158 aa10.22□□□□□ -0.77
COL3A1-206ENST00000487010 C12orf49Q9H741 205 aa10.22□□□□□ -0.77
COL3A1-206ENST00000487010 WASF3Q9UPY6 502 aa10.22□□□□□ -0.77
COL3A1-206ENST00000487010 PXMP4Q9Y6I8 212 aa10.22□□□□□ -0.77
COL3A1-206ENST00000487010 DOCK11Q5JSL3 2073 aa10.21□□□□□ -0.77
COL3A1-206ENST00000487010 EGR1P18146 543 aa10.21□□□□□ -0.77
COL3A1-206ENST00000487010 ATP5G3P48201 142 aa10.21□□□□□ -0.77
COL3A1-206ENST00000487010 ZXDAP98168 799 aa10.21□□□□□ -0.77
COL3A1-206ENST00000487010 FOXL1Q12952 345 aa10.21□□□□□ -0.77
COL3A1-206ENST00000487010 C3AR1Q16581 482 aa10.21□□□□□ -0.77
COL3A1-206ENST00000487010 TBC1D28Q2M2D7 210 aa10.21□□□□□ -0.77
COL3A1-206ENST00000487010 SPINK9Q5DT21 86 aa10.21□□□□□ -0.77
COL3A1-206ENST00000487010 BTNL3Q6UXE8 466 aa10.21□□□□□ -0.77
COL3A1-206ENST00000487010 TCTEX1D1Q8N7M0 179 aa10.21□□□□□ -0.77
COL3A1-206ENST00000487010 NANOS1Q8WY41 292 aaKnown RBP10.21□□□□□ -0.77
COL3A1-206ENST00000487010 WFIKKN1Q96NZ8 548 aa10.21□□□□□ -0.77
COL3A1-206ENST00000487010 KCNIP2Q9NS61 270 aa10.21□□□□□ -0.77
COL3A1-206ENST00000487010 FKBP11Q9NYL4 201 aa10.21□□□□□ -0.77
COL3A1-206ENST00000487010 IGHV3-64DA0A0J9YX35 117 aa10.21□□□□□ -0.78
COL3A1-206ENST00000487010 OOEPA6NGQ2 149 aa10.21□□□□□ -0.78
COL3A1-206ENST00000487010 C15orf62A8K5M9 175 aa10.21□□□□□ -0.78
COL3A1-206ENST00000487010 NDUFB4O95168 129 aa10.21□□□□□ -0.78
COL3A1-206ENST00000487010 HBZP02008 142 aa10.21□□□□□ -0.78
COL3A1-206ENST00000487010 ZNF766Q5HY98 468 aa10.21□□□□□ -0.78
COL3A1-206ENST00000487010 ABHD17BQ5VST6 288 aa10.21□□□□□ -0.78
COL3A1-206ENST00000487010 CST9LP1Q5W188 147 aa10.21□□□□□ -0.78
COL3A1-206ENST00000487010 TEX38Q6PEX7 206 aa10.21□□□□□ -0.78
COL3A1-206ENST00000487010 TMEM251Q8N6I4 163 aa10.21□□□□□ -0.78
COL3A1-206ENST00000487010 RAB1CQ92928 201 aa10.21□□□□□ -0.78
COL3A1-206ENST00000487010 TAAR6Q96RI8 345 aa10.21□□□□□ -0.78
COL3A1-206ENST00000487010 OR2J1Q9GZK6 312 aa10.21□□□□□ -0.78
COL3A1-206ENST00000487010 AURKAIP1Q9NWT8 199 aaPredicted RBP10.21□□□□□ -0.78
COL3A1-206ENST00000487010 WDR83OSQ9Y284 106 aa10.21□□□□□ -0.78
COL3A1-206ENST00000487010 LOXL2Q9Y4K0 774 aa10.21□□□□□ -0.78
COL3A1-206ENST00000487010 TRAV38-1A0A0B4J264 116 aa10.2□□□□□ -0.78
COL3A1-206ENST00000487010 F6UZH7 168 aa10.2□□□□□ -0.78
COL3A1-206ENST00000487010 J3QW42 95 aa10.2□□□□□ -0.78
COL3A1-206ENST00000487010 IFNL4K9M1U5 179 aa10.2□□□□□ -0.78
COL3A1-206ENST00000487010 RBMXL2O75526 392 aaKnown RBP10.2□□□□□ -0.78
COL3A1-206ENST00000487010 SCGB1D1O95968 90 aa10.2□□□□□ -0.78
COL3A1-206ENST00000487010 GRPP07492 148 aa10.2□□□□□ -0.78
COL3A1-206ENST00000487010 C1QTNF9P0C862 333 aa10.2□□□□□ -0.78
COL3A1-206ENST00000487010 CD82P27701 267 aa10.2□□□□□ -0.78
COL3A1-206ENST00000487010 UBE2G2P60604 165 aa10.2□□□□□ -0.78
COL3A1-206ENST00000487010 ERVFC1-1P60608 527 aa10.2□□□□□ -0.78
COL3A1-206ENST00000487010 OR1C1Q15619 314 aa10.2□□□□□ -0.78
COL3A1-206ENST00000487010 ALKBH6Q3KRA9 238 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms