RNA–Protein interactions for RNA: ENST00000486704.1

HDAC8-218, Transcript of histone deacetylase 8, humanhuman

TSL 2

Gene HDAC8, Length 330 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-218ENST00000486704 C8orf86Q6ZUL3 223 aa12.49□□□□□ -0.41
HDAC8-218ENST00000486704 OR13F1Q8NGS4 319 aa12.49□□□□□ -0.41
HDAC8-218ENST00000486704 RCC1LQ96I51 464 aaKnown RBP12.49□□□□□ -0.41
HDAC8-218ENST00000486704 FUNDC2Q9BWH2 189 aa12.49□□□□□ -0.41
HDAC8-218ENST00000486704 PARP11Q9NR21 331 aa12.49□□□□□ -0.41
HDAC8-218ENST00000486704 DIABLOQ9NR28 239 aa12.49□□□□□ -0.41
HDAC8-218ENST00000486704 SLC35D1Q9NTN3 355 aa12.49□□□□□ -0.41
HDAC8-218ENST00000486704 ANXA10Q9UJ72 324 aa12.49□□□□□ -0.41
HDAC8-218ENST00000486704 TRAV18A0A075B6X5 111 aa12.48□□□□□ -0.41
HDAC8-218ENST00000486704 TRAV41A0A0B4J266 112 aa12.48□□□□□ -0.41
HDAC8-218ENST00000486704 DUS4LO95620 317 aaKnown RBP12.48□□□□□ -0.41
HDAC8-218ENST00000486704 IGLV1-40P01703 118 aa12.48□□□□□ -0.41
HDAC8-218ENST00000486704 SMIM18P0DKX4 95 aa12.48□□□□□ -0.41
HDAC8-218ENST00000486704 MYCNOSP40205 109 aa12.48□□□□□ -0.41
HDAC8-218ENST00000486704 LINC00205P59089 165 aa12.48□□□□□ -0.41
HDAC8-218ENST00000486704 LSM3P62310 102 aaKnown RBP12.48□□□□□ -0.41
HDAC8-218ENST00000486704 CX3CL1P78423 397 aa12.48□□□□□ -0.41
HDAC8-218ENST00000486704 PLGLAQ15195 96 aa12.48□□□□□ -0.41
HDAC8-218ENST00000486704 OXLD1Q5BKU9 147 aa12.48□□□□□ -0.41
HDAC8-218ENST00000486704 UBE2NLQ5JXB2 153 aa12.48□□□□□ -0.41
HDAC8-218ENST00000486704 C18orf65Q6ZTR6 163 aa12.48□□□□□ -0.41
HDAC8-218ENST00000486704 TCTEX1D1Q8N7M0 179 aa12.48□□□□□ -0.41
HDAC8-218ENST00000486704 MINDY2Q8NBR6 621 aa12.48□□□□□ -0.41
HDAC8-218ENST00000486704 DDB2Q92466 427 aa12.48□□□□□ -0.41
HDAC8-218ENST00000486704 FLYWCH2Q96CP2 140 aaKnown RBP12.48□□□□□ -0.41
HDAC8-218ENST00000486704 KCTD12Q96CX2 325 aaKnown RBP12.48□□□□□ -0.41
HDAC8-218ENST00000486704 ADTRPQ96IZ2 230 aa12.48□□□□□ -0.41
HDAC8-218ENST00000486704 P2RX4Q99571 388 aa12.48□□□□□ -0.41
HDAC8-218ENST00000486704 AUNIPQ9H7T9 357 aa12.48□□□□□ -0.41
HDAC8-218ENST00000486704 METTL1Q9UBP6 276 aaKnown RBP12.48□□□□□ -0.41
HDAC8-218ENST00000486704 OR2W1Q9Y3N9 320 aa12.48□□□□□ -0.41
HDAC8-218ENST00000486704 RBM7Q9Y580 266 aaKnown RBP12.48□□□□□ -0.41
HDAC8-218ENST00000486704 PRKDCP78527 4128 aaKnown RBP12.47□□□□□ -0.41
HDAC8-218ENST00000486704 G3V318 75 aa12.47□□□□□ -0.41
HDAC8-218ENST00000486704 HLA-DQB1P01920 261 aa12.47□□□□□ -0.41
HDAC8-218ENST00000486704 RRASP10301 218 aa12.47□□□□□ -0.41
HDAC8-218ENST00000486704 RPS16P62249 146 aaKnown RBP12.47□□□□□ -0.41
HDAC8-218ENST00000486704 CBX3Q13185 183 aa12.47□□□□□ -0.41
HDAC8-218ENST00000486704 RTL8BQ17RB0 113 aa12.47□□□□□ -0.41
HDAC8-218ENST00000486704 TMEM177Q53S58 311 aa12.47□□□□□ -0.41
HDAC8-218ENST00000486704 REC114Q7Z4M0 266 aa12.47□□□□□ -0.41
HDAC8-218ENST00000486704 MRPL41Q8IXM3 137 aaKnown RBP12.47□□□□□ -0.41
HDAC8-218ENST00000486704 ZNF645Q8N7E2 425 aa12.47□□□□□ -0.41
HDAC8-218ENST00000486704 SLC25A46Q96AG3 418 aa12.47□□□□□ -0.41
HDAC8-218ENST00000486704 FBXO7Q9Y3I1 522 aa12.47□□□□□ -0.41
HDAC8-218ENST00000486704 WSB1Q9Y6I7 421 aa12.47□□□□□ -0.41
HDAC8-218ENST00000486704 XRCC3O43542 346 aa12.46□□□□□ -0.41
HDAC8-218ENST00000486704 TUSC2O75896 110 aa12.46□□□□□ -0.41
HDAC8-218ENST00000486704 SLC22A5O76082 557 aa12.46□□□□□ -0.41
HDAC8-218ENST00000486704 IGLV2-23P01705 113 aa12.46□□□□□ -0.41
HDAC8-218ENST00000486704 IGLL1P15814 213 aa12.46□□□□□ -0.41
HDAC8-218ENST00000486704 DUTP33316 252 aaKnown RBP12.46□□□□□ -0.41
HDAC8-218ENST00000486704 LGALS7P47929 136 aa12.46□□□□□ -0.41
HDAC8-218ENST00000486704 LUMP51884 338 aaPredicted RBP12.46□□□□□ -0.41
HDAC8-218ENST00000486704 ZNF562Q6V9R5 426 aa12.46□□□□□ -0.41
HDAC8-218ENST00000486704 LCNL1Q6ZST4 164 aa12.46□□□□□ -0.41
HDAC8-218ENST00000486704 HOGA1Q86XE5 327 aa12.46□□□□□ -0.41
HDAC8-218ENST00000486704 BEST4Q8NFU0 473 aa12.46□□□□□ -0.41
HDAC8-218ENST00000486704 C4orf3Q8WVX3 66 aa12.46□□□□□ -0.41
HDAC8-218ENST00000486704 HARBI1Q96MB7 349 aa12.46□□□□□ -0.41
HDAC8-218ENST00000486704 DNAH3Q8TD57 4116 aa12.46□□□□□ -0.41
HDAC8-218ENST00000486704 FCN1O00602 326 aa12.45□□□□□ -0.42
HDAC8-218ENST00000486704 SLC25A17O43808 307 aa12.45□□□□□ -0.42
HDAC8-218ENST00000486704 CA2P00918 260 aa12.45□□□□□ -0.42
HDAC8-218ENST00000486704 EGR2P11161 476 aaPredicted RBP12.45□□□□□ -0.42
HDAC8-218ENST00000486704 NFYAP23511 347 aaPredicted RBP12.45□□□□□ -0.42
HDAC8-218ENST00000486704 CBX5P45973 191 aa12.45□□□□□ -0.42
HDAC8-218ENST00000486704 NCS1P62166 190 aa12.45□□□□□ -0.42
HDAC8-218ENST00000486704 PPP1R27Q86WC6 154 aa12.45□□□□□ -0.42
HDAC8-218ENST00000486704 SAMD12Q8N8I0 201 aa12.45□□□□□ -0.42
HDAC8-218ENST00000486704 S100A16Q96FQ6 103 aaKnown RBP12.45□□□□□ -0.42
HDAC8-218ENST00000486704 RAX2Q96IS3 184 aa12.45□□□□□ -0.42
HDAC8-218ENST00000486704 UBE2E2Q96LR5 201 aa12.45□□□□□ -0.42
HDAC8-218ENST00000486704 GPR61Q9BZJ8 451 aa12.45□□□□□ -0.42
HDAC8-218ENST00000486704 TPSG1Q9NRR2 321 aa12.45□□□□□ -0.42
HDAC8-218ENST00000486704 NECAP2Q9NVZ3 263 aa12.45□□□□□ -0.42
HDAC8-218ENST00000486704 FOXA2Q9Y261 457 aaPredicted RBP12.45□□□□□ -0.42
HDAC8-218ENST00000486704 NUBP2Q9Y5Y2 271 aa12.45□□□□□ -0.42
HDAC8-218ENST00000486704 TGP01266 2768 aa12.44□□□□□ -0.42
HDAC8-218ENST00000486704 IGKV1D-13A0A0B4J2D9 117 aa12.44□□□□□ -0.42
HDAC8-218ENST00000486704 LINC00473A8K010 186 aa12.44□□□□□ -0.42
HDAC8-218ENST00000486704 CCL24O00175 119 aa12.44□□□□□ -0.42
HDAC8-218ENST00000486704 GABARAPO95166 117 aa12.44□□□□□ -0.42
HDAC8-218ENST00000486704 IGLV2-14P01704 120 aa12.44□□□□□ -0.42
HDAC8-218ENST00000486704 CRYGBP07316 175 aa12.44□□□□□ -0.42
HDAC8-218ENST00000486704 IGKV1-13P0DP09 117 aa12.44□□□□□ -0.42
HDAC8-218ENST00000486704 ARPC4P59998 168 aa12.44□□□□□ -0.42
HDAC8-218ENST00000486704 RUNX1Q01196 453 aa12.44□□□□□ -0.42
HDAC8-218ENST00000486704 TMEM267Q0VDI3 215 aaPredicted RBP12.44□□□□□ -0.42
HDAC8-218ENST00000486704 FHL3Q13643 280 aa12.44□□□□□ -0.42
HDAC8-218ENST00000486704 KIAA0141Q14154 515 aaPredicted RBP12.44□□□□□ -0.42
HDAC8-218ENST00000486704 MSMO1Q15800 293 aa12.44□□□□□ -0.42
HDAC8-218ENST00000486704 ECSCRQ19T08 205 aa12.44□□□□□ -0.42
HDAC8-218ENST00000486704 AKIRIN2Q53H80 203 aa12.44□□□□□ -0.42
HDAC8-218ENST00000486704 PYHIN1Q6K0P9 492 aa12.44□□□□□ -0.42
HDAC8-218ENST00000486704 TMEM65Q6PI78 240 aa12.44□□□□□ -0.42
HDAC8-218ENST00000486704 OVCH2Q7RTZ1 564 aa12.44□□□□□ -0.42
HDAC8-218ENST00000486704 GVQW1Q8N7I0 195 aa12.44□□□□□ -0.42
HDAC8-218ENST00000486704 BVESQ8NE79 360 aa12.44□□□□□ -0.42
HDAC8-218ENST00000486704 ARPC1AQ92747 370 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms